| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is fecR [H]
Identifier: 66045817
GI number: 66045817
Start: 3022506
End: 3023471
Strand: Direct
Name: fecR [H]
Synonym: Psyr_2581
Alternate gene names: 66045817
Gene position: 3022506-3023471 (Clockwise)
Preceding gene: 66045816
Following gene: 66045818
Centisome position: 49.6
GC content: 63.66
Gene sequence:
>966_bases GTGATTCGCCCGGCACCTTCGAACGAAGAACGCGAGGTAGTACGCAAAGCGGCGCAGTGGCTGGCGCTTCTCGAGTCCGG CGGTGCCAGCGAGGAAGATCACGCCATGCTGCAACACTGGCGTGACAGCTCCGCCAGTCATGAGCGCGCCTGGCAAAAGG CCCAGCAGTTGCGTCAACGTTTTTTCGGTCTGCCTGCCAACCTGGCCATGGCGACGCTGGATCGCCCTGACAAGGCCAGG CGCGCGACGCTAAAAAGGGCGCTGGGCGCCGTGGCACTGGTTCCCGCGGTCTGGCTGCTGGGGCGTCAGTTGCCGCTGGA GGTCTGGCGTGCCGACCTGCAAACCGCCGTCGGCGAGCACAAGCGTCTGTCGCTGGCCGATGGCAGCACGTTGCAATTGA ATACCGACAGCGCCGTAAACGTCGATATGGGCGCCCGGCGAATCACCCTTGTACGGGGCGAAATAGCCCTGAAGGTGCCT GGCAGCGCGCCGCTGACCATCCACGGTCCTTACGGGCGCATCGTGGTTGGTCGGAGCGAAGTCTGTGTGCGTCTCAATGA CAGCGACTGCCGGGTTTCGGTCGTCAGCGGCACGGTGCAGCTTTATCCCCTGCGCGGGCCTGTAGTGGCCTTGAATGCGC AGCAGCAGGTCAGTTTGAAGCAGAGTGGAGTCGGTCCTGTCAGCGCCTTCGACGCCTTGCTGCCTGGCTGGCGCGACGAT GTACTGACCGCGCAGAACCAGTCGCTGGGTGATTTCCTGCGCGAGCTGGGTCGCTACCGTCCGGGCCTGCTGCGCTGGGA GCCGGCGCTGGAAAACCTTCGGGTGACCGGCAGTTTCAGGCTCGACAATACCGACCGCGTGCTGTCCTTGCTGGCGGCCA GTCTGCCGGTGGACGTGCAGATGCGCACCCGTTACTGGGTGACCCTGGTGCCTCGAAAAAACATTTCGACAAAAAATAGT GCGTAG
Upstream 100 bases:
>100_bases GGCTGGGCTATCGGGAAATCGCTGAACGCCTGAGTGTTTCCGAACGCACCGTCAAACGCTATATGGCACAAGCCTACGAG CACTGTCTGTTGGTGGACTG
Downstream 100 bases:
>100_bases CGCTGTCCCTTTTTTTGGTCTCGCTGGTCATTCCAGATAAGTGCACAAAAAATACGAGAGCTTCCCTCTATGTCCGCAGT GTCTTCCTACCGTTTGCGTC
Product: FecR protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MIRPAPSNEEREVVRKAAQWLALLESGGASEEDHAMLQHWRDSSASHERAWQKAQQLRQRFFGLPANLAMATLDRPDKAR RATLKRALGAVALVPAVWLLGRQLPLEVWRADLQTAVGEHKRLSLADGSTLQLNTDSAVNVDMGARRITLVRGEIALKVP GSAPLTIHGPYGRIVVGRSEVCVRLNDSDCRVSVVSGTVQLYPLRGPVVALNAQQQVSLKQSGVGPVSAFDALLPGWRDD VLTAQNQSLGDFLRELGRYRPGLLRWEPALENLRVTGSFRLDNTDRVLSLLAASLPVDVQMRTRYWVTLVPRKNISTKNS A
Sequences:
>Translated_321_residues MIRPAPSNEEREVVRKAAQWLALLESGGASEEDHAMLQHWRDSSASHERAWQKAQQLRQRFFGLPANLAMATLDRPDKAR RATLKRALGAVALVPAVWLLGRQLPLEVWRADLQTAVGEHKRLSLADGSTLQLNTDSAVNVDMGARRITLVRGEIALKVP GSAPLTIHGPYGRIVVGRSEVCVRLNDSDCRVSVVSGTVQLYPLRGPVVALNAQQQVSLKQSGVGPVSAFDALLPGWRDD VLTAQNQSLGDFLRELGRYRPGLLRWEPALENLRVTGSFRLDNTDRVLSLLAASLPVDVQMRTRYWVTLVPRKNISTKNS A >Mature_321_residues MIRPAPSNEEREVVRKAAQWLALLESGGASEEDHAMLQHWRDSSASHERAWQKAQQLRQRFFGLPANLAMATLDRPDKAR RATLKRALGAVALVPAVWLLGRQLPLEVWRADLQTAVGEHKRLSLADGSTLQLNTDSAVNVDMGARRITLVRGEIALKVP GSAPLTIHGPYGRIVVGRSEVCVRLNDSDCRVSVVSGTVQLYPLRGPVVALNAQQQVSLKQSGVGPVSAFDALLPGWRDD VLTAQNQSLGDFLRELGRYRPGLLRWEPALENLRVTGSFRLDNTDRVLSLLAASLPVDVQMRTRYWVTLVPRKNISTKNS A
Specific function: Regulation of iron dicitrate transport. In the absence of citrate fecR inactivates fecI. FecR is probably a sensor that recognizes iron dicitrate in the periplasm [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790745, Length=317, Percent_Identity=31.8611987381703, Blast_Score=153, Evalue=1e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006860 - InterPro: IPR012373 [H]
Pfam domain/function: PF04773 FecR [H]
EC number: NA
Molecular weight: Translated: 35422; Mature: 35422
Theoretical pI: Translated: 10.74; Mature: 10.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRPAPSNEEREVVRKAAQWLALLESGGASEEDHAMLQHWRDSSASHERAWQKAQQLRQR CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH FFGLPANLAMATLDRPDKARRATLKRALGAVALVPAVWLLGRQLPLEVWRADLQTAVGEH HCCCCCHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC KRLSLADGSTLQLNTDSAVNVDMGARRITLVRGEIALKVPGSAPLTIHGPYGRIVVGRSE CEEEECCCCEEEECCCCEEEECCCCEEEEEEECEEEEECCCCCCEEEECCCCEEEEECCE VCVRLNDSDCRVSVVSGTVQLYPLRGPVVALNAQQQVSLKQSGVGPVSAFDALLPGWRDD EEEEECCCCCEEEEEECEEEEEECCCCEEEECCHHHHHHHHCCCCCHHHHHHHCCCCCCC VLTAQNQSLGDFLRELGRYRPGLLRWEPALENLRVTGSFRLDNTDRVLSLLAASLPVDVQ HHCCCCCCHHHHHHHHHHCCCCCEEECCCCCCEEEEEEEEECCHHHHHHHHHHHCCCCEE MRTRYWVTLVPRKNISTKNSA EECEEEEEEEECCCCCCCCCC >Mature Secondary Structure MIRPAPSNEEREVVRKAAQWLALLESGGASEEDHAMLQHWRDSSASHERAWQKAQQLRQR CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH FFGLPANLAMATLDRPDKARRATLKRALGAVALVPAVWLLGRQLPLEVWRADLQTAVGEH HCCCCCHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC KRLSLADGSTLQLNTDSAVNVDMGARRITLVRGEIALKVPGSAPLTIHGPYGRIVVGRSE CEEEECCCCEEEECCCCEEEECCCCEEEEEEECEEEEECCCCCCEEEECCCCEEEEECCE VCVRLNDSDCRVSVVSGTVQLYPLRGPVVALNAQQQVSLKQSGVGPVSAFDALLPGWRDD EEEEECCCCCEEEEEECEEEEEECCCCEEEECCHHHHHHHHCCCCCHHHHHHHCCCCCCC VLTAQNQSLGDFLRELGRYRPGLLRWEPALENLRVTGSFRLDNTDRVLSLLAASLPVDVQ HHCCCCCCHHHHHHHHHHCCCCCEEECCCCCCEEEEEEEEECCHHHHHHHHHHHCCCCEE MRTRYWVTLVPRKNISTKNSA EECEEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2254251; 7610040; 9278503 [H]