| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046085
Identifier: 66046085
GI number: 66046085
Start: 3423609
End: 3423962
Strand: Direct
Name: 66046085
Synonym: Psyr_2851
Alternate gene names: NA
Gene position: 3423609-3423962 (Clockwise)
Preceding gene: 66046084
Following gene: 66046086
Centisome position: 56.18
GC content: 56.78
Gene sequence:
>354_bases ATGGCGATGGATCAAAAAGAGCGATCAGCCAAGACGGCGCTGAAGCGGAAACTGGTCGCCGAGAAAGAGCTGCGCCACCG GGTTAGGCCTGGCATTGAGCAGGCCCTGAATCGGGTTCGCCAGCGCGGCAAGATGCCCATCGTCAGCGAGGTCTTGCAGA TAGCGATCATGAAGATGGATTTGATGGATGATGAAGAGCTTGATGCCTTTCTGACTTATCCGCGCCACGAAATCGTAGTT AGCGAATCCGTGGCGCGGGCAATCTACGACGCGGGCGTCAGGAACATCCTGAGCGCCGACCAAGACGAATCAGACGAGGT CATCTCACCGCTCGCCATCAATTGCTGCGACTGA
Upstream 100 bases:
>100_bases CAGCAGCCGGGCGAAATGAAGCGCCTGCAAATGCGCGTCCGCCACGGCAGAAGCCAGCATCACATTCACTTGCCGCCCAG CGGCTTACAGGAGCGGTTTA
Downstream 100 bases:
>100_bases GCTGAACGTTCTGGCTGATGCAATTGATGTTAGTCACCGTGCCCATGAAAGCATTCATCTGCACAGAGCACTTTTCAATA TTCAGGCCGTTTCTGCCATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MAMDQKERSAKTALKRKLVAEKELRHRVRPGIEQALNRVRQRGKMPIVSEVLQIAIMKMDLMDDEELDAFLTYPRHEIVV SESVARAIYDAGVRNILSADQDESDEVISPLAINCCD
Sequences:
>Translated_117_residues MAMDQKERSAKTALKRKLVAEKELRHRVRPGIEQALNRVRQRGKMPIVSEVLQIAIMKMDLMDDEELDAFLTYPRHEIVV SESVARAIYDAGVRNILSADQDESDEVISPLAINCCD >Mature_116_residues AMDQKERSAKTALKRKLVAEKELRHRVRPGIEQALNRVRQRGKMPIVSEVLQIAIMKMDLMDDEELDAFLTYPRHEIVVS ESVARAIYDAGVRNILSADQDESDEVISPLAINCCD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13295; Mature: 13163
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMDQKERSAKTALKRKLVAEKELRHRVRPGIEQALNRVRQRGKMPIVSEVLQIAIMKMD CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHH LMDDEELDAFLTYPRHEIVVSESVARAIYDAGVRNILSADQDESDEVISPLAINCCD CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHCCCC >Mature Secondary Structure AMDQKERSAKTALKRKLVAEKELRHRVRPGIEQALNRVRQRGKMPIVSEVLQIAIMKMD CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHH LMDDEELDAFLTYPRHEIVVSESVARAIYDAGVRNILSADQDESDEVISPLAINCCD CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA