| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045909
Identifier: 66045909
GI number: 66045909
Start: 3244607
End: 3245971
Strand: Direct
Name: 66045909
Synonym: Psyr_2673
Alternate gene names: NA
Gene position: 3244607-3245971 (Clockwise)
Preceding gene: 66045908
Following gene: 66045910
Centisome position: 53.25
GC content: 61.68
Gene sequence:
>1365_bases ATGAAAACAATACGGATTGGTTCAGGGGCCGGTTATTCCGGCGACCGCATCGAGCCGGCGATCGAGCTGGCCGAGCATGG AGAACTGGATTACCTGGTATTTGAATGCCTCGCGGAACGTACCATTGCGCTGGCACAGCAGTCGCGTCTGGTGGACCCAT CAGCAGGCTACGATCCATTGCTGAGCGAGCGCATGCGCCGGGTCTTGCCTTTTGTGGGCAAAGGTACTGATGGCACGCGC CGCCGCTTGCGAATCATCACCAACATGGGAGCCGCAAATCCGCTTGGCGCCGCAAGCGAAATACGCCGGATAGCGGCAGA GCTTGGCCTGAGCGGCTTGAAAGTCGCAGCGCTGACAGGCGATGACGTGCTCGCAGCCCTGCTGCAACAGCCCGATCAAA CCCTCGACAATGGCCGGTCACTGCGATCCCTCGGTGACAGACTCATTTCGGCCAATGCCTACCTGGGTGTGGAAGGCATC ATCCAGGCCTTGCGCGCCGATGCTGACGTGATCGTTACCGGAAGGGTCGCTGATCCTTCACTGTTTCTCGCAGCGCAAAT GTTCGAGTTCGGCTGGGCCGAGGACGACTGGGCTTTGCTGGGCCGCGGAACCCTGGTCGGGCATTTGCTCGAATGCGCCG GCCAGGTCAGCGGCGGCTATTTCGCGGATCCCGGTTTTAAAGACGTCCCGGACCTGGACCGCCTGGGCTTCCCGCTGGCC GAGATAGATGCGGCAGGCAATGCGCTCATCAGCAAAGTGGCAGGCTCCGGTGGCCGTATTGATACCGCCACCTGCACCGA GCAGATGCTGTACGAAGTGCATGACCCTGCCGCCTACCTGACGCCCGATGTCAGCGCGGACTTCACCCATGCTGCCTTCG AATCCATCGCAAGAAACGAAGTGCGCGTTCAGGGGGCGGACGGACACGCACGCCCCGAGACGCTGAAGGTGTCAGTGGGT TTTCTCGATGGCTGGATCGGCGAAGGACAAATGTCCTACGGCGGCCCCGGCGCACTGGCCCGCGGGCTGTTGGCGAAGGA CATCGTGCTCAAACGTCTGGCCCTGACCGGCGTGGCATGTGAGGACATTCGAGCCGAACTGATCGGCGTTAACGCCTTGC ATGGAAGTCACCTGGGAGCGCGCGCCGAGGGCGAGCCCTGGGAGGTACGCCTCCGGGTGGCCGCGCGTTGCGTGGACAAA AACGATGCGGTACGCGTCGGCAATGAAGTGGAAACCCTCTATACCAACGGCCCGTATGGAGGCGGCGGTGCGAGCAAATC AGTCCGCCAGGTAGTAGCCGTGGCGTCACTGTTCCTGCCAAGGGACGCAGTCAAACTGCAGGTGCATATAGAGGACATGA CATGA
Upstream 100 bases:
>100_bases CAAGATCGAGCTGGCCGATCACCAGCGCTTCACTATCCCTTTCCTGTTTGCGGCCTCGGTCATCATGACCCTGACCGCTA TGGTCATAGGAGTTTTCTGA
Downstream 100 bases:
>100_bases ACACCACCCAACTGCGGGACATCGCTCACACACGTACCGGTGACAAGGGTGACGTGTCCAATATCTCCGTCGTTGCCTTT CACATCGACGATTATCCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 454; Mature: 454
Protein sequence:
>454_residues MKTIRIGSGAGYSGDRIEPAIELAEHGELDYLVFECLAERTIALAQQSRLVDPSAGYDPLLSERMRRVLPFVGKGTDGTR RRLRIITNMGAANPLGAASEIRRIAAELGLSGLKVAALTGDDVLAALLQQPDQTLDNGRSLRSLGDRLISANAYLGVEGI IQALRADADVIVTGRVADPSLFLAAQMFEFGWAEDDWALLGRGTLVGHLLECAGQVSGGYFADPGFKDVPDLDRLGFPLA EIDAAGNALISKVAGSGGRIDTATCTEQMLYEVHDPAAYLTPDVSADFTHAAFESIARNEVRVQGADGHARPETLKVSVG FLDGWIGEGQMSYGGPGALARGLLAKDIVLKRLALTGVACEDIRAELIGVNALHGSHLGARAEGEPWEVRLRVAARCVDK NDAVRVGNEVETLYTNGPYGGGGASKSVRQVVAVASLFLPRDAVKLQVHIEDMT
Sequences:
>Translated_454_residues MKTIRIGSGAGYSGDRIEPAIELAEHGELDYLVFECLAERTIALAQQSRLVDPSAGYDPLLSERMRRVLPFVGKGTDGTR RRLRIITNMGAANPLGAASEIRRIAAELGLSGLKVAALTGDDVLAALLQQPDQTLDNGRSLRSLGDRLISANAYLGVEGI IQALRADADVIVTGRVADPSLFLAAQMFEFGWAEDDWALLGRGTLVGHLLECAGQVSGGYFADPGFKDVPDLDRLGFPLA EIDAAGNALISKVAGSGGRIDTATCTEQMLYEVHDPAAYLTPDVSADFTHAAFESIARNEVRVQGADGHARPETLKVSVG FLDGWIGEGQMSYGGPGALARGLLAKDIVLKRLALTGVACEDIRAELIGVNALHGSHLGARAEGEPWEVRLRVAARCVDK NDAVRVGNEVETLYTNGPYGGGGASKSVRQVVAVASLFLPRDAVKLQVHIEDMT >Mature_454_residues MKTIRIGSGAGYSGDRIEPAIELAEHGELDYLVFECLAERTIALAQQSRLVDPSAGYDPLLSERMRRVLPFVGKGTDGTR RRLRIITNMGAANPLGAASEIRRIAAELGLSGLKVAALTGDDVLAALLQQPDQTLDNGRSLRSLGDRLISANAYLGVEGI IQALRADADVIVTGRVADPSLFLAAQMFEFGWAEDDWALLGRGTLVGHLLECAGQVSGGYFADPGFKDVPDLDRLGFPLA EIDAAGNALISKVAGSGGRIDTATCTEQMLYEVHDPAAYLTPDVSADFTHAAFESIARNEVRVQGADGHARPETLKVSVG FLDGWIGEGQMSYGGPGALARGLLAKDIVLKRLALTGVACEDIRAELIGVNALHGSHLGARAEGEPWEVRLRVAARCVDK NDAVRVGNEVETLYTNGPYGGGGASKSVRQVVAVASLFLPRDAVKLQVHIEDMT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48179; Mature: 48179
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTIRIGSGAGYSGDRIEPAIELAEHGELDYLVFECLAERTIALAQQSRLVDPSAGYDPL CCEEEECCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH LSERMRRVLPFVGKGTDGTRRRLRIITNMGAANPLGAASEIRRIAAELGLSGLKVAALTG HHHHHHHHCCCCCCCCCCHHHHHHHEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECC DDVLAALLQQPDQTLDNGRSLRSLGDRLISANAYLGVEGIIQALRADADVIVTGRVADPS HHHHHHHHHCCHHHHHCCHHHHHHHHHHHHCCCEECHHHHHHHHHCCCCEEEECCCCCCH LFLAAQMFEFGWAEDDWALLGRGTLVGHLLECAGQVSGGYFADPGFKDVPDLDRLGFPLA HHHHHHHHHCCCCCCCHHEEECHHHHHHHHHHHHCCCCCEECCCCCCCCCCHHHHCCCHH EIDAAGNALISKVAGSGGRIDTATCTEQMLYEVHDPAAYLTPDVSADFTHAAFESIARNE HHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHCCC VRVQGADGHARPETLKVSVGFLDGWIGEGQMSYGGPGALARGLLAKDIVLKRLALTGVAC EEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHH EDIRAELIGVNALHGSHLGARAEGEPWEVRLRVAARCVDKNDAVRVGNEVETLYTNGPYG HHHHHHHEEEEEECCCCCCCCCCCCCCEEEEEEHHHHCCCCCCEECCCCEEEEEECCCCC GGGASKSVRQVVAVASLFLPRDAVKLQVHIEDMT CCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCC >Mature Secondary Structure MKTIRIGSGAGYSGDRIEPAIELAEHGELDYLVFECLAERTIALAQQSRLVDPSAGYDPL CCEEEECCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH LSERMRRVLPFVGKGTDGTRRRLRIITNMGAANPLGAASEIRRIAAELGLSGLKVAALTG HHHHHHHHCCCCCCCCCCHHHHHHHEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECC DDVLAALLQQPDQTLDNGRSLRSLGDRLISANAYLGVEGIIQALRADADVIVTGRVADPS HHHHHHHHHCCHHHHHCCHHHHHHHHHHHHCCCEECHHHHHHHHHCCCCEEEECCCCCCH LFLAAQMFEFGWAEDDWALLGRGTLVGHLLECAGQVSGGYFADPGFKDVPDLDRLGFPLA HHHHHHHHHCCCCCCCHHEEECHHHHHHHHHHHHCCCCCEECCCCCCCCCCHHHHCCCHH EIDAAGNALISKVAGSGGRIDTATCTEQMLYEVHDPAAYLTPDVSADFTHAAFESIARNE HHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHCCC VRVQGADGHARPETLKVSVGFLDGWIGEGQMSYGGPGALARGLLAKDIVLKRLALTGVAC EEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHH EDIRAELIGVNALHGSHLGARAEGEPWEVRLRVAARCVDKNDAVRVGNEVETLYTNGPYG HHHHHHHEEEEEECCCCCCCCCCCCCCEEEEEEHHHHCCCCCCEECCCCEEEEEECCCCC GGGASKSVRQVVAVASLFLPRDAVKLQVHIEDMT CCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA