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The map label for this gene is dcd [H]

Identifier: 66045792

GI number: 66045792

Start: 2969153

End: 2969827

Strand: Direct

Name: dcd [H]

Synonym: Psyr_2556

Alternate gene names: 66045792

Gene position: 2969153-2969827 (Clockwise)

Preceding gene: 66045791

Following gene: 66045793

Centisome position: 48.72

GC content: 57.48

Gene sequence:

>675_bases
ATGATATTGACCGGTAGTGAAATCGAAAATCGCGTGCGTTCGGGTGAAATCGTCATCAGTCCGTTTTCCCATGAGAACGT
CAACCCCAACAGCTACAACTTCCGCCTGCATGACCAGATGAAGGTCTACGAAGACGATGTGATCGATGTGCGCGCCGAGG
CGTCGACGCGAACCATCGAGATCGGTCCGGAAGGCTTTGAATTGCAGCCCATGAAGCTGTATCTGGCCTCGACCATAGAA
ACCATGGGCAGCACCCATTTCGTACCTACCTATGCGGCTCGCTCTTCGATCGCCAGGCTGGGCATGTTCATCAACCTCTC
GGCGCCACTGGGCGACATCGGTTTCGTCGGGCGCTGGACCTTGCAGCTGTATGCGCTCAACCGCATACGGGTTTACCCCG
GCATGAACATCGGTCAAATGATGTTCTGGAACGTCAAGGGCGATATCGAGCTGTATTCCGGAAAGTACCAGGGCGCGACC
GAGGCTTTCGCGTCCCGCATCTTCATGGATTTCGAAAAGACGCCGCGTCCACAGCCGCTGGTGCCCAACCTTGCGCCATT
TCCCGTTGTAGCAGCCCAGGAAGAGGTCGATGCCTCGCCCGATGCGCTGGCCGCCAGGCACGGGCGAATGGCCACCGAGA
TTCCACTGATAGCAGGAGGCCGTCGTGTCCAGTAA

Upstream 100 bases:

>100_bases
AGGTCTGCTTCTGGGCGAACTTCGGCATGACCACCTGCTACGCGGGACGCTACTTGGGCTCCAAGAGCACCGTGCCCTCG
AAAATCATTCTGGATTGACC

Downstream 100 bases:

>100_bases
ATACTTGACCTTGAAACATCTGGCCGGTGATCTGCCGGTGCCCGCGCTGAGCGCTCTGCATGATGCCGATTACCGCGTGT
TATGGCAGGACTTTGCAAAC

Product: deoxycytidine triphosphate deaminase

Products: NA

Alternate protein names: dCTP deaminase [H]

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MILTGSEIENRVRSGEIVISPFSHENVNPNSYNFRLHDQMKVYEDDVIDVRAEASTRTIEIGPEGFELQPMKLYLASTIE
TMGSTHFVPTYAARSSIARLGMFINLSAPLGDIGFVGRWTLQLYALNRIRVYPGMNIGQMMFWNVKGDIELYSGKYQGAT
EAFASRIFMDFEKTPRPQPLVPNLAPFPVVAAQEEVDASPDALAARHGRMATEIPLIAGGRRVQ

Sequences:

>Translated_224_residues
MILTGSEIENRVRSGEIVISPFSHENVNPNSYNFRLHDQMKVYEDDVIDVRAEASTRTIEIGPEGFELQPMKLYLASTIE
TMGSTHFVPTYAARSSIARLGMFINLSAPLGDIGFVGRWTLQLYALNRIRVYPGMNIGQMMFWNVKGDIELYSGKYQGAT
EAFASRIFMDFEKTPRPQPLVPNLAPFPVVAAQEEVDASPDALAARHGRMATEIPLIAGGRRVQ
>Mature_224_residues
MILTGSEIENRVRSGEIVISPFSHENVNPNSYNFRLHDQMKVYEDDVIDVRAEASTRTIEIGPEGFELQPMKLYLASTIE
TMGSTHFVPTYAARSSIARLGMFINLSAPLGDIGFVGRWTLQLYALNRIRVYPGMNIGQMMFWNVKGDIELYSGKYQGAT
EAFASRIFMDFEKTPRPQPLVPNLAPFPVVAAQEEVDASPDALAARHGRMATEIPLIAGGRRVQ

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011962 [H]

Pfam domain/function: NA

EC number: =3.5.4.13 [H]

Molecular weight: Translated: 24984; Mature: 24984

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILTGSEIENRVRSGEIVISPFSHENVNPNSYNFRLHDQMKVYEDDVIDVRAEASTRTIE
CEECCHHHHHHHCCCCEEEECCCCCCCCCCCEEEEECCCEEEECCCEEEEEECCCCEEEE
IGPEGFELQPMKLYLASTIETMGSTHFVPTYAARSSIARLGMFINLSAPLGDIGFVGRWT
ECCCCCEECHHHHHHHHHHHHHCCCCEEECHHHHHHHHHEEEEEECCCCCCCCCCCEEEE
LQLYALNRIRVYPGMNIGQMMFWNVKGDIELYSGKYQGATEAFASRIFMDFEKTPRPQPL
EEEEEEEEEEECCCCCCCCEEEEEECCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCC
VPNLAPFPVVAAQEEVDASPDALAARHGRMATEIPLIAGGRRVQ
CCCCCCCCEEECHHHCCCCCHHHHHHCCCCEECCEEECCCCCCC
>Mature Secondary Structure
MILTGSEIENRVRSGEIVISPFSHENVNPNSYNFRLHDQMKVYEDDVIDVRAEASTRTIE
CEECCHHHHHHHCCCCEEEECCCCCCCCCCCEEEEECCCEEEECCCEEEEEECCCCEEEE
IGPEGFELQPMKLYLASTIETMGSTHFVPTYAARSSIARLGMFINLSAPLGDIGFVGRWT
ECCCCCEECHHHHHHHHHHHHHCCCCEEECHHHHHHHHHEEEEEECCCCCCCCCCCEEEE
LQLYALNRIRVYPGMNIGQMMFWNVKGDIELYSGKYQGATEAFASRIFMDFEKTPRPQPL
EEEEEEEEEEECCCCCCCCEEEEEECCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCC
VPNLAPFPVVAAQEEVDASPDALAARHGRMATEIPLIAGGRRVQ
CCCCCCCCEEECHHHCCCCCHHHHHHCCCCEECCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9922257 [H]