| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045786
Identifier: 66045786
GI number: 66045786
Start: 2964184
End: 2964738
Strand: Direct
Name: 66045786
Synonym: Psyr_2550
Alternate gene names: NA
Gene position: 2964184-2964738 (Clockwise)
Preceding gene: 66045785
Following gene: 66045787
Centisome position: 48.64
GC content: 60.54
Gene sequence:
>555_bases ATGATTGCCAGCACACAAGCAGCCGTTCGCCAGTGGTTTCCCCGGCTCGCTGGCGGCTATGTATACCCGGCGGGCCTCTA CACGAAAAAGCTGATATCAGTGGCCTGGTTGCTCATGACCGAGCTTGAGGCGTATCTGGAAGACCTCGAAGGCGCCGCGG ACGAGCCGCTGGTGGTGGATGCATTGAGAATCAAGCTGGCTGAACTGATGGTCGACATCGACTGCCGTCTTGCAGGGGCC GACACCCCGAACGAGCTGCACCAGTTCGCGTTGTTCAGCGAGTACGGCCTGACCGACGTGATTGCCCACACAGGCCCGGT CGCCGTCGAATGGCTCGGCGTTGCCGCTGACAGCGCTGCAGGTCACGACCATGAAGCAGAGCGGCTGATCGAACTGTTCA AGGAACTGCTGGAAGCCTTTCCCGGAAAATTGTTCAACCCCTTGCTGCCGGGCACTCAGGGTCAGGTGTTGCGAACCCTG CGCGACTGGGACCGCTCCTGCCGCCTGGCAGGTGGTGATGCTGCCTTTCTGGCACCTTTGATGAGGTCTCTATGA
Upstream 100 bases:
>100_bases AGCAATCCCGGGAAGAGGCTGCGTATTTCCTGCGCGCCGCACGGGCCGGGCTGGTCAGTTTCTCACTCAAGGATCAACAC CCTATGCAGGGAGCACACGC
Downstream 100 bases:
>100_bases ACAGTCATGTCATGAGTGCGCCGGCGAGCGTGCCTGCGCGCAAATCCTCATTCGTCGAACGCTACGGTGCGGTGTTTGGC CGTGAGCAAGGCCTTATGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MIASTQAAVRQWFPRLAGGYVYPAGLYTKKLISVAWLLMTELEAYLEDLEGAADEPLVVDALRIKLAELMVDIDCRLAGA DTPNELHQFALFSEYGLTDVIAHTGPVAVEWLGVAADSAAGHDHEAERLIELFKELLEAFPGKLFNPLLPGTQGQVLRTL RDWDRSCRLAGGDAAFLAPLMRSL
Sequences:
>Translated_184_residues MIASTQAAVRQWFPRLAGGYVYPAGLYTKKLISVAWLLMTELEAYLEDLEGAADEPLVVDALRIKLAELMVDIDCRLAGA DTPNELHQFALFSEYGLTDVIAHTGPVAVEWLGVAADSAAGHDHEAERLIELFKELLEAFPGKLFNPLLPGTQGQVLRTL RDWDRSCRLAGGDAAFLAPLMRSL >Mature_184_residues MIASTQAAVRQWFPRLAGGYVYPAGLYTKKLISVAWLLMTELEAYLEDLEGAADEPLVVDALRIKLAELMVDIDCRLAGA DTPNELHQFALFSEYGLTDVIAHTGPVAVEWLGVAADSAAGHDHEAERLIELFKELLEAFPGKLFNPLLPGTQGQVLRTL RDWDRSCRLAGGDAAFLAPLMRSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20165; Mature: 20165
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIASTQAAVRQWFPRLAGGYVYPAGLYTKKLISVAWLLMTELEAYLEDLEGAADEPLVVD CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH ALRIKLAELMVDIDCRLAGADTPNELHQFALFSEYGLTDVIAHTGPVAVEWLGVAADSAA HHHHHHHHHHHHHHCEECCCCCHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHCCCCC GHDHEAERLIELFKELLEAFPGKLFNPLLPGTQGQVLRTLRDWDRSCRLAGGDAAFLAPL CCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHH MRSL HHHC >Mature Secondary Structure MIASTQAAVRQWFPRLAGGYVYPAGLYTKKLISVAWLLMTELEAYLEDLEGAADEPLVVD CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH ALRIKLAELMVDIDCRLAGADTPNELHQFALFSEYGLTDVIAHTGPVAVEWLGVAADSAA HHHHHHHHHHHHHHCEECCCCCHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHCCCCC GHDHEAERLIELFKELLEAFPGKLFNPLLPGTQGQVLRTLRDWDRSCRLAGGDAAFLAPL CCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHH MRSL HHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA