| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045754
Identifier: 66045754
GI number: 66045754
Start: 2927079
End: 2927765
Strand: Direct
Name: 66045754
Synonym: Psyr_2518
Alternate gene names: NA
Gene position: 2927079-2927765 (Clockwise)
Preceding gene: 66045749
Following gene: 66045756
Centisome position: 48.03
GC content: 57.35
Gene sequence:
>687_bases ATGAATATGCCGAAAATGTCTTCCATCAACCGACTTCAGCGCCGCCTCGCGTGGTGTTTCTTCCCCTCCGTGCTGGTGGC TTCTGCCCTGGTCCTGTTCACCATGGGCAAAGGCGTGCATGCAGAGCCCAAGAATGGTGTCCAGACACTGGTATTTCTGC GTCATGCCGAAAAGCCGGCCATGGGGCTGGGGCAATTGAACTGCCAGGGACTCAACCGGGCGATAGAGCTGTCGGAAGTC CTGCCCAGGGAATTCGGCAAGGCTGACTTCATCTTCGCCGCCAATCCGAGCCGACATGTGGAAGAGGGTGAGGGCGACCA GTCCTACAGCTACGTTCGTCCGCTGATGACGGTAGGGCCCAGCGCAATCAAACTGGGGTTGCCCGTCAACCTTGACTTCG GTGCCAACGACACCGCAGACCTGGCCGATGAACTGATGCAGGACAAGTACCACAACGCAGTCATCTACACCGCCTGGTCG CATGGCTATCTGCCGGAGCTGATCAACAAGGTGGCTGAAGAAGCGTCCGGCAAGAGCACCAATCTGCTGGATGACTGGAC AAACGATGATTTCGACTCGGTGATTGTCGTCACCCTGAAATGGGTCGATGGCAAAGCGACGCTCGATTACAAGAATCAAA AGCAGGGCCTCAACAACGGCGCCGAGACCTGCCCTGAAGCGACCTGA
Upstream 100 bases:
>100_bases ACTGATCCGCAGAAATTTCCAGGGCGAGCTGCACAAGCCTGCGTATTCGCACCAGCCAAGTGGCTGCCCCCTTTCAAATG CGCACCGGACTCAGAAAATA
Downstream 100 bases:
>100_bases TGCCCAAGCGCAACGGTTTTCAGCCGTTGAGAGACTTCATCGACGCCGCGTTATAGCGCTCACCGGATGCCGACCCCTGG GCCGGGAAAATCGCCTCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MNMPKMSSINRLQRRLAWCFFPSVLVASALVLFTMGKGVHAEPKNGVQTLVFLRHAEKPAMGLGQLNCQGLNRAIELSEV LPREFGKADFIFAANPSRHVEEGEGDQSYSYVRPLMTVGPSAIKLGLPVNLDFGANDTADLADELMQDKYHNAVIYTAWS HGYLPELINKVAEEASGKSTNLLDDWTNDDFDSVIVVTLKWVDGKATLDYKNQKQGLNNGAETCPEAT
Sequences:
>Translated_228_residues MNMPKMSSINRLQRRLAWCFFPSVLVASALVLFTMGKGVHAEPKNGVQTLVFLRHAEKPAMGLGQLNCQGLNRAIELSEV LPREFGKADFIFAANPSRHVEEGEGDQSYSYVRPLMTVGPSAIKLGLPVNLDFGANDTADLADELMQDKYHNAVIYTAWS HGYLPELINKVAEEASGKSTNLLDDWTNDDFDSVIVVTLKWVDGKATLDYKNQKQGLNNGAETCPEAT >Mature_228_residues MNMPKMSSINRLQRRLAWCFFPSVLVASALVLFTMGKGVHAEPKNGVQTLVFLRHAEKPAMGLGQLNCQGLNRAIELSEV LPREFGKADFIFAANPSRHVEEGEGDQSYSYVRPLMTVGPSAIKLGLPVNLDFGANDTADLADELMQDKYHNAVIYTAWS HGYLPELINKVAEEASGKSTNLLDDWTNDDFDSVIVVTLKWVDGKATLDYKNQKQGLNNGAETCPEAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25133; Mature: 25133
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMPKMSSINRLQRRLAWCFFPSVLVASALVLFTMGKGVHAEPKNGVQTLVFLRHAEKPA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCC MGLGQLNCQGLNRAIELSEVLPREFGKADFIFAANPSRHVEEGEGDQSYSYVRPLMTVGP CCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCC SAIKLGLPVNLDFGANDTADLADELMQDKYHNAVIYTAWSHGYLPELINKVAEEASGKST CCEEECCCEEECCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCCCC NLLDDWTNDDFDSVIVVTLKWVDGKATLDYKNQKQGLNNGAETCPEAT CCCCCCCCCCCCCEEEEEEEEECCCEEECCCHHHHCCCCCCCCCCCCC >Mature Secondary Structure MNMPKMSSINRLQRRLAWCFFPSVLVASALVLFTMGKGVHAEPKNGVQTLVFLRHAEKPA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCC MGLGQLNCQGLNRAIELSEVLPREFGKADFIFAANPSRHVEEGEGDQSYSYVRPLMTVGP CCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCC SAIKLGLPVNLDFGANDTADLADELMQDKYHNAVIYTAWSHGYLPELINKVAEEASGKST CCEEECCCEEECCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCCCC NLLDDWTNDDFDSVIVVTLKWVDGKATLDYKNQKQGLNNGAETCPEAT CCCCCCCCCCCCCEEEEEEEEECCCEEECCCHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA