| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is hipA [C]
Identifier: 66046155
GI number: 66046155
Start: 3512951
End: 3514246
Strand: Reverse
Name: hipA [C]
Synonym: Psyr_2924
Alternate gene names: 66046155
Gene position: 3514246-3512951 (Counterclockwise)
Preceding gene: 66046156
Following gene: 66046146
Centisome position: 57.67
GC content: 58.49
Gene sequence:
>1296_bases ATGCTTGAGCAGGTTAACGTCTTCTACGAGGGCTGGGGTGAGCGATGGCAGTGGGGCACGCTGGTCTCGACGACCGCTTT GACCGGTCGCCCGCTGATCGTGTTCGAATACAGCAATGAAGCCAGACAAACGGGCCTGGAACTGTCCTCCTATACGCTGC CCCTGGAGGGGGACAGGTTGCGTCGAGACTTCCCGGACCATCAGCTGTACTTGCCAGGGCCTGTTTACGACTCGTTGCCG GATGGATGGGGCATGTTGTTGATGGACCGTCTTTTCAGGCGCCGCGGGCTCACCACCGCGCGCATCGGCCCTCTGGAGCG GCTGGCCTATATCGGTAGCAGTGCAATGGGCGCCATGTCGTTTGAGCCCGTGGCGCCCGAAGGGCAGGAATCTGACGTCC ACATCCCGCTGGAACAGCTCGCCGCCGACGTGAAGCAAGTACTGCATGGAAACGGTGGTGAGTTCCTGCAGGCATTGCTG CTGGTGGGTGGCTCGCCTCAAGGTGCAAGGCCCAAGGCTCTCGTCTATCGCGATCCTGAAACTGGCGGGTTTACCACTGC TGCTACGCCGGGCTTCGAAGCATGGTTGATCAAGTTTCCGGCCAAAGAAGAACATGCAGAAGTGTGCGCCATCGAAATGG TCTACGCCGAGTGCCTGCGCATGTGCGGTATCGAGACCCCTGACACCCAGTACTTAAATCTGCCTGATGGCCTGGCAGCG TTTGCCAGTAAGCGATTTGACCGCCGCGGTGGTCTACGTATACCCATGCAAAGCCTGGCCGCCTTTACGGGGGCAAATTA CCAGTCTCCGGGTGTGTTGGACTACGTCAACTTTTTGCGGGCAACACAGATGTGTACCAACGATGTACGAGAGATGGCAC GCGCGTTCGAACGTGCCGTTTTTAACGTTGCGTTCAACAACCGAGACGATCATCCCAAGAATTTCGCCTACATCATGTCG CAGGACGGTCAGTGGCGACTGTCGCCGGCTTACGACGTAACCTTCTGCGAGGGGCCAAGCGGATACCATCAGATGGACGT GATGGGAGAGGCGCTGGAGATTTCCCGTGCGCAAATGCTTCGGCTTGCCGAGGAAGCCGAGATGTCCCCGGACGCTGCAA CCGGAGTGATTGACGGCATGTGTGATGTAGCGAGCCGGTTTACAGCCATCGCCGAGAACCTGTGCCCGCAGGTTATTACT CTAGACACCCTGCGCATGATCCAAAGCCGCATTGATCAGAACGTAGCCCGGTTACACCACAGTCAGGCCGACGGCGGTCA CGGGCGATTCTCATAA
Upstream 100 bases:
>100_bases GAACTCGAAGGCCTGTTTCTGCCAAAGCTGGACAGCATCGAAGACATTCGACGCTACGAAAACAGCGCCAATCGTCTCCG TACAAAGAGGAAGTCCGGCG
Downstream 100 bases:
>100_bases ACGATGCTGCCGTATGCTTCGAGCGCTCAGGGCCGTGTGCAAGACTTTGAGCATCCGCAAAGTTGCCCTGTCATTACCTT CATCACGGTGTAGCGCGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: HipA Domain Protein; Xin-Antitoxin System Toxin Component HipA Family; HipA Protein; Hipa Domain Protein; HipA-Like C-Terminal Domain Family; HipA-Like Protein; Protein With HipA-Like Domain; HipA-Family Phosphatidylinositol 3/4-Kinase; Hipa Protein; Protein Containing HipA-Like C-Terminal Domain; Transcriptional Regulator; Amidophosphoribosyl Transferase; HipA-Like N-Terminal Domain Family; HIPA Protein; HipA Family Protein; Conserved Protein; Capsule Biosynthesis Protein HipA; Capsule Biosynthesis -Like Protein; Orf_Bo
Number of amino acids: Translated: 431; Mature: 431
Protein sequence:
>431_residues MLEQVNVFYEGWGERWQWGTLVSTTALTGRPLIVFEYSNEARQTGLELSSYTLPLEGDRLRRDFPDHQLYLPGPVYDSLP DGWGMLLMDRLFRRRGLTTARIGPLERLAYIGSSAMGAMSFEPVAPEGQESDVHIPLEQLAADVKQVLHGNGGEFLQALL LVGGSPQGARPKALVYRDPETGGFTTAATPGFEAWLIKFPAKEEHAEVCAIEMVYAECLRMCGIETPDTQYLNLPDGLAA FASKRFDRRGGLRIPMQSLAAFTGANYQSPGVLDYVNFLRATQMCTNDVREMARAFERAVFNVAFNNRDDHPKNFAYIMS QDGQWRLSPAYDVTFCEGPSGYHQMDVMGEALEISRAQMLRLAEEAEMSPDAATGVIDGMCDVASRFTAIAENLCPQVIT LDTLRMIQSRIDQNVARLHHSQADGGHGRFS
Sequences:
>Translated_431_residues MLEQVNVFYEGWGERWQWGTLVSTTALTGRPLIVFEYSNEARQTGLELSSYTLPLEGDRLRRDFPDHQLYLPGPVYDSLP DGWGMLLMDRLFRRRGLTTARIGPLERLAYIGSSAMGAMSFEPVAPEGQESDVHIPLEQLAADVKQVLHGNGGEFLQALL LVGGSPQGARPKALVYRDPETGGFTTAATPGFEAWLIKFPAKEEHAEVCAIEMVYAECLRMCGIETPDTQYLNLPDGLAA FASKRFDRRGGLRIPMQSLAAFTGANYQSPGVLDYVNFLRATQMCTNDVREMARAFERAVFNVAFNNRDDHPKNFAYIMS QDGQWRLSPAYDVTFCEGPSGYHQMDVMGEALEISRAQMLRLAEEAEMSPDAATGVIDGMCDVASRFTAIAENLCPQVIT LDTLRMIQSRIDQNVARLHHSQADGGHGRFS >Mature_431_residues MLEQVNVFYEGWGERWQWGTLVSTTALTGRPLIVFEYSNEARQTGLELSSYTLPLEGDRLRRDFPDHQLYLPGPVYDSLP DGWGMLLMDRLFRRRGLTTARIGPLERLAYIGSSAMGAMSFEPVAPEGQESDVHIPLEQLAADVKQVLHGNGGEFLQALL LVGGSPQGARPKALVYRDPETGGFTTAATPGFEAWLIKFPAKEEHAEVCAIEMVYAECLRMCGIETPDTQYLNLPDGLAA FASKRFDRRGGLRIPMQSLAAFTGANYQSPGVLDYVNFLRATQMCTNDVREMARAFERAVFNVAFNNRDDHPKNFAYIMS QDGQWRLSPAYDVTFCEGPSGYHQMDVMGEALEISRAQMLRLAEEAEMSPDAATGVIDGMCDVASRFTAIAENLCPQVIT LDTLRMIQSRIDQNVARLHHSQADGGHGRFS
Specific function: Unbalanced Or Excessive Expression Of Hipa Is Toxic To The Cell. [C]
COG id: COG3550
COG function: function code R; Uncharacterized protein related to capsule biosynthesis enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47880; Mature: 47880
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEQVNVFYEGWGERWQWGTLVSTTALTGRPLIVFEYSNEARQTGLELSSYTLPLEGDRL CCCCEEEHHHCCCCCCCCCCEEEEHEECCCCEEEEEECCHHHHCCCCHHHEECCCCCCHH RRDFPDHQLYLPGPVYDSLPDGWGMLLMDRLFRRRGLTTARIGPLERLAYIGSSAMGAMS HCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCHHHHHHHHCCCCCCCCC FEPVAPEGQESDVHIPLEQLAADVKQVLHGNGGEFLQALLLVGGSPQGARPKALVYRDPE CCCCCCCCCCCCEECCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCC TGGFTTAATPGFEAWLIKFPAKEEHAEVCAIEMVYAECLRMCGIETPDTQYLNLPDGLAA CCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHH FASKRFDRRGGLRIPMQSLAAFTGANYQSPGVLDYVNFLRATQMCTNDVREMARAFERAV HHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FNVAFNNRDDHPKNFAYIMSQDGQWRLSPAYDVTFCEGPSGYHQMDVMGEALEISRAQML HHEEECCCCCCCCCEEEEECCCCCEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH RLAEEAEMSPDAATGVIDGMCDVASRFTAIAENLCPQVITLDTLRMIQSRIDQNVARLHH HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH SQADGGHGRFS CCCCCCCCCCC >Mature Secondary Structure MLEQVNVFYEGWGERWQWGTLVSTTALTGRPLIVFEYSNEARQTGLELSSYTLPLEGDRL CCCCEEEHHHCCCCCCCCCCEEEEHEECCCCEEEEEECCHHHHCCCCHHHEECCCCCCHH RRDFPDHQLYLPGPVYDSLPDGWGMLLMDRLFRRRGLTTARIGPLERLAYIGSSAMGAMS HCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCHHHHHHHHCCCCCCCCC FEPVAPEGQESDVHIPLEQLAADVKQVLHGNGGEFLQALLLVGGSPQGARPKALVYRDPE CCCCCCCCCCCCEECCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCC TGGFTTAATPGFEAWLIKFPAKEEHAEVCAIEMVYAECLRMCGIETPDTQYLNLPDGLAA CCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHH FASKRFDRRGGLRIPMQSLAAFTGANYQSPGVLDYVNFLRATQMCTNDVREMARAFERAV HHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FNVAFNNRDDHPKNFAYIMSQDGQWRLSPAYDVTFCEGPSGYHQMDVMGEALEISRAQML HHEEECCCCCCCCCEEEEECCCCCEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH RLAEEAEMSPDAATGVIDGMCDVASRFTAIAENLCPQVITLDTLRMIQSRIDQNVARLHH HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH SQADGGHGRFS CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA