| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046041
Identifier: 66046041
GI number: 66046041
Start: 3383546
End: 3384127
Strand: Reverse
Name: 66046041
Synonym: Psyr_2805
Alternate gene names: NA
Gene position: 3384127-3383546 (Counterclockwise)
Preceding gene: 66046042
Following gene: 66046039
Centisome position: 55.53
GC content: 57.9
Gene sequence:
>582_bases ATGAAAATCCACTCGGCACGTCAGGCGTGGCATGACTGCACCTACATTCCAGCACCTGGCCAGTCCTCTGACGTCGTTCA GCTCGGCGTGGTGGTGCAGGGCACGGAGCGAGGGCCAACAGCAAACCACGCGATGCATAGCGCCTTGGCCGGGCACATCC AATCGGCGATCGCCAAACTTCACCCGCAAGTACGGGTGTTCGGCGAGTACATGTATTCAGCTAACCGTGACGACGACATC AACGAAGCGGCAGAAGGCGTTGTGTTTGGCATGGTTATGTCGAAGTCGAAGCGCATGACGGCCGGCAAGAGGGAGAAGCT GGAGTACGTGGTGAAGGGCGTAATGCGCCGGTATCGCTACATGCATCAGGGCGGGCAGTCGGCTAATGACGATCCTCTGA TCAAGCCAGAGGCTTTCCGTTCGTGGCTGATGGGCGAGTTCGGCGTGAGGCTGGAATCGTGCAACTGGGACCGGGATTGG GAGTGCTTCGTGCGTCTTTCATTCGATTGCTGCGAGGACCTGGATCGCATGGCTTTGAGCCCAATTGGAGCGGTGATTTA CGAGATTAGAGAAGCGGCTTGA
Upstream 100 bases:
>100_bases AAGGCCCTCATGAGCCTCAGAAGTACACCATCGAAGAATTGAAAGCCCTGACAGGCAAGTACCGGGCACTGACAAAAGAA TTGAAAAAGGGGCAAGCAGC
Downstream 100 bases:
>100_bases CTTCCCGTGCGGCTGAGGGCATTATTTTGCCATATTGAGTATTTTGCCTACGGCAACTCGCTCAGGAAGCACTGAAAGCC CGACCTTGTTGTCGGGCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MKIHSARQAWHDCTYIPAPGQSSDVVQLGVVVQGTERGPTANHAMHSALAGHIQSAIAKLHPQVRVFGEYMYSANRDDDI NEAAEGVVFGMVMSKSKRMTAGKREKLEYVVKGVMRRYRYMHQGGQSANDDPLIKPEAFRSWLMGEFGVRLESCNWDRDW ECFVRLSFDCCEDLDRMALSPIGAVIYEIREAA
Sequences:
>Translated_193_residues MKIHSARQAWHDCTYIPAPGQSSDVVQLGVVVQGTERGPTANHAMHSALAGHIQSAIAKLHPQVRVFGEYMYSANRDDDI NEAAEGVVFGMVMSKSKRMTAGKREKLEYVVKGVMRRYRYMHQGGQSANDDPLIKPEAFRSWLMGEFGVRLESCNWDRDW ECFVRLSFDCCEDLDRMALSPIGAVIYEIREAA >Mature_193_residues MKIHSARQAWHDCTYIPAPGQSSDVVQLGVVVQGTERGPTANHAMHSALAGHIQSAIAKLHPQVRVFGEYMYSANRDDDI NEAAEGVVFGMVMSKSKRMTAGKREKLEYVVKGVMRRYRYMHQGGQSANDDPLIKPEAFRSWLMGEFGVRLESCNWDRDW ECFVRLSFDCCEDLDRMALSPIGAVIYEIREAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21758; Mature: 21758
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIHSARQAWHDCTYIPAPGQSSDVVQLGVVVQGTERGPTANHAMHSALAGHIQSAIAKL CCCCHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH HPQVRVFGEYMYSANRDDDINEAAEGVVFGMVMSKSKRMTAGKREKLEYVVKGVMRRYRY CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHH MHQGGQSANDDPLIKPEAFRSWLMGEFGVRLESCNWDRDWECFVRLSFDCCEDLDRMALS HHCCCCCCCCCCCCCHHHHHHHHHHHHCCEEECCCCCCCCEEEEEECHHHHHHHHHHHHH PIGAVIYEIREAA HHHHHHHHHHHCC >Mature Secondary Structure MKIHSARQAWHDCTYIPAPGQSSDVVQLGVVVQGTERGPTANHAMHSALAGHIQSAIAKL CCCCHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH HPQVRVFGEYMYSANRDDDINEAAEGVVFGMVMSKSKRMTAGKREKLEYVVKGVMRRYRY CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHH MHQGGQSANDDPLIKPEAFRSWLMGEFGVRLESCNWDRDWECFVRLSFDCCEDLDRMALS HHCCCCCCCCCCCCCHHHHHHHHHHHHCCEEECCCCCCCCEEEEEECHHHHHHHHHHHHH PIGAVIYEIREAA HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA