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The map label for this gene is yecS [H]

Identifier: 66046122

GI number: 66046122

Start: 3467984

End: 3468973

Strand: Reverse

Name: yecS [H]

Synonym: Psyr_2891

Alternate gene names: 66046122

Gene position: 3468973-3467984 (Counterclockwise)

Preceding gene: 66046123

Following gene: 66046121

Centisome position: 56.93

GC content: 61.31

Gene sequence:

>990_bases
ATGCCCATTGTCGCCAAACCCTATGACTTCATTGATGAGCCCAGTCATTATCCGCTTCCTCAGAGCCGCGTAGCACCGCC
GCCGATAAAGGCGTTGCAGGTCGTTCCCGCCCGGCATCCCGGTCGCTGGATCGGGTCGATATTCGCGGCGCTTGTGCTGC
TGGCCATTGTGCACTCGCTGGCGACCAACCCGCGCTGGGAGTGGGGCGTCTTCGGCCAGTGGTTCTTCTCGCCATCGGTG
CTGCGCGGCCTTGCGCAGACGCTTCTGTTGACGTTGCTCAGCACGCTGTTCAGCATCATTCTCGGCACGGCGCTGGCGTT
GGCGCGCCTGTCCGGCTCGCCGCTGCTGGCGGCACTGGCCTGGGGCTACATCTGGTTTTTCCGCTCGATGCCTGCGCTGT
TGGTGTTGATCATCCTCTACAACTTCGCCTACCTGTACGACCACATCGTACTCGGGGTGCCGTTCACCCAGCTGGTCTTC
GCCGAGTGGTCGACGGTGGACGTGCTCAGTCAGTTCACCGTTGCGGTACTGGGCTTGAGCCTGATGCAGTCGGCCTATAC
CGCAGAAATCATTCGTGGCGGGCTGATCGGTGTCGATGCCGGTCAGCATGAAGCTGCTGCGGCACTTGGCCTGCCTGCGT
CGCGGCGAATTTTCCGGATCATTCTGCCCCAGGCGTTGCGCTCGATTCTGCCTTCGGGTTTTAACGAGATCATCGGTCTG
GTCAAGGGAACATCCATTGTTTACGTGCTGGCCTTGCCGGAGCTGTTCTACACCGTGCAGGTCATCTACAACCGCACCCA
GGCAGTGATTCCGTTGCTGATCGTGGCCACCGTCTGGTACCTGATCATCACTACGGTGCTGACCAGTGCCCAGTATTACG
TCGAACGCCACTTTGCCCGTGGCTCGGCACGTGTACTGCCGCCGACACCCTTGCAGCGCCTGCGCGGCTGGCTCCATGCC
AGCGCTTCCGGGGAGAAGCACCATGAGTGA

Upstream 100 bases:

>100_bases
TTCGCCCTACGGTTTTACTGGCGGCTATTACTACACCCGGCTGACTTACGCCTTTTAAGGCCAGCACCTGACAACTCAAT
ATTGCGTGCGAGGAACCACC

Downstream 100 bases:

>100_bases
GGCCTCCACGCCAGTGCGCGCAGGGCGCATTCAGATTCAGGGCGTGGGCAAGCGCTTTGGCAGCCAGCAGGTGCTCAAGG
ACATCGACCTGAGCATCGAG

Product: amino acid ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MPIVAKPYDFIDEPSHYPLPQSRVAPPPIKALQVVPARHPGRWIGSIFAALVLLAIVHSLATNPRWEWGVFGQWFFSPSV
LRGLAQTLLLTLLSTLFSIILGTALALARLSGSPLLAALAWGYIWFFRSMPALLVLIILYNFAYLYDHIVLGVPFTQLVF
AEWSTVDVLSQFTVAVLGLSLMQSAYTAEIIRGGLIGVDAGQHEAAAALGLPASRRIFRIILPQALRSILPSGFNEIIGL
VKGTSIVYVLALPELFYTVQVIYNRTQAVIPLLIVATVWYLIITTVLTSAQYYVERHFARGSARVLPPTPLQRLRGWLHA
SASGEKHHE

Sequences:

>Translated_329_residues
MPIVAKPYDFIDEPSHYPLPQSRVAPPPIKALQVVPARHPGRWIGSIFAALVLLAIVHSLATNPRWEWGVFGQWFFSPSV
LRGLAQTLLLTLLSTLFSIILGTALALARLSGSPLLAALAWGYIWFFRSMPALLVLIILYNFAYLYDHIVLGVPFTQLVF
AEWSTVDVLSQFTVAVLGLSLMQSAYTAEIIRGGLIGVDAGQHEAAAALGLPASRRIFRIILPQALRSILPSGFNEIIGL
VKGTSIVYVLALPELFYTVQVIYNRTQAVIPLLIVATVWYLIITTVLTSAQYYVERHFARGSARVLPPTPLQRLRGWLHA
SASGEKHHE
>Mature_328_residues
PIVAKPYDFIDEPSHYPLPQSRVAPPPIKALQVVPARHPGRWIGSIFAALVLLAIVHSLATNPRWEWGVFGQWFFSPSVL
RGLAQTLLLTLLSTLFSIILGTALALARLSGSPLLAALAWGYIWFFRSMPALLVLIILYNFAYLYDHIVLGVPFTQLVFA
EWSTVDVLSQFTVAVLGLSLMQSAYTAEIIRGGLIGVDAGQHEAAAALGLPASRRIFRIILPQALRSILPSGFNEIIGLV
KGTSIVYVLALPELFYTVQVIYNRTQAVIPLLIVATVWYLIITTVLTSAQYYVERHFARGSARVLPPTPLQRLRGWLHAS
ASGEKHHE

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=223, Percent_Identity=35.4260089686099, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1786873, Length=223, Percent_Identity=33.6322869955157, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI87082239, Length=228, Percent_Identity=32.0175438596491, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1788645, Length=207, Percent_Identity=32.8502415458937, Blast_Score=86, Evalue=5e-18,
Organism=Escherichia coli, GI1787087, Length=181, Percent_Identity=33.1491712707182, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1787086, Length=227, Percent_Identity=28.1938325991189, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1788646, Length=230, Percent_Identity=27.8260869565217, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI48994930, Length=122, Percent_Identity=34.4262295081967, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1787030, Length=220, Percent_Identity=30, Blast_Score=68, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 36312; Mature: 36181

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIVAKPYDFIDEPSHYPLPQSRVAPPPIKALQVVPARHPGRWIGSIFAALVLLAIVHSL
CCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
ATNPRWEWGVFGQWFFSPSVLRGLAQTLLLTLLSTLFSIILGTALALARLSGSPLLAALA
HCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
WGYIWFFRSMPALLVLIILYNFAYLYDHIVLGVPFTQLVFAEWSTVDVLSQFTVAVLGLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHH
LMQSAYTAEIIRGGLIGVDAGQHEAAAALGLPASRRIFRIILPQALRSILPSGFNEIIGL
HHHHHHHHHHHHCCCEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH
VKGTSIVYVLALPELFYTVQVIYNRTQAVIPLLIVATVWYLIITTVLTSAQYYVERHFAR
HCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GSARVLPPTPLQRLRGWLHASASGEKHHE
CCCCCCCCCHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PIVAKPYDFIDEPSHYPLPQSRVAPPPIKALQVVPARHPGRWIGSIFAALVLLAIVHSL
CCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
ATNPRWEWGVFGQWFFSPSVLRGLAQTLLLTLLSTLFSIILGTALALARLSGSPLLAALA
HCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
WGYIWFFRSMPALLVLIILYNFAYLYDHIVLGVPFTQLVFAEWSTVDVLSQFTVAVLGLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHH
LMQSAYTAEIIRGGLIGVDAGQHEAAAALGLPASRRIFRIILPQALRSILPSGFNEIIGL
HHHHHHHHHHHHCCCEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH
VKGTSIVYVLALPELFYTVQVIYNRTQAVIPLLIVATVWYLIITTVLTSAQYYVERHFAR
HCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GSARVLPPTPLQRLRGWLHASASGEKHHE
CCCCCCCCCHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]