Click here to switch to the map view.

The map label for this gene is atoS [C]

Identifier: 66045936

GI number: 66045936

Start: 3279755

End: 3281359

Strand: Reverse

Name: atoS [C]

Synonym: Psyr_2700

Alternate gene names: 66045936

Gene position: 3281359-3279755 (Counterclockwise)

Preceding gene: 66045937

Following gene: 66045935

Centisome position: 53.85

GC content: 56.01

Gene sequence:

>1605_bases
GTGTCGGAAAATAAAACCCGGGTCGACAATGCGGCGACGGGAGATATCAAGCATCAGGGGAAAGATATCTTTTTCGCGGC
GGTAGAAACGACACGGATGCCGATGATCGTGACGGACCCCAATCGCCCGGACAATCCCATCATCTTTGCCAACCGGGCAT
TTCTGGAAATGACCGGCTATGCGTCAGAGGAAATCATCGGTAGCAACTGCCGATTTCTTCAAGGGCCGGACACTGATCGG
ACGGCGGTGCAGTCGATTCGCGATGCAATTGACCAGCGCGTCGATATCTCCACTGAAATTCTCAACTACCGTAAAGACGG
CTCCTCGTTCTGGAATGCCCTGTTTATTTCTCCGGTCTATAACGACGCAGGCGAGCTTATTTATTTTTTTGCATCGCAAC
TGGACATCAGTCGCCGTCGAGATGCCGAAGAAGCATTGCGTCAGGCACAGAAGATGGAAGCGCTGGGGCAGCTTACCGGT
GGCATCGCGCACGACTTCAATAACCTGCTGCAAGTGATGGGCGGTTATATTGATCTGATCGGCAGTGCGGCAGAGAAACC
CGTCATTGATGTGCAGCGTGTCCAGCGCAGTGTTCATCACGCCAAGTCTGCCGTCGAACGCGCCAGTACGTTGACCAAGC
AATTGCTGGCGTTTGCCCGTAAACAGAAACTGCAGGGGCGAGTCCTCAATCTTAATGGTCTGGTCTCCACGACAGAACCG
CTGATCGAGCGTACTTTTGGCCCGGAAGTGATTATCGAAACCGATCTGGATCCGGCGCTGAAGAACTGCCGTATTGATCC
GACCCAGGCAGAAGTTGCCTTGCTGAACATTTTCATCAACGCCCGGGACGCGCTGATTGGCAGGCTCAACCCCAAGATAT
TCATCGAAACCCGTAACCTGGTCGTCGATGAGCTGGCCAATATGTCCTATGACGGCCTGTTACCTGGCCGTTATGTCTCT
ATTGCGGTCACGGACAATGGCATTGGCATGCCTGCGAGTATCCGTGATCGGGTAATGGACCCGTTTTTTACCACCAAGGA
AGAAGGCAAGGGCTCCGGGCTCGGCCTGTCGATGGTCTATGGCTTTGCCAAGCAGTCGGGTGGTGCGGCGCGTATTTATA
CCGAAGAAGGTGTCGGCACCACGCTGCGCCTGTATTTCCCGGTAGACGAAGCCGTCCTGAGCAAGAACGATCCGCCGAAA
GCTTCGGAACGGCGTATTGGCAGTTCCGAGCGGATCCTGATCGTGGAAGATCGTCCTGATGTGGCCGAACTGGCGAAGAT
GGTGCTGGATGATTACGGCTATGTGTCGGAAATTGTCCTCAATGCCCGGGAGGCACTGAAGCGCTTCGAGGCCGGCGCCA
CGTATGACTTGCTGTTCACTGACCTGATCATGCCGGGCGGGATGAACGGTGTGATGCTCGCGCGGGAAGTCAGGCGCCGG
TTTCCGAAGGTCAAGGTGCTGTTGACCACCGGCTACGCTGAGAGCTCGATCGAGCGAACCGACATTGGCGGCTCCGAGTT
TGAGGTGGTGTCCAAGCCCTGCATGCCGCAGGACCTCGCCAGGAAGGTCAGGCAGGTCCTCGACGGGCCGAACGGTATCG
CCTGA

Upstream 100 bases:

>100_bases
GATTTTTGTCAGATACCTGAGAACCCTTTTGAGGCTGCGCCAGTCCTAGCCATGAGAGAGCAGGCGCAATAGCCCAATAA
ACAGTCTTGGAGTTTCTGGA

Downstream 100 bases:

>100_bases
CGATACTGACAATGAACACATGAAGGCCTGCCTGTTCTCAGTCGGGCCTTCATGCTGTTTGGCGCGGTCTTTATTACGAT
ACCTGCGCAAACACTTGTGA

Product: histidine kinase

Products: NA

Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]

Number of amino acids: Translated: 534; Mature: 533

Protein sequence:

>534_residues
MSENKTRVDNAATGDIKHQGKDIFFAAVETTRMPMIVTDPNRPDNPIIFANRAFLEMTGYASEEIIGSNCRFLQGPDTDR
TAVQSIRDAIDQRVDISTEILNYRKDGSSFWNALFISPVYNDAGELIYFFASQLDISRRRDAEEALRQAQKMEALGQLTG
GIAHDFNNLLQVMGGYIDLIGSAAEKPVIDVQRVQRSVHHAKSAVERASTLTKQLLAFARKQKLQGRVLNLNGLVSTTEP
LIERTFGPEVIIETDLDPALKNCRIDPTQAEVALLNIFINARDALIGRLNPKIFIETRNLVVDELANMSYDGLLPGRYVS
IAVTDNGIGMPASIRDRVMDPFFTTKEEGKGSGLGLSMVYGFAKQSGGAARIYTEEGVGTTLRLYFPVDEAVLSKNDPPK
ASERRIGSSERILIVEDRPDVAELAKMVLDDYGYVSEIVLNAREALKRFEAGATYDLLFTDLIMPGGMNGVMLAREVRRR
FPKVKVLLTTGYAESSIERTDIGGSEFEVVSKPCMPQDLARKVRQVLDGPNGIA

Sequences:

>Translated_534_residues
MSENKTRVDNAATGDIKHQGKDIFFAAVETTRMPMIVTDPNRPDNPIIFANRAFLEMTGYASEEIIGSNCRFLQGPDTDR
TAVQSIRDAIDQRVDISTEILNYRKDGSSFWNALFISPVYNDAGELIYFFASQLDISRRRDAEEALRQAQKMEALGQLTG
GIAHDFNNLLQVMGGYIDLIGSAAEKPVIDVQRVQRSVHHAKSAVERASTLTKQLLAFARKQKLQGRVLNLNGLVSTTEP
LIERTFGPEVIIETDLDPALKNCRIDPTQAEVALLNIFINARDALIGRLNPKIFIETRNLVVDELANMSYDGLLPGRYVS
IAVTDNGIGMPASIRDRVMDPFFTTKEEGKGSGLGLSMVYGFAKQSGGAARIYTEEGVGTTLRLYFPVDEAVLSKNDPPK
ASERRIGSSERILIVEDRPDVAELAKMVLDDYGYVSEIVLNAREALKRFEAGATYDLLFTDLIMPGGMNGVMLAREVRRR
FPKVKVLLTTGYAESSIERTDIGGSEFEVVSKPCMPQDLARKVRQVLDGPNGIA
>Mature_533_residues
SENKTRVDNAATGDIKHQGKDIFFAAVETTRMPMIVTDPNRPDNPIIFANRAFLEMTGYASEEIIGSNCRFLQGPDTDRT
AVQSIRDAIDQRVDISTEILNYRKDGSSFWNALFISPVYNDAGELIYFFASQLDISRRRDAEEALRQAQKMEALGQLTGG
IAHDFNNLLQVMGGYIDLIGSAAEKPVIDVQRVQRSVHHAKSAVERASTLTKQLLAFARKQKLQGRVLNLNGLVSTTEPL
IERTFGPEVIIETDLDPALKNCRIDPTQAEVALLNIFINARDALIGRLNPKIFIETRNLVVDELANMSYDGLLPGRYVSI
AVTDNGIGMPASIRDRVMDPFFTTKEEGKGSGLGLSMVYGFAKQSGGAARIYTEEGVGTTLRLYFPVDEAVLSKNDPPKA
SERRIGSSERILIVEDRPDVAELAKMVLDDYGYVSEIVLNAREALKRFEAGATYDLLFTDLIMPGGMNGVMLAREVRRRF
PKVKVLLTTGYAESSIERTDIGGSEFEVVSKPCMPQDLARKVRQVLDGPNGIA

Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Homo sapiens, GI6912446, Length=95, Percent_Identity=38.9473684210526, Blast_Score=83, Evalue=7e-16,
Organism=Homo sapiens, GI38569493, Length=98, Percent_Identity=35.7142857142857, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI27886667, Length=94, Percent_Identity=32.9787234042553, Blast_Score=73, Evalue=8e-13,
Organism=Escherichia coli, GI1788549, Length=336, Percent_Identity=27.0833333333333, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1790436, Length=274, Percent_Identity=27.7372262773723, Blast_Score=99, Evalue=7e-22,
Organism=Escherichia coli, GI48994928, Length=229, Percent_Identity=27.9475982532751, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1790300, Length=253, Percent_Identity=28.4584980237154, Blast_Score=68, Evalue=1e-12,
Organism=Drosophila melanogaster, GI17136946, Length=101, Percent_Identity=32.6732673267327, Blast_Score=81, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR011006
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082
- InterPro:   IPR001789 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 59023; Mature: 58892

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSENKTRVDNAATGDIKHQGKDIFFAAVETTRMPMIVTDPNRPDNPIIFANRAFLEMTGY
CCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEECCCCCCCCEEEECCEEEEECCC
ASEEIIGSNCRFLQGPDTDRTAVQSIRDAIDQRVDISTEILNYRKDGSSFWNALFISPVY
CCHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHEEEEEHHH
NDAGELIYFFASQLDISRRRDAEEALRQAQKMEALGQLTGGIAHDFNNLLQVMGGYIDLI
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
GSAAEKPVIDVQRVQRSVHHAKSAVERASTLTKQLLAFARKQKLQGRVLNLNGLVSTTEP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHH
LIERTFGPEVIIETDLDPALKNCRIDPTQAEVALLNIFINARDALIGRLNPKIFIETRNL
HHHHCCCCCEEEECCCCHHHHCCCCCCCHHHEEEEHEEHHHHHHHHCCCCCEEEEEEHHH
VVDELANMSYDGLLPGRYVSIAVTDNGIGMPASIRDRVMDPFFTTKEEGKGSGLGLSMVY
HHHHHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
GFAKQSGGAARIYTEEGVGTTLRLYFPVDEAVLSKNDPPKASERRIGSSERILIVEDRPD
HHHHCCCCEEEEEEECCCCEEEEEEECCCHHHHCCCCCCCHHHHCCCCCCCEEEEECCCC
VAELAKMVLDDYGYVSEIVLNAREALKRFEAGATYDLLFTDLIMPGGMNGVMLAREVRRR
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH
FPKVKVLLTTGYAESSIERTDIGGSEFEVVSKPCMPQDLARKVRQVLDGPNGIA
CCCEEEEEEECCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SENKTRVDNAATGDIKHQGKDIFFAAVETTRMPMIVTDPNRPDNPIIFANRAFLEMTGY
CCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEECCCCCCCCEEEECCEEEEECCC
ASEEIIGSNCRFLQGPDTDRTAVQSIRDAIDQRVDISTEILNYRKDGSSFWNALFISPVY
CCHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHEEEEEHHH
NDAGELIYFFASQLDISRRRDAEEALRQAQKMEALGQLTGGIAHDFNNLLQVMGGYIDLI
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
GSAAEKPVIDVQRVQRSVHHAKSAVERASTLTKQLLAFARKQKLQGRVLNLNGLVSTTEP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHH
LIERTFGPEVIIETDLDPALKNCRIDPTQAEVALLNIFINARDALIGRLNPKIFIETRNL
HHHHCCCCCEEEECCCCHHHHCCCCCCCHHHEEEEHEEHHHHHHHHCCCCCEEEEEEHHH
VVDELANMSYDGLLPGRYVSIAVTDNGIGMPASIRDRVMDPFFTTKEEGKGSGLGLSMVY
HHHHHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
GFAKQSGGAARIYTEEGVGTTLRLYFPVDEAVLSKNDPPKASERRIGSSERILIVEDRPD
HHHHCCCCEEEEEEECCCCEEEEEEECCCHHHHCCCCCCCHHHHCCCCCCCEEEEECCCC
VAELAKMVLDDYGYVSEIVLNAREALKRFEAGATYDLLFTDLIMPGGMNGVMLAREVRRR
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH
FPKVKVLLTTGYAESSIERTDIGGSEFEVVSKPCMPQDLARKVRQVLDGPNGIA
CCCEEEEEEECCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA