| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045795
Identifier: 66045795
GI number: 66045795
Start: 2972912
End: 2974048
Strand: Direct
Name: 66045795
Synonym: Psyr_2559
Alternate gene names: NA
Gene position: 2972912-2974048 (Clockwise)
Preceding gene: 66045794
Following gene: 66045796
Centisome position: 48.79
GC content: 61.74
Gene sequence:
>1137_bases ATGTCGCAATCCACGACCACGCAGACGGCTATTGTGTTTGGTAGCTGGAAAATCCGTCATCAGGAGCCGTTCGGCAGCGA TGACCACAGGTTGTATGCCATTGCTGCGGACACGGCGTTGCTGGGTGAACTGACCGCCGTCGCTGACCTGCGAGGCCGCC ACCGGGTACTGGCACGCTGGGATGCCGACGGGGCGATGCTCCTTGAGGATTCGCACGGCGCGCTGGGCGACGAAAGCTGC CACAACCTGTCCGGTGCCGCCATCCCGCTGGCGATCATCCGCTTGCAGGCGGACCGGGTGCATATCAGCCATTTGCTCAA TCGCATTGATGTGCATCGTTCGCTGTTCGTACAGCCGCCCCTCGAAATCGAGCAGCCTGCCGTCCCGCAAAACCTGTTGA TCGCGCTGCGCAATGCGTTCGAGCGCAACCATCTGGCGATCAACAATTGGGAATGTCGCTACGCCACCAGCGAACAGACC TACGTCGAGTCCTTCGAGCTGGCACCTGATTGCCATGCGCGAATGCTCGGCGAGGCCTGGTTCGACGCCAGTTTCAGCCC GGTAATGGCGCCGTTCACCAGTCAGTGCGGTGACGAATTTCAGGTCTGGGACCACCAGGTCACCGCCGCCAGGGCGGAAG ACGGTGGTTATGTATGGGTCGAGCACTGCAGCCGCAAACGCAAGCTGGCGGTCAATGAACCCATCGTGCAGCTGTTTCGC AGTGCGCCGGGCAGCCTGTCCGGCACCGTAAGGCACCTGTCGCTGGGCTCCCCGACGCTGGAGGCCATGGCCATGAACAT TGACAGCACGTTGCAGGCGCTTGGCGAGTACCGACGTTACGCGTTCAGTGCCCCGTGCGAATCCGTGGACAGCGGCAACC TCTTCGCGATCACCTTCGAGACCTGCATGCCGCTCGATTCGCAGGCGGGGAGTACGACGCGTGGTGAGGTGCGTTTTCTC AAGTGCCGGGACGCGATAGACCCTCAGTCGATCAATGCCGATCTGCGCAGGCTGATGGAGCATCTGCAGGCATTTCTGAG CGAACGTCGCCAGGAGTGCTGGCCCCTGACTGACCGTTTTGCCTTCCTGCATTCGCCATCACCCTTCATCACCCGCCCGG AGAGCCTGCACTCATGA
Upstream 100 bases:
>100_bases GGCGGAGCGGCACCCGCCGTTTCAGCAGGATCTCTATTCGAAACTCGACTTTGCCCGTGAGGCGAGTCGGCTCTGAATTC ACTTTGCCGGGGAGATGACC
Downstream 100 bases:
>100_bases GCCGTTATCTTTGCAATGGACGCTATCGATTTGAACTGGACGATCAGACCTCGGGCTCGGCACTGGCCCAGCGGCTGCGG GTGTTCCTTGCGCCTTACTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MSQSTTTQTAIVFGSWKIRHQEPFGSDDHRLYAIAADTALLGELTAVADLRGRHRVLARWDADGAMLLEDSHGALGDESC HNLSGAAIPLAIIRLQADRVHISHLLNRIDVHRSLFVQPPLEIEQPAVPQNLLIALRNAFERNHLAINNWECRYATSEQT YVESFELAPDCHARMLGEAWFDASFSPVMAPFTSQCGDEFQVWDHQVTAARAEDGGYVWVEHCSRKRKLAVNEPIVQLFR SAPGSLSGTVRHLSLGSPTLEAMAMNIDSTLQALGEYRRYAFSAPCESVDSGNLFAITFETCMPLDSQAGSTTRGEVRFL KCRDAIDPQSINADLRRLMEHLQAFLSERRQECWPLTDRFAFLHSPSPFITRPESLHS
Sequences:
>Translated_378_residues MSQSTTTQTAIVFGSWKIRHQEPFGSDDHRLYAIAADTALLGELTAVADLRGRHRVLARWDADGAMLLEDSHGALGDESC HNLSGAAIPLAIIRLQADRVHISHLLNRIDVHRSLFVQPPLEIEQPAVPQNLLIALRNAFERNHLAINNWECRYATSEQT YVESFELAPDCHARMLGEAWFDASFSPVMAPFTSQCGDEFQVWDHQVTAARAEDGGYVWVEHCSRKRKLAVNEPIVQLFR SAPGSLSGTVRHLSLGSPTLEAMAMNIDSTLQALGEYRRYAFSAPCESVDSGNLFAITFETCMPLDSQAGSTTRGEVRFL KCRDAIDPQSINADLRRLMEHLQAFLSERRQECWPLTDRFAFLHSPSPFITRPESLHS >Mature_377_residues SQSTTTQTAIVFGSWKIRHQEPFGSDDHRLYAIAADTALLGELTAVADLRGRHRVLARWDADGAMLLEDSHGALGDESCH NLSGAAIPLAIIRLQADRVHISHLLNRIDVHRSLFVQPPLEIEQPAVPQNLLIALRNAFERNHLAINNWECRYATSEQTY VESFELAPDCHARMLGEAWFDASFSPVMAPFTSQCGDEFQVWDHQVTAARAEDGGYVWVEHCSRKRKLAVNEPIVQLFRS APGSLSGTVRHLSLGSPTLEAMAMNIDSTLQALGEYRRYAFSAPCESVDSGNLFAITFETCMPLDSQAGSTTRGEVRFLK CRDAIDPQSINADLRRLMEHLQAFLSERRQECWPLTDRFAFLHSPSPFITRPESLHS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42299; Mature: 42168
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSTTTQTAIVFGSWKIRHQEPFGSDDHRLYAIAADTALLGELTAVADLRGRHRVLARW CCCCCCCEEEEEEEEEEEEECCCCCCCCCEEEEEEECHHHHHHHHHHHHHCCCCEEEEEE DADGAMLLEDSHGALGDESCHNLSGAAIPLAIIRLQADRVHISHLLNRIDVHRSLFVQPP CCCCEEEEECCCCCCCCCHHCCCCCCHHEEEEEEEECCHHHHHHHHHHHHHHHHEEECCC LEIEQPAVPQNLLIALRNAFERNHLAINNWECRYATSEQTYVESFELAPDCHARMLGEAW CCCCCCCCCHHHHHHHHHHHCCCCEEECCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHH FDASFSPVMAPFTSQCGDEFQVWDHQVTAARAEDGGYVWVEHCSRKRKLAVNEPIVQLFR CCCCCCCHHCCHHHHCCCCHHHHCCEEEEEECCCCCEEEEEHHCCCCCCCCCHHHHHHHH SAPGSLSGTVRHLSLGSPTLEAMAMNIDSTLQALGEYRRYAFSAPCESVDSGNLFAITFE CCCCCCCCEEEEEECCCCHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEH TCMPLDSQAGSTTRGEVRFLKCRDAIDPQSINADLRRLMEHLQAFLSERRQECWPLTDRF HCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHE AFLHSPSPFITRPESLHS EEEECCCCCCCCCHHHCC >Mature Secondary Structure SQSTTTQTAIVFGSWKIRHQEPFGSDDHRLYAIAADTALLGELTAVADLRGRHRVLARW CCCCCCEEEEEEEEEEEEECCCCCCCCCEEEEEEECHHHHHHHHHHHHHCCCCEEEEEE DADGAMLLEDSHGALGDESCHNLSGAAIPLAIIRLQADRVHISHLLNRIDVHRSLFVQPP CCCCEEEEECCCCCCCCCHHCCCCCCHHEEEEEEEECCHHHHHHHHHHHHHHHHEEECCC LEIEQPAVPQNLLIALRNAFERNHLAINNWECRYATSEQTYVESFELAPDCHARMLGEAW CCCCCCCCCHHHHHHHHHHHCCCCEEECCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHH FDASFSPVMAPFTSQCGDEFQVWDHQVTAARAEDGGYVWVEHCSRKRKLAVNEPIVQLFR CCCCCCCHHCCHHHHCCCCHHHHCCEEEEEECCCCCEEEEEHHCCCCCCCCCHHHHHHHH SAPGSLSGTVRHLSLGSPTLEAMAMNIDSTLQALGEYRRYAFSAPCESVDSGNLFAITFE CCCCCCCCEEEEEECCCCHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEH TCMPLDSQAGSTTRGEVRFLKCRDAIDPQSINADLRRLMEHLQAFLSERRQECWPLTDRF HCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHE AFLHSPSPFITRPESLHS EEEECCCCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA