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The map label for this gene is 66045745

Identifier: 66045745

GI number: 66045745

Start: 2917357

End: 2918562

Strand: Direct

Name: 66045745

Synonym: Psyr_2509

Alternate gene names: NA

Gene position: 2917357-2918562 (Clockwise)

Preceding gene: 66045744

Following gene: 66045746

Centisome position: 47.87

GC content: 61.69

Gene sequence:

>1206_bases
ATGAGCACCGCCGTAATGGACAAGGGTACTGCGCAGCCGGGTGACAGCCTGGTCAGTGATGTCAGCCTGCCCGCACTGGT
GATTCACAATCAGGCACTGCAACACAATATTCGCTGGATGCAGCAGTTTGTCAGCGACAGCGGTGCAGAGCTGGCACCGC
ACGGCAAGACCAGCATGGTGCCCGCGCTGTTTCGCCGGCAACTGGACGCGGGCGCATGGGGCATGACCCTCGCCACCGCA
GTCCAGACGCAGGCCGCTTACGCGCATGGCGTGCGCCGGGTGCTGATGGCCAACCAGTTGGTCGGTGCGCCGAACATGGC
AATCGTTGCCGACATGCTGGCTGATCCGATGTTCGAGTTTCATTGCATGGTCGACCATCCCGATAATGTCGCTGCGTTGG
GCGAGTTTTTCGCTGCGCGTGGCCTGCGTTTGAACGTGATGATCGAATACGGCGTACCCGGCGGGCGTTGCGGCTGCCGT
AGTGAAGAACAGGTGCTGGCGCTGGCCGACGCTGTTCTGGCACAACCGGCGCTGGCATTGACCGGCATTGAAGGGTACGA
GGGCGTCATCCACGGCGACCACGCTATCGAAGGCATCAAGGCCTTTGCCGCGTCACTGGTGCGTCTGGCTGTCGACCTGC
AGGACAAGGGCGCCTTCGCACTGGATCGCCCGATCGTCACGGCGTCCGGATCGGCCTGGTATGACCTGATCGCCGAAGCA
TTCGACGCTCAGGCGGTTCGCGAGCGCTTCCTCAGCGTGCTGCGGCCGGGCAGCTATGTGGTGCATGACCACGGCATCTA
CAAGGACGCGCAGTGCTGCGTGCTGGATCGGCGTGCCGAATTGAGCGAAGCGTTGCTGCCTGCCCTGGAAGTCTGGGCGC
ATGTGCAATCCATGCCGGAACCGGGCTTTGCAGTGATTGCCATGGGCAAGCGCGATGTAGCCTACGACGCCGGGTTGCCC
AATCCGCTGCTGCGTTACAAGCCAGGCGTGCAATCGACTGCCGGTGACGATGTCAGCGCCTGCAAGGTGACGGCTGTCAT
GGACCAGCACGCATTCATGAGCGTTGCACCCGGGTGCGAGTTGAAGGTCGGCGATATCATTTCCTTCGGCACCTCGCACC
CGTGTCTGACGTTCGACAAGTGGCGTTCAGGTTGCCTGGTGGATAATGACCTGCGGGTGATAGAACCTTTCAGTACGTAT
TTCTAG

Upstream 100 bases:

>100_bases
GCCGACGCCAAGACCCACTACGACGACTATCGGCGGGTGCTGATCGACAGTGCCAATGGCCTGGCTCGCCGTATCAATGA
ATAACCGCAGGAGATTACCG

Downstream 100 bases:

>100_bases
ATAAGTATTTGCAGGAGTATCGTCACATGAGCCTTCCACGGGTCGCCCTGATCGGCGAATGCATGATCGAACTGCAACAG
CATGCTGATGGCAGCCTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 400

Protein sequence:

>401_residues
MSTAVMDKGTAQPGDSLVSDVSLPALVIHNQALQHNIRWMQQFVSDSGAELAPHGKTSMVPALFRRQLDAGAWGMTLATA
VQTQAAYAHGVRRVLMANQLVGAPNMAIVADMLADPMFEFHCMVDHPDNVAALGEFFAARGLRLNVMIEYGVPGGRCGCR
SEEQVLALADAVLAQPALALTGIEGYEGVIHGDHAIEGIKAFAASLVRLAVDLQDKGAFALDRPIVTASGSAWYDLIAEA
FDAQAVRERFLSVLRPGSYVVHDHGIYKDAQCCVLDRRAELSEALLPALEVWAHVQSMPEPGFAVIAMGKRDVAYDAGLP
NPLLRYKPGVQSTAGDDVSACKVTAVMDQHAFMSVAPGCELKVGDIISFGTSHPCLTFDKWRSGCLVDNDLRVIEPFSTY
F

Sequences:

>Translated_401_residues
MSTAVMDKGTAQPGDSLVSDVSLPALVIHNQALQHNIRWMQQFVSDSGAELAPHGKTSMVPALFRRQLDAGAWGMTLATA
VQTQAAYAHGVRRVLMANQLVGAPNMAIVADMLADPMFEFHCMVDHPDNVAALGEFFAARGLRLNVMIEYGVPGGRCGCR
SEEQVLALADAVLAQPALALTGIEGYEGVIHGDHAIEGIKAFAASLVRLAVDLQDKGAFALDRPIVTASGSAWYDLIAEA
FDAQAVRERFLSVLRPGSYVVHDHGIYKDAQCCVLDRRAELSEALLPALEVWAHVQSMPEPGFAVIAMGKRDVAYDAGLP
NPLLRYKPGVQSTAGDDVSACKVTAVMDQHAFMSVAPGCELKVGDIISFGTSHPCLTFDKWRSGCLVDNDLRVIEPFSTY
F
>Mature_400_residues
STAVMDKGTAQPGDSLVSDVSLPALVIHNQALQHNIRWMQQFVSDSGAELAPHGKTSMVPALFRRQLDAGAWGMTLATAV
QTQAAYAHGVRRVLMANQLVGAPNMAIVADMLADPMFEFHCMVDHPDNVAALGEFFAARGLRLNVMIEYGVPGGRCGCRS
EEQVLALADAVLAQPALALTGIEGYEGVIHGDHAIEGIKAFAASLVRLAVDLQDKGAFALDRPIVTASGSAWYDLIAEAF
DAQAVRERFLSVLRPGSYVVHDHGIYKDAQCCVLDRRAELSEALLPALEVWAHVQSMPEPGFAVIAMGKRDVAYDAGLPN
PLLRYKPGVQSTAGDDVSACKVTAVMDQHAFMSVAPGCELKVGDIISFGTSHPCLTFDKWRSGCLVDNDLRVIEPFSTYF

Specific function: Catalyzes the reversible cleavage of D-theronine or D- allothreonine into glycine and acetaldehyde. Can also cleave D- beta-phenylserine, D-beta-hydroxy-alpha-aminovaleric acid, D-beta- 3,4-dihydroxyphenylserine and D-beta-3,4- methylenedioxyphenylserine

COG id: COG3616

COG function: function code E; Predicted amino acid aldolase or racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DSD1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001608 [H]

Pfam domain/function: PF01168 Ala_racemase_N [H]

EC number: =4.1.2.42 [H]

Molecular weight: Translated: 43109; Mature: 42978

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTAVMDKGTAQPGDSLVSDVSLPALVIHNQALQHNIRWMQQFVSDSGAELAPHGKTSMV
CCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
PALFRRQLDAGAWGMTLATAVQTQAAYAHGVRRVLMANQLVGAPNMAIVADMLADPMFEF
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEE
HCMVDHPDNVAALGEFFAARGLRLNVMIEYGVPGGRCGCRSEEQVLALADAVLAQPALAL
EEEECCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCHHEE
TGIEGYEGVIHGDHAIEGIKAFAASLVRLAVDLQDKGAFALDRPIVTASGSAWYDLIAEA
ECCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEECCCHHHHHHHHH
FDAQAVRERFLSVLRPGSYVVHDHGIYKDAQCCVLDRRAELSEALLPALEVWAHVQSMPE
HHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHCCC
PGFAVIAMGKRDVAYDAGLPNPLLRYKPGVQSTAGDDVSACKVTAVMDQHAFMSVAPGCE
CCEEEEEECCCCCEECCCCCCCHHHCCCCCCCCCCCCCHHHEEEHHHHHHHHHEECCCCC
LKVGDIISFGTSHPCLTFDKWRSGCLVDNDLRVIEPFSTYF
EEECCEEECCCCCCCEEHHHHCCCCEECCCCEEECCHHHCC
>Mature Secondary Structure 
STAVMDKGTAQPGDSLVSDVSLPALVIHNQALQHNIRWMQQFVSDSGAELAPHGKTSMV
CCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
PALFRRQLDAGAWGMTLATAVQTQAAYAHGVRRVLMANQLVGAPNMAIVADMLADPMFEF
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEE
HCMVDHPDNVAALGEFFAARGLRLNVMIEYGVPGGRCGCRSEEQVLALADAVLAQPALAL
EEEECCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCHHEE
TGIEGYEGVIHGDHAIEGIKAFAASLVRLAVDLQDKGAFALDRPIVTASGSAWYDLIAEA
ECCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEECCCHHHHHHHHH
FDAQAVRERFLSVLRPGSYVVHDHGIYKDAQCCVLDRRAELSEALLPALEVWAHVQSMPE
HHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHCCC
PGFAVIAMGKRDVAYDAGLPNPLLRYKPGVQSTAGDDVSACKVTAVMDQHAFMSVAPGCE
CCEEEEEECCCCCEECCCCCCCHHHCCCCCCCCCCCCCHHHEEEHHHHHHHHHEECCCCC
LKVGDIISFGTSHPCLTFDKWRSGCLVDNDLRVIEPFSTYF
EEECCEEECCCCCCCEEHHHHCCCCEECCCCEEECCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9642221 [H]