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The map label for this gene is rpiB [H]

Identifier: 66045808

GI number: 66045808

Start: 2986599

End: 2987060

Strand: Direct

Name: rpiB [H]

Synonym: Psyr_2572

Alternate gene names: 66045808

Gene position: 2986599-2987060 (Clockwise)

Preceding gene: 66045800

Following gene: 66045809

Centisome position: 49.01

GC content: 59.52

Gene sequence:

>462_bases
ATGAACACACCTTTCCCGGTGGCTATCGGATGTGATGAAGCGGGTTATGAACTCAAGGAATTATTGAAGCGCCATATCGA
GTCGCTGGGTTATCCGGTGACCGATTTCGGTACTCATTCCGCGGCACCGGTGCTTTACCCGGACATCGCCCTGGCCGTGG
CCACAGCGATCAACGCCGGACAGCAGCGGCTTGGCGTGCTGGTCTGCGGGACCGGAATAGGCATGGCCATCTCCGCCAAC
AAGGTCTTCGGCATTCGTGCGGCCCAGGCCCACGATACCTATTCGGCCGAGCGGGCACGCAAGAGCAACGATGCGCAAAT
TCTTTCCATCGGTGCACGGGTGATCGGCACGGAACTGGCGAAAAGCATCGTCAAATCGTTCCTGGAGTCGGAGTTCGAAG
CCGCGCGCTCCGGCGCCAAGGTCGAGCGCATCAACGCGATAGAGCGTGACGGGCATCAATAG

Upstream 100 bases:

>100_bases
CTTGACAGAACCCGGTTAATGTTTCAGAAATGACTGATCGGAATTTCACCGATTGAACATTTGGTCAAATAATAAGACCC
CGGCAGTGGAGCCTGATGCC

Downstream 100 bases:

>100_bases
TCAGTGGACGGGACAGGGCGGGAGTAGGGAGAATGTGCCTTTGACGCCGAAACGGAAGCCAGTCCACATGAGTGACAGTA
CCCAGCGCATGGCCAGCGAC

Product: ribose/galactose isomerase

Products: NA

Alternate protein names: Phosphoriboisomerase B [H]

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MNTPFPVAIGCDEAGYELKELLKRHIESLGYPVTDFGTHSAAPVLYPDIALAVATAINAGQQRLGVLVCGTGIGMAISAN
KVFGIRAAQAHDTYSAERARKSNDAQILSIGARVIGTELAKSIVKSFLESEFEAARSGAKVERINAIERDGHQ

Sequences:

>Translated_153_residues
MNTPFPVAIGCDEAGYELKELLKRHIESLGYPVTDFGTHSAAPVLYPDIALAVATAINAGQQRLGVLVCGTGIGMAISAN
KVFGIRAAQAHDTYSAERARKSNDAQILSIGARVIGTELAKSIVKSFLESEFEAARSGAKVERINAIERDGHQ
>Mature_153_residues
MNTPFPVAIGCDEAGYELKELLKRHIESLGYPVTDFGTHSAAPVLYPDIALAVATAINAGQQRLGVLVCGTGIGMAISAN
KVFGIRAAQAHDTYSAERARKSNDAQILSIGARVIGTELAKSIVKSFLESEFEAARSGAKVERINAIERDGHQ

Specific function: In addition to its activity on D-ribose 5-phosphate it probably also has activity on D-allose 6-phosphate [H]

COG id: COG0698

COG function: function code G; Ribose 5-phosphate isomerase RpiB

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lacAB/rpiB family [H]

Homologues:

Organism=Escherichia coli, GI1790528, Length=143, Percent_Identity=43.3566433566434, Blast_Score=122, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003500
- InterPro:   IPR004785 [H]

Pfam domain/function: PF02502 LacAB_rpiB [H]

EC number: =5.3.1.6 [H]

Molecular weight: Translated: 16254; Mature: 16254

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTPFPVAIGCDEAGYELKELLKRHIESLGYPVTDFGTHSAAPVLYPDIALAVATAINAG
CCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
QQRLGVLVCGTGIGMAISANKVFGIRAAQAHDTYSAERARKSNDAQILSIGARVIGTELA
HHHEEEEEECCCCCEEEECCCEEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHH
KSIVKSFLESEFEAARSGAKVERINAIERDGHQ
HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MNTPFPVAIGCDEAGYELKELLKRHIESLGYPVTDFGTHSAAPVLYPDIALAVATAINAG
CCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
QQRLGVLVCGTGIGMAISANKVFGIRAAQAHDTYSAERARKSNDAQILSIGARVIGTELA
HHHEEEEEECCCCCEEEECCCEEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHH
KSIVKSFLESEFEAARSGAKVERINAIERDGHQ
HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8576032; 7610040; 9278503; 1840580; 7984428; 9401019 [H]