| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045902
Identifier: 66045902
GI number: 66045902
Start: 3236226
End: 3236753
Strand: Reverse
Name: 66045902
Synonym: Psyr_2666
Alternate gene names: NA
Gene position: 3236753-3236226 (Counterclockwise)
Preceding gene: 66045903
Following gene: 66045900
Centisome position: 53.12
GC content: 51.7
Gene sequence:
>528_bases ATGCAACTCATTACCGAAATCATTCATCCCGACCTGAAGTCCACACAGGGCAGAATATTCCGACGCCATGCGGCACGCGG CATCGTATTGAGGGATGAGAAAATCCTTTTACTCTTTACTGAACGCTATAACGACTTCAGTTTTCCCGGTGGCGGCCTTG ATGCAAACGAGGACATTGTTACTGGTCTGAAGCGTGAGCTTGAAGAAGAGACGGGCGCTCGCGAAATCCAGGTGCTCGAG CATTATGGTTACATCGAGGAGTACCGGCCCTATTGGAAGCCCCAGTATGATCTGATGCACATGACCTCGCATTTCTATCT GTGCGATGTCGCGCACCAGTTAGAGCCCGTGAGGATGGAAAGCCATGAAATAGCCAATGGCATGCAGCCCGTCTGGATCG GCGTAACTGAAGCCATCGCCCATAATGAGGCTGTTATGCAGCGCCAGGAGTCTTCGATGGGGCAGTCCATACAGCGCGAG ACCTTTATGCTGAGAAAAGTTGAAGCAGAGTTGATCGTCAGTCGGTGA
Upstream 100 bases:
>100_bases TCAATTGCTGGAGGATCTGCGCACCCTCGGCAATCACAGCCGTTGATTTGCTATTGGTACGATGATTCGAATTCCCCTGT TCACTTGAAATGAAGACCCG
Downstream 100 bases:
>100_bases GTGTTTTCTGCCTGAGGCAAGTGTGGGCGGAGGTGCTTTTTGGTGTTGGTTGATAACTCAACTAAATGACTGTTTAGTTG AGTTATCAATCTCAGGGGTT
Product: NUDIX hydrolase
Products: NA
Alternate protein names: MutT/Nudix Family Protein; MutT/NUDIX Family Protein; Nudix Hydrolase Protein; Phosphohydrolase; NTP Pyrophosphohydrolase; NUDIX Hydrolase Superfamily Protein; MutT/NUDIX Protein; Nudix Hydrolase
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MQLITEIIHPDLKSTQGRIFRRHAARGIVLRDEKILLLFTERYNDFSFPGGGLDANEDIVTGLKRELEEETGAREIQVLE HYGYIEEYRPYWKPQYDLMHMTSHFYLCDVAHQLEPVRMESHEIANGMQPVWIGVTEAIAHNEAVMQRQESSMGQSIQRE TFMLRKVEAELIVSR
Sequences:
>Translated_175_residues MQLITEIIHPDLKSTQGRIFRRHAARGIVLRDEKILLLFTERYNDFSFPGGGLDANEDIVTGLKRELEEETGAREIQVLE HYGYIEEYRPYWKPQYDLMHMTSHFYLCDVAHQLEPVRMESHEIANGMQPVWIGVTEAIAHNEAVMQRQESSMGQSIQRE TFMLRKVEAELIVSR >Mature_175_residues MQLITEIIHPDLKSTQGRIFRRHAARGIVLRDEKILLLFTERYNDFSFPGGGLDANEDIVTGLKRELEEETGAREIQVLE HYGYIEEYRPYWKPQYDLMHMTSHFYLCDVAHQLEPVRMESHEIANGMQPVWIGVTEAIAHNEAVMQRQESSMGQSIQRE TFMLRKVEAELIVSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20448; Mature: 20448
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLITEIIHPDLKSTQGRIFRRHAARGIVLRDEKILLLFTERYNDFSFPGGGLDANEDIV CCHHHHHHCCCCCCHHHHHHHHHHHCCEEEECCEEEEEEECCCCCCCCCCCCCCCCHHHH TGLKRELEEETGAREIQVLEHYGYIEEYRPYWKPQYDLMHMTSHFYLCDVAHQLEPVRME HHHHHHHHHHCCHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC SHEIANGMQPVWIGVTEAIAHNEAVMQRQESSMGQSIQRETFMLRKVEAELIVSR HHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQLITEIIHPDLKSTQGRIFRRHAARGIVLRDEKILLLFTERYNDFSFPGGGLDANEDIV CCHHHHHHCCCCCCHHHHHHHHHHHCCEEEECCEEEEEEECCCCCCCCCCCCCCCCHHHH TGLKRELEEETGAREIQVLEHYGYIEEYRPYWKPQYDLMHMTSHFYLCDVAHQLEPVRME HHHHHHHHHHCCHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC SHEIANGMQPVWIGVTEAIAHNEAVMQRQESSMGQSIQRETFMLRKVEAELIVSR HHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA