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The map label for this gene is ndpA [C]

Identifier: 66046086

GI number: 66046086

Start: 3424261

End: 3424794

Strand: Direct

Name: ndpA [C]

Synonym: Psyr_2852

Alternate gene names: 66046086

Gene position: 3424261-3424794 (Clockwise)

Preceding gene: 66046085

Following gene: 66046087

Centisome position: 56.19

GC content: 57.68

Gene sequence:

>534_bases
ATGCCTGTACGTCATAGCGTCATCCACAAAATCGACAAGAAGCCTGACGGCAGCCCGGCCGTTCTGTTCCTGGGCGCTGC
CGGGCAGTTCGAGAGCCAGGCCCGCGATGACCTGATGAGTCAGCTCAACGAAAGCTACAACGCAACCGCCAGCAAGGGAT
GGGGGTTCTTCCAACCACAGTCAGGCGCTTTCCCGTTTAGCGGCTGGCTCGGCGAGTACATGACCGGCGATATCGACTTA
CTGAAATTCAGCGCCAGCGCCGTTGAGCACTTTACCAAGCTGATGGAAGAGTCGAACCTAACCACCGGCGGGCACGTCCT
TTTCTGCCACTACCAGAAAGGCTTGACCGACTACCTGGTTATCGCTCTGGTGCAGGAAACCGAAGCGGTGACCATGACCG
AAGAGCTGGCAATGATTGCGGTGAACTGCCTCAACCTCGACCACATCCGCCTGGCTGCGCGCATCAACGTGAGCGAGTGG
CAGAGCAACCCTCAGTCGAAGCAGTGCATCTCGTACCTCAAGACGAATTGCTGA

Upstream 100 bases:

>100_bases
TCCTAGTGCCCGGCTCCATGCCGGTCACCCGTAATACCCCATTCCTAACCAACTTGCCACCACCGGACACGGAGGGCTGC
GCCTACCCGAGGTAAACGAA

Downstream 100 bases:

>100_bases
AAAACCTGTTCGGCGATGACTGGAATTACCCGGTCGGCGAGCGCGCCGTGGAGTCTAACCACGAATACGATTATCTGCTG
TGCGTCATCGAAGACGTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MPVRHSVIHKIDKKPDGSPAVLFLGAAGQFESQARDDLMSQLNESYNATASKGWGFFQPQSGAFPFSGWLGEYMTGDIDL
LKFSASAVEHFTKLMEESNLTTGGHVLFCHYQKGLTDYLVIALVQETEAVTMTEELAMIAVNCLNLDHIRLAARINVSEW
QSNPQSKQCISYLKTNC

Sequences:

>Translated_177_residues
MPVRHSVIHKIDKKPDGSPAVLFLGAAGQFESQARDDLMSQLNESYNATASKGWGFFQPQSGAFPFSGWLGEYMTGDIDL
LKFSASAVEHFTKLMEESNLTTGGHVLFCHYQKGLTDYLVIALVQETEAVTMTEELAMIAVNCLNLDHIRLAARINVSEW
QSNPQSKQCISYLKTNC
>Mature_176_residues
PVRHSVIHKIDKKPDGSPAVLFLGAAGQFESQARDDLMSQLNESYNATASKGWGFFQPQSGAFPFSGWLGEYMTGDIDLL
KFSASAVEHFTKLMEESNLTTGGHVLFCHYQKGLTDYLVIALVQETEAVTMTEELAMIAVNCLNLDHIRLAARINVSEWQ
SNPQSKQCISYLKTNC

Specific function: Unknown

COG id: COG3081

COG function: function code R; Nucleoid-associated protein

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YejK family [H]

Homologues:

Organism=Escherichia coli, GI1788513, Length=138, Percent_Identity=28.2608695652174, Blast_Score=77, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007358 [H]

Pfam domain/function: PF04245 NA37 [H]

EC number: NA

Molecular weight: Translated: 19637; Mature: 19506

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVRHSVIHKIDKKPDGSPAVLFLGAAGQFESQARDDLMSQLNESYNATASKGWGFFQPQ
CCCHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
SGAFPFSGWLGEYMTGDIDLLKFSASAVEHFTKLMEESNLTTGGHVLFCHYQKGLTDYLV
CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHH
IALVQETEAVTMTEELAMIAVNCLNLDHIRLAARINVSEWQSNPQSKQCISYLKTNC
HHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
PVRHSVIHKIDKKPDGSPAVLFLGAAGQFESQARDDLMSQLNESYNATASKGWGFFQPQ
CCHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
SGAFPFSGWLGEYMTGDIDLLKFSASAVEHFTKLMEESNLTTGGHVLFCHYQKGLTDYLV
CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHH
IALVQETEAVTMTEELAMIAVNCLNLDHIRLAARINVSEWQSNPQSKQCISYLKTNC
HHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA