| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046087
Identifier: 66046087
GI number: 66046087
Start: 3425751
End: 3426734
Strand: Direct
Name: 66046087
Synonym: Psyr_2854
Alternate gene names: NA
Gene position: 3425751-3426734 (Clockwise)
Preceding gene: 66046086
Following gene: 66046088
Centisome position: 56.22
GC content: 46.65
Gene sequence:
>984_bases ATGAAAAAAGAATTCACATTTTCTGTCAAGTTCACTCGTTTTGATGAGAATTATTCACCCTCAGACACGACACGAGTCAC GACGAATTTTGCGAACCTGGCCAGGGGGGAAAGTCGCCAGGAGAATGTGCGTAATACGTTGACGATGATCGACAATCGCT TCAATGCGTTGGTGCACTGGGACAACCCCAAAGGAGATCGTTATACGGTGGATCTGAATATTGTCTCTGCAGAAATGCAT ATCGATACTGAAGGCAATCACCCTGCTATTCCATTAATTGAGATTTTAAAAACCACGATCATTGATCGAAAAACCGATGA GCGCATTAATGGAATGGCAGGAAATAATTTTTCCTCTTATGTGCGAGACTATGATTTCAGTGTGCGATTGCTGCAGCACA ATAAGAGTCAGTCCGGGCTCAGCACGCCAGAAAACTTCGGAGACTTGCACGGAAAACTCTACAAATGTTTCGTCAATTCA AGTAGCTACAAAGCCCATTTCGACAAGCCACCTGTTATCTGCCTGAGTGTATCGAGCGCCAGGACCTACCACCGGACCGG GAATCAGCATCCGGTATTAGGGTTCGAGTACCAGCAGGACGAATACTCGTTGACGGATGAGTACTTCAGGAAGATGGGAT TAAAGGTTCGCTATTTCATGCCCCCGAACAGCGTTGCGCCTTTGGCTTTCTATTTTTCAAACGACTTGCTTGGTGACTAC ACCCCTCTGGAGCTTATTAGCACCATCAGCACGATGGACACTTTTCAGAAAATTTATCGACCTGAGATCTATAACGCGAA CTCAACGGCAGGAAAACTCTACCAGCCCAGCTTGCAAAATCAAGATTACTCACTGACTCGCATTGTGTATGACCGCGAGG AACGCAGTCAGCTGGCTATCGAGCAAGGAAAGTTCGCTGAAGAGCACTTTATCAAACCTTACCAGACCGTTCTGGATCAG TGGTCCGCTAGCGACGCCCTTTGA
Upstream 100 bases:
>100_bases GAATAACGGCTGCTGATCGAAGACACAGACATCAGTCAACGCTAAAAGGGGCAAGACGCCTATCCGGGCGTTGCCTCGTA AGGAAGGATGCCAAGCCAAG
Downstream 100 bases:
>100_bases TCATCTAAACCAAGGCTATTTTTATGAAAAAGCTGTTGCCTACCTCTACCGCTGGCAGTTTGCCTAAACCTTCCTGGCTT GCACAACCTGAGACGCTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MKKEFTFSVKFTRFDENYSPSDTTRVTTNFANLARGESRQENVRNTLTMIDNRFNALVHWDNPKGDRYTVDLNIVSAEMH IDTEGNHPAIPLIEILKTTIIDRKTDERINGMAGNNFSSYVRDYDFSVRLLQHNKSQSGLSTPENFGDLHGKLYKCFVNS SSYKAHFDKPPVICLSVSSARTYHRTGNQHPVLGFEYQQDEYSLTDEYFRKMGLKVRYFMPPNSVAPLAFYFSNDLLGDY TPLELISTISTMDTFQKIYRPEIYNANSTAGKLYQPSLQNQDYSLTRIVYDREERSQLAIEQGKFAEEHFIKPYQTVLDQ WSASDAL
Sequences:
>Translated_327_residues MKKEFTFSVKFTRFDENYSPSDTTRVTTNFANLARGESRQENVRNTLTMIDNRFNALVHWDNPKGDRYTVDLNIVSAEMH IDTEGNHPAIPLIEILKTTIIDRKTDERINGMAGNNFSSYVRDYDFSVRLLQHNKSQSGLSTPENFGDLHGKLYKCFVNS SSYKAHFDKPPVICLSVSSARTYHRTGNQHPVLGFEYQQDEYSLTDEYFRKMGLKVRYFMPPNSVAPLAFYFSNDLLGDY TPLELISTISTMDTFQKIYRPEIYNANSTAGKLYQPSLQNQDYSLTRIVYDREERSQLAIEQGKFAEEHFIKPYQTVLDQ WSASDAL >Mature_327_residues MKKEFTFSVKFTRFDENYSPSDTTRVTTNFANLARGESRQENVRNTLTMIDNRFNALVHWDNPKGDRYTVDLNIVSAEMH IDTEGNHPAIPLIEILKTTIIDRKTDERINGMAGNNFSSYVRDYDFSVRLLQHNKSQSGLSTPENFGDLHGKLYKCFVNS SSYKAHFDKPPVICLSVSSARTYHRTGNQHPVLGFEYQQDEYSLTDEYFRKMGLKVRYFMPPNSVAPLAFYFSNDLLGDY TPLELISTISTMDTFQKIYRPEIYNANSTAGKLYQPSLQNQDYSLTRIVYDREERSQLAIEQGKFAEEHFIKPYQTVLDQ WSASDAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37792; Mature: 37792
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKEFTFSVKFTRFDENYSPSDTTRVTTNFANLARGESRQENVRNTLTMIDNRFNALVHW CCCEEEEEEEEEEECCCCCCCCCCEEEECHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEE DNPKGDRYTVDLNIVSAEMHIDTEGNHPAIPLIEILKTTIIDRKTDERINGMAGNNFSSY CCCCCCEEEEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCHHHH VRDYDFSVRLLQHNKSQSGLSTPENFGDLHGKLYKCFVNSSSYKAHFDKPPVICLSVSSA HHCCCCEEEEEECCCCCCCCCCCHHHHHHHHEEEEEEECCCCCEEECCCCCEEEEEECCC RTYHRTGNQHPVLGFEYQQDEYSLTDEYFRKMGLKVRYFMPPNSVAPLAFYFSNDLLGDY HHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHCCEEEEEECCCCCCCEEEEECCCCCCCC TPLELISTISTMDTFQKIYRPEIYNANSTAGKLYQPSLQNQDYSLTRIVYDREERSQLAI CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCEEEEEEECCCHHHHHHH EQGKFAEEHFIKPYQTVLDQWSASDAL HCCCCCHHHCCCHHHHHHHHCCCCCCC >Mature Secondary Structure MKKEFTFSVKFTRFDENYSPSDTTRVTTNFANLARGESRQENVRNTLTMIDNRFNALVHW CCCEEEEEEEEEEECCCCCCCCCCEEEECHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEE DNPKGDRYTVDLNIVSAEMHIDTEGNHPAIPLIEILKTTIIDRKTDERINGMAGNNFSSY CCCCCCEEEEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCHHHH VRDYDFSVRLLQHNKSQSGLSTPENFGDLHGKLYKCFVNSSSYKAHFDKPPVICLSVSSA HHCCCCEEEEEECCCCCCCCCCCHHHHHHHHEEEEEEECCCCCEEECCCCCEEEEEECCC RTYHRTGNQHPVLGFEYQQDEYSLTDEYFRKMGLKVRYFMPPNSVAPLAFYFSNDLLGDY HHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHCCEEEEEECCCCCCCEEEEECCCCCCCC TPLELISTISTMDTFQKIYRPEIYNANSTAGKLYQPSLQNQDYSLTRIVYDREERSQLAI CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCEEEEEEECCCHHHHHHH EQGKFAEEHFIKPYQTVLDQWSASDAL HCCCCCHHHCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA