| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046015
Identifier: 66046015
GI number: 66046015
Start: 3364651
End: 3364989
Strand: Reverse
Name: 66046015
Synonym: Psyr_2779
Alternate gene names: NA
Gene position: 3364989-3364651 (Counterclockwise)
Preceding gene: 66046016
Following gene: 66046014
Centisome position: 55.22
GC content: 56.93
Gene sequence:
>339_bases ATGGCGATTGAAACCTTTACCTGGCCTACCCAGCACGGAGACGCGCCCGATATCGCTTATCGGGTGCGCACCTCCCAGTT CGGCAATGGCTACAAGCAGGACGTCGGAGACGGGCCGAATAACAAGGAGGACTCATACCCGATCACATTCACCGGAACGA AGGATAGGATTCTGAAGATTATGGAGTTCCTCGACAAGCACGCCGGAGCGAAAGCGTTCCTCTGGACCACACCGCTCGGC CAGCTGGGTCTGTTCACCTGCAAAAATCCAGTGCCGACCCCGATGGGTGGCAACGTATTCAAATTGACGGCCACGTTCGA CCGGGCCTTCCACCCTTAA
Upstream 100 bases:
>100_bases AGGGCATTCAGCAGGCGGCAAAAACCGAGGCCGAGACTGCAATCGCTCGCGCGCTGCAACCTGGTGGTTCGATCTGGAGG CTCACAAATGGCAGGTAATT
Downstream 100 bases:
>100_bases GGACATCTCATGCCGTTGATTGCTGACATCCAGGCGCTTGAGCCAGGCAGCGAAGCATTGCTGTTTGAGCTCGATGGCTC TGATTACGGCGCAGACATTT
Product: Phage minor tail
Products: NA
Alternate protein names: Minor Tail Family Protein; Prophage LambdaSo Minor Tail Protein M; Prophage LambdaSo Protein; Phage Minor Tail; Phage Minor Tail Family Protein; Phage-Related Protein; LambdaSo Minor Tail Protein M
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MAIETFTWPTQHGDAPDIAYRVRTSQFGNGYKQDVGDGPNNKEDSYPITFTGTKDRILKIMEFLDKHAGAKAFLWTTPLG QLGLFTCKNPVPTPMGGNVFKLTATFDRAFHP
Sequences:
>Translated_112_residues MAIETFTWPTQHGDAPDIAYRVRTSQFGNGYKQDVGDGPNNKEDSYPITFTGTKDRILKIMEFLDKHAGAKAFLWTTPLG QLGLFTCKNPVPTPMGGNVFKLTATFDRAFHP >Mature_111_residues AIETFTWPTQHGDAPDIAYRVRTSQFGNGYKQDVGDGPNNKEDSYPITFTGTKDRILKIMEFLDKHAGAKAFLWTTPLGQ LGLFTCKNPVPTPMGGNVFKLTATFDRAFHP
Specific function: Unknown
COG id: COG4718
COG function: function code S; Phage-related protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12467; Mature: 12336
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIETFTWPTQHGDAPDIAYRVRTSQFGNGYKQDVGDGPNNKEDSYPITFTGTKDRILKI CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHCCCCCCCCCCCCCEEEECCHHHHHHH MEFLDKHAGAKAFLWTTPLGQLGLFTCKNPVPTPMGGNVFKLTATFDRAFHP HHHHHHCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCCC >Mature Secondary Structure AIETFTWPTQHGDAPDIAYRVRTSQFGNGYKQDVGDGPNNKEDSYPITFTGTKDRILKI CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHCCCCCCCCCCCCCEEEECCHHHHHHH MEFLDKHAGAKAFLWTTPLGQLGLFTCKNPVPTPMGGNVFKLTATFDRAFHP HHHHHHCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA