| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045894
Identifier: 66045894
GI number: 66045894
Start: 3228318
End: 3229451
Strand: Reverse
Name: 66045894
Synonym: Psyr_2658
Alternate gene names: NA
Gene position: 3229451-3228318 (Counterclockwise)
Preceding gene: 66045895
Following gene: 66045892
Centisome position: 53.0
GC content: 49.74
Gene sequence:
>1134_bases ATGGATGCGCTGATCGGCGGCTGCGATGTCATCCAAGGCTATGTGCGCGCTCTTTCAAAGAATGAAGCGAGGCACTATAG GCCAGAGCTGTCGTTCTATCTTGCGACCTTGCACACTCGCTTGTTGTCCACCGTGCTGCTCGTCAACTTCAAGCACGGGC TGTCTGGTGTGTACCCCGACCAGACGTCCGAGGATCCGCTAGGTGATCGCGACCTACACCTACAGGCCATCTCTAACATA GAAGCTCAGGACGGCACGCTTCGAGACGCTGGCTCGTATGAAAAAATGGCGTTACTCAATGCGACATACGCTATTAGAAC CGCGCACGTTATGCCAGGTGGTCACATCGGGGCACGTGAATTAATTACCGCTTTCGTGCCCCACTACCTTGATCAGATCG AACGACTGATGTACCCGCAATGGTATGTCGCCTGCTTCATGAAAGAGTGCAATAACTCGGCGATTTGGGGTAGCTATGGT GATAATCATAGGGGAATCTGTTTGAGATATCGCGTTCTCGGCGACGCGCCCTCAATGACCATGGAAATGAATAAGCCAGA CGGCAGAGGATACAACGGTATCTCTCACAGCTTCCAAAACATGAGCTTCAAAGAGGTGTTTTATGATCGAGAATTTTCAG AGATGGACTTCTTCAGATTCCTCGGTAACGTTTCGAATGAAGCTCTGAGTGGCTTCTGGTACAGCGATACCCAAGGAAAT CTCAGCAGCAAAAGCGAGTGGTTGAGATCCCACTCGAATGAGCTTTGGATGGAACACCACCAAAATATCGATTTCGCGCT GACGTCCAAGCTTCCTCAATGGGGATCAGAAAAAGAGTATCGCCTGGTGCTGAGTTCCTACCTCGATATTTCCGACAAAA AGCACCGGATCTTCAAGTACCGTTTCACAAGCCTGGATGGCCTGATTTTTGGCATCAAGACTCCGCTGGAAGACAAGCTG AAATGCATCCGAATAATCAGAGCCCACTGCGAGCGAGAAGGCATTGAGTCGTTCAATTTCTATCAGGCTTACTATGATCC GCAGACTAAATCCATCGAACATGGATTGCTACCCATCACCCTTTATGAAGCTGATCCTGAGTCCGAAGAACCGTCAGGCC GCGAAGATTTTTAA
Upstream 100 bases:
>100_bases GGATGAAGCGGTGCGACTCGGAACACCCCTGCCAAAAAATCTTCCCATAGAGCAGTACCCTTCCAACCTACGTGGAGCTT TCCAGGCCGGGTACCAAGAG
Downstream 100 bases:
>100_bases CGTTGCGGTACCTATGAGCACTGCCCGTCTCCAAGGTTATGGGCCACCTATGAGAGCCGGCTTCTTGCTTTTTTGCAAGG GAGCTATTTGTCCTTAGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MDALIGGCDVIQGYVRALSKNEARHYRPELSFYLATLHTRLLSTVLLVNFKHGLSGVYPDQTSEDPLGDRDLHLQAISNI EAQDGTLRDAGSYEKMALLNATYAIRTAHVMPGGHIGARELITAFVPHYLDQIERLMYPQWYVACFMKECNNSAIWGSYG DNHRGICLRYRVLGDAPSMTMEMNKPDGRGYNGISHSFQNMSFKEVFYDREFSEMDFFRFLGNVSNEALSGFWYSDTQGN LSSKSEWLRSHSNELWMEHHQNIDFALTSKLPQWGSEKEYRLVLSSYLDISDKKHRIFKYRFTSLDGLIFGIKTPLEDKL KCIRIIRAHCEREGIESFNFYQAYYDPQTKSIEHGLLPITLYEADPESEEPSGREDF
Sequences:
>Translated_377_residues MDALIGGCDVIQGYVRALSKNEARHYRPELSFYLATLHTRLLSTVLLVNFKHGLSGVYPDQTSEDPLGDRDLHLQAISNI EAQDGTLRDAGSYEKMALLNATYAIRTAHVMPGGHIGARELITAFVPHYLDQIERLMYPQWYVACFMKECNNSAIWGSYG DNHRGICLRYRVLGDAPSMTMEMNKPDGRGYNGISHSFQNMSFKEVFYDREFSEMDFFRFLGNVSNEALSGFWYSDTQGN LSSKSEWLRSHSNELWMEHHQNIDFALTSKLPQWGSEKEYRLVLSSYLDISDKKHRIFKYRFTSLDGLIFGIKTPLEDKL KCIRIIRAHCEREGIESFNFYQAYYDPQTKSIEHGLLPITLYEADPESEEPSGREDF >Mature_377_residues MDALIGGCDVIQGYVRALSKNEARHYRPELSFYLATLHTRLLSTVLLVNFKHGLSGVYPDQTSEDPLGDRDLHLQAISNI EAQDGTLRDAGSYEKMALLNATYAIRTAHVMPGGHIGARELITAFVPHYLDQIERLMYPQWYVACFMKECNNSAIWGSYG DNHRGICLRYRVLGDAPSMTMEMNKPDGRGYNGISHSFQNMSFKEVFYDREFSEMDFFRFLGNVSNEALSGFWYSDTQGN LSSKSEWLRSHSNELWMEHHQNIDFALTSKLPQWGSEKEYRLVLSSYLDISDKKHRIFKYRFTSLDGLIFGIKTPLEDKL KCIRIIRAHCEREGIESFNFYQAYYDPQTKSIEHGLLPITLYEADPESEEPSGREDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43421; Mature: 43421
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDALIGGCDVIQGYVRALSKNEARHYRPELSFYLATLHTRLLSTVLLVNFKHGLSGVYPD CCCCHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC QTSEDPLGDRDLHLQAISNIEAQDGTLRDAGSYEKMALLNATYAIRTAHVMPGGHIGARE CCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHEEEEEECCCCCCCHHH LITAFVPHYLDQIERLMYPQWYVACFMKECNNSAIWGSYGDNHRGICLRYRVLGDAPSMT HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEECCCCCCCCCEEEEEEEECCCCCCE MEMNKPDGRGYNGISHSFQNMSFKEVFYDREFSEMDFFRFLGNVSNEALSGFWYSDTQGN EEECCCCCCCCCCHHHHHHCCCHHHHHHCCCCHHHHHHHHHHCCCHHHHCCCEECCCCCC LSSKSEWLRSHSNELWMEHHQNIDFALTSKLPQWGSEKEYRLVLSSYLDISDKKHRIFKY CCHHHHHHHHCCHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEE RFTSLDGLIFGIKTPLEDKLKCIRIIRAHCEREGIESFNFYQAYYDPQTKSIEHGLLPIT EECCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHEEECCCCCCCCCCCEEEE LYEADPESEEPSGREDF EEECCCCCCCCCCCCCC >Mature Secondary Structure MDALIGGCDVIQGYVRALSKNEARHYRPELSFYLATLHTRLLSTVLLVNFKHGLSGVYPD CCCCHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC QTSEDPLGDRDLHLQAISNIEAQDGTLRDAGSYEKMALLNATYAIRTAHVMPGGHIGARE CCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHEEEEEECCCCCCCHHH LITAFVPHYLDQIERLMYPQWYVACFMKECNNSAIWGSYGDNHRGICLRYRVLGDAPSMT HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEECCCCCCCCCEEEEEEEECCCCCCE MEMNKPDGRGYNGISHSFQNMSFKEVFYDREFSEMDFFRFLGNVSNEALSGFWYSDTQGN EEECCCCCCCCCCHHHHHHCCCHHHHHHCCCCHHHHHHHHHHCCCHHHHCCCEECCCCCC LSSKSEWLRSHSNELWMEHHQNIDFALTSKLPQWGSEKEYRLVLSSYLDISDKKHRIFKY CCHHHHHHHHCCHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEE RFTSLDGLIFGIKTPLEDKLKCIRIIRAHCEREGIESFNFYQAYYDPQTKSIEHGLLPIT EECCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHEEECCCCCCCCCCCEEEE LYEADPESEEPSGREDF EEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA