Click here to switch to the map view.

The map label for this gene is rimK [H]

Identifier: 66045762

GI number: 66045762

Start: 2936598

End: 2938184

Strand: Reverse

Name: rimK [H]

Synonym: Psyr_2526

Alternate gene names: 66045762

Gene position: 2938184-2936598 (Counterclockwise)

Preceding gene: 66045765

Following gene: 66045761

Centisome position: 48.22

GC content: 58.1

Gene sequence:

>1587_bases
ATGTCAGCGGCACAGGTGAAGATGAACGAAGTATCTGCGCAACTTGCGCTTTCAGCAACAACCCGACGTGCAGACCCCAC
AACACTCTTTGCAGCGCAGAGGCAACTGGTGATTATTGTCGAACGGCTCGAAGACTGGGCATCGTACTTCCCCAGCGAAG
ACTTGATCAGCGCCCAGGACTATCTGGAAAAACCGCTGAAAGCCACGGCAGGCAGGCGTGTGCAAGTCATCAACCTGTGC
CGCAGCTACAAATACCTGGGCCACGGTTATTACTGTTCCCTGCTCGCCGAAGCGCGCCAGCACAATGTCATTCCCTCGGT
AAAGACCATCAGCGAGTTGACCCGCAAGTCACTCTACGGCCTGGCCCTCGATGACCTCGACAAGTTGCTGGAGACCGCAC
TTGAGGATCATCCCTATGACGACACCGAAGGCTTTACCCTGACACTGTATTTCGGCCAGACGACACTTGAGCCGTTGAAG
GATCTTGCCCGTCAGTTGTTTGAAGTCTTCCCCTGCCCGATCCTGATGGTGGAGTTTCGCAAGCGCGACAATTGGCATAT
TGCCGGTATCAAGGCCGGTGCTCTGCCGCGTCTGCGCGAGGATCAGCAGGATGAGTTCGCCACGGCGCTGGAAGGCTTCA
GCCGCAACGTCTGGCGCCAGCCCAGTTCGCGGCGCATGGCCCGCTACGACCTGGCGATTCTGCATGACCCGCAGGAACAA
CTGCCGCCTTCCAACCCTGAGGCGCTGGCCAATTTCATCCGCGTCGGTCAGCGCCTGGGCATCGATGTCGAACTGATCGA
AAAGAAAGACTACGCCCGGCTGGCCGAGTACGACGCGCTGCTGATTCGCGAAACCACCAGCGTCGACAACCACACCTATC
GCTTTGCCAAGAAAGCCGAAAGCGAGGGGCTGGTGGTCATGGATGACTCCACCTCGATCCTGCGCTGCACCAACAAGGTG
TATTTGACCGACCTGCTCAAAAGCCACGATCTGGGCATGCCGCGAACGGAAATTCTCTACAAGGACCGCCCGGAAGAACT
GCAGCACGTGGCCACACGCCTGGGCTTCCCGCTGGTATTGAAGATCCCTGACGGCTGCTTTTCCAGAGGTGTGATCAAGG
TCAGTACACCCGAGGAAATGCACACGGCGACGACGCAGTTGTTCGAGCACTCGGTATTGCTGCTGGCTCAGGAGTTTTTC
TACACCGAGTACGACTGGCGGATCGGCATTCTCAATCGCAAACCGATATTCGCCTGCCAGTACTTCATGTCCAAGGGGCA
TTGGCAGATCTACAACCACAAGGCGATCGGCGCCGAGGTGATTGGCGAATGCCGCACGCTGGCGGTGCACGAAGCGCCGC
GCGCCGTGGTCGAACTGGCGCTCAAGACCGCCAACCTGATCGGTGACGGATTGTATGGCGTGGACTTGAAGCAGTCAGGC
GATCAAGTGGTGGTGATCGAGGTCAACGACAACCCGAACCTGGATGCCGGCATCGAAGACGCTTATCTGCAGGATGATCT
GTACAGCCTGGTGCTGGAAGAGTTCGTCCGCCGTCTGGAGCTCAAGCGCCTCGGTCAGGCATGGTGA

Upstream 100 bases:

>100_bases
AGTCCATCTGCACCGCCGTAAAAGTTGTGTAACGAAACGGGACATTTCAAAAAGCACATGCTTAATAGAAAGGACTTGTT
TCCCATCGGATCGATTACAC

Downstream 100 bases:

>100_bases
AACGATGATTCAGGGCCTGAAACTCGACAACAACCAGTTGCTGGCATGTGATCCGCAAAAGGCCCAGGTGCTGTGGTTCA
GCAAACCGGATGCCGGAGAA

Product: glutathione synthase/ribosomal protein S6 modification glutaminyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 528; Mature: 527

Protein sequence:

>528_residues
MSAAQVKMNEVSAQLALSATTRRADPTTLFAAQRQLVIIVERLEDWASYFPSEDLISAQDYLEKPLKATAGRRVQVINLC
RSYKYLGHGYYCSLLAEARQHNVIPSVKTISELTRKSLYGLALDDLDKLLETALEDHPYDDTEGFTLTLYFGQTTLEPLK
DLARQLFEVFPCPILMVEFRKRDNWHIAGIKAGALPRLREDQQDEFATALEGFSRNVWRQPSSRRMARYDLAILHDPQEQ
LPPSNPEALANFIRVGQRLGIDVELIEKKDYARLAEYDALLIRETTSVDNHTYRFAKKAESEGLVVMDDSTSILRCTNKV
YLTDLLKSHDLGMPRTEILYKDRPEELQHVATRLGFPLVLKIPDGCFSRGVIKVSTPEEMHTATTQLFEHSVLLLAQEFF
YTEYDWRIGILNRKPIFACQYFMSKGHWQIYNHKAIGAEVIGECRTLAVHEAPRAVVELALKTANLIGDGLYGVDLKQSG
DQVVVIEVNDNPNLDAGIEDAYLQDDLYSLVLEEFVRRLELKRLGQAW

Sequences:

>Translated_528_residues
MSAAQVKMNEVSAQLALSATTRRADPTTLFAAQRQLVIIVERLEDWASYFPSEDLISAQDYLEKPLKATAGRRVQVINLC
RSYKYLGHGYYCSLLAEARQHNVIPSVKTISELTRKSLYGLALDDLDKLLETALEDHPYDDTEGFTLTLYFGQTTLEPLK
DLARQLFEVFPCPILMVEFRKRDNWHIAGIKAGALPRLREDQQDEFATALEGFSRNVWRQPSSRRMARYDLAILHDPQEQ
LPPSNPEALANFIRVGQRLGIDVELIEKKDYARLAEYDALLIRETTSVDNHTYRFAKKAESEGLVVMDDSTSILRCTNKV
YLTDLLKSHDLGMPRTEILYKDRPEELQHVATRLGFPLVLKIPDGCFSRGVIKVSTPEEMHTATTQLFEHSVLLLAQEFF
YTEYDWRIGILNRKPIFACQYFMSKGHWQIYNHKAIGAEVIGECRTLAVHEAPRAVVELALKTANLIGDGLYGVDLKQSG
DQVVVIEVNDNPNLDAGIEDAYLQDDLYSLVLEEFVRRLELKRLGQAW
>Mature_527_residues
SAAQVKMNEVSAQLALSATTRRADPTTLFAAQRQLVIIVERLEDWASYFPSEDLISAQDYLEKPLKATAGRRVQVINLCR
SYKYLGHGYYCSLLAEARQHNVIPSVKTISELTRKSLYGLALDDLDKLLETALEDHPYDDTEGFTLTLYFGQTTLEPLKD
LARQLFEVFPCPILMVEFRKRDNWHIAGIKAGALPRLREDQQDEFATALEGFSRNVWRQPSSRRMARYDLAILHDPQEQL
PPSNPEALANFIRVGQRLGIDVELIEKKDYARLAEYDALLIRETTSVDNHTYRFAKKAESEGLVVMDDSTSILRCTNKVY
LTDLLKSHDLGMPRTEILYKDRPEELQHVATRLGFPLVLKIPDGCFSRGVIKVSTPEEMHTATTQLFEHSVLLLAQEFFY
TEYDWRIGILNRKPIFACQYFMSKGHWQIYNHKAIGAEVIGECRTLAVHEAPRAVVELALKTANLIGDGLYGVDLKQSGD
QVVVIEVNDNPNLDAGIEDAYLQDDLYSLVLEEFVRRLELKRLGQAW

Specific function: Responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6 [H]

COG id: COG0189

COG function: function code HJ; Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-grasp domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011761
- InterPro:   IPR013651
- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR004666 [H]

Pfam domain/function: PF08443 RimK [H]

EC number: NA

Molecular weight: Translated: 60161; Mature: 60030

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAAQVKMNEVSAQLALSATTRRADPTTLFAAQRQLVIIVERLEDWASYFPSEDLISAQD
CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHH
YLEKPLKATAGRRVQVINLCRSYKYLGHGYYCSLLAEARQHNVIPSVKTISELTRKSLYG
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC
LALDDLDKLLETALEDHPYDDTEGFTLTLYFGQTTLEPLKDLARQLFEVFPCPILMVEFR
CCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEHH
KRDNWHIAGIKAGALPRLREDQQDEFATALEGFSRNVWRQPSSRRMARYDLAILHDPQEQ
CCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCEEEEECCHHH
LPPSNPEALANFIRVGQRLGIDVELIEKKDYARLAEYDALLIRETTSVDNHTYRFAKKAE
CCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCEEEEEECCCCCCCHHHHHHHCC
SEGLVVMDDSTSILRCTNKVYLTDLLKSHDLGMPRTEILYKDRPEELQHVATRLGFPLVL
CCCEEEECCCCCEEHHCCHHHHHHHHHHCCCCCCHHHHEECCCHHHHHHHHHHCCCCEEE
KIPDGCFSRGVIKVSTPEEMHTATTQLFEHSVLLLAQEFFYTEYDWRIGILNRKPIFACQ
ECCCCCHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEECCCCHHHHH
YFMSKGHWQIYNHKAIGAEVIGECRTLAVHEAPRAVVELALKTANLIGDGLYGVDLKQSG
HHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCC
DQVVVIEVNDNPNLDAGIEDAYLQDDLYSLVLEEFVRRLELKRLGQAW
CEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SAAQVKMNEVSAQLALSATTRRADPTTLFAAQRQLVIIVERLEDWASYFPSEDLISAQD
CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHH
YLEKPLKATAGRRVQVINLCRSYKYLGHGYYCSLLAEARQHNVIPSVKTISELTRKSLYG
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC
LALDDLDKLLETALEDHPYDDTEGFTLTLYFGQTTLEPLKDLARQLFEVFPCPILMVEFR
CCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEHH
KRDNWHIAGIKAGALPRLREDQQDEFATALEGFSRNVWRQPSSRRMARYDLAILHDPQEQ
CCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCEEEEECCHHH
LPPSNPEALANFIRVGQRLGIDVELIEKKDYARLAEYDALLIRETTSVDNHTYRFAKKAE
CCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCEEEEEECCCCCCCHHHHHHHCC
SEGLVVMDDSTSILRCTNKVYLTDLLKSHDLGMPRTEILYKDRPEELQHVATRLGFPLVL
CCCEEEECCCCCEEHHCCHHHHHHHHHHCCCCCCHHHHEECCCHHHHHHHHHHCCCCEEE
KIPDGCFSRGVIKVSTPEEMHTATTQLFEHSVLLLAQEFFYTEYDWRIGILNRKPIFACQ
ECCCCCHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEECCCCHHHHH
YFMSKGHWQIYNHKAIGAEVIGECRTLAVHEAPRAVVELALKTANLIGDGLYGVDLKQSG
HHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCC
DQVVVIEVNDNPNLDAGIEDAYLQDDLYSLVLEEFVRRLELKRLGQAW
CEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Glu; Ribosomal protein S6 [C]

Specific reaction: Catalyzes the addition of glutamic acids to the carboxyl end of ribosomal protein S6 [C]

General reaction: Ligases; Forming Carbon-Nitrogen Bonds; Acid-D-Amino-Acid Ligases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA