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The map label for this gene is ybiT [H]

Identifier: 66045731

GI number: 66045731

Start: 2905473

End: 2907062

Strand: Reverse

Name: ybiT [H]

Synonym: Psyr_2495

Alternate gene names: 66045731

Gene position: 2907062-2905473 (Counterclockwise)

Preceding gene: 66045732

Following gene: 66045729

Centisome position: 47.71

GC content: 58.93

Gene sequence:

>1590_bases
TTGATCTCCACAGCTAACATCACGATGCAGTTCGGCCCCAAACCTTTGTTCGAGAATGTCTCGGTCAAGTTTGGCGCTGG
TAACCGTTACGGCCTGATTGGCGCGAACGGCTGCGGCAAGTCCACGTTCATGAAAATCCTCGGTGGCGACCTCGAGCCTT
CGGGTGGGCAGGTGATGCTGGAGCCGAACGTGCGTCTGGGTAAACTGCGCCAGGATCAGTTCGCCTATGAAGAGTTCACG
GTGCTCGACACCGTGATCATGGGTCACGAAGAGCTGTGGAAGGTCAAGGCCGAGCGCGACCGCATCTATTCGCTGCCGGA
AATGAGTGAAGACGACGGCATGGCCGTTGCCGAGCTGGAAACCGAGTTTGCCGAAATGGACGGCTACACTGCCGAATCCC
GCGCCGGTGAATTGCTGTTGGGTCTGGGTATCGGCATCGAACAGCACAACGGCCCGATGAGCGAAGTCTCGCCGGGCTGG
AAGCTGCGCGTTCTGCTGGCGCAGGCACTGTTCTCTGATCCGGAAGTGCTGCTGCTCGACGAACCGACCAACCACCTGGA
CATCAACACCATTCGCTGGCTGGAAAACATCCTGACCCAGCGTAACAGCCTGATGATCATCATCTCCCACGACCGTCACT
TCCTGAACAGCGTGTGCACGCACATGGCCGACCTGGATTACGGCGAGTTGTGCCTGTTCCCGGGCAACTATGACGAGTAC
ATGACCGTGGCGACCCAGTCCCGCGAGCAGCTGCTGTCCGACAACGCCAAGAAGAAAGCCCAGATTTCCGAACTGCAATC
GTTCGTCAGCCGCTTCTCGGCCAACGCCTCGAAAGCCAAGCAGGCCACCTCCCGAGCCAAGGCGATCGACAAGATCCAGC
TGGCCGAGGTCAAGCCATCCAGCCGTGTCAGCCCGTTCATTCGTTTCGAGCAGACCAAAAAGCTGCACCGTCAGGCGGTC
ATCGTCGATCGCATGGCCAAAGGCTTCGACGGCAAGACCCTGTTCAAGGACTTCAGCTTCCAGGTCGAAGCCGGCGAGCG
TGTGGCCATCATCGGCCCGAACGGCATCGGCAAGACCACCCTGCTGCGCACCCTGGTCAACGAGTTGCAGGCGGATGCCG
GCACGGTCAAGTGGACCGACGCAGCGGAAATCGGCTATTACGCTCAGGACCATGCTCACGATTTCGAGGATGACTCCACC
CTGTTCGACTGGATGGGTCAGTGGACCCAGGGCGGCGAGCAACTGGTACGTGGCACTCTGGGCCGCATGCTGTTCTCCAA
CGACGAGATCCTCAAATCGGTGAAGGTAATTTCCGGTGGTGAACAGGGCCGCATGCTGTTCGGCAAGCTGATCCTGCAAA
AGCCCAACGTGCTGGTGATGGACGAACCGACCAACCACCTGGACATGGAATCCATCGAGTCGCTGAACCTGGCGCTGGAA
AACTATCCAGGCACACTGATTTTCGTCAGTCACGACCGCGAGTTCGTGTCCTCGCTGGCAACCCGCATCATCGAACTCAG
CCCAAGTGGCGTGGTCGATTTCAGCGGCACCTATGACGACTACCTGCGTAGCCAGGGCGTTACGTTCTAA

Upstream 100 bases:

>100_bases
GACGGAGCGGACTGAACAGCTTCGGTGGGGTCCTGAACACCACACCTGCTGACGCCAGCGCTCCCCCGGTTATTGCCCAA
GTTATTGATAGGTAAAGTAA

Downstream 100 bases:

>100_bases
GCCTGTCAGCCCGCAATAGTAAAAAGCCCTGTCTTGTGACAGGGCTTTTTAGTTTCAGAGCGCTTATTCGCTCGGCTGGC
TGAGCATTTCAATCCACAGC

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 529; Mature: 529

Protein sequence:

>529_residues
MISTANITMQFGPKPLFENVSVKFGAGNRYGLIGANGCGKSTFMKILGGDLEPSGGQVMLEPNVRLGKLRQDQFAYEEFT
VLDTVIMGHEELWKVKAERDRIYSLPEMSEDDGMAVAELETEFAEMDGYTAESRAGELLLGLGIGIEQHNGPMSEVSPGW
KLRVLLAQALFSDPEVLLLDEPTNHLDINTIRWLENILTQRNSLMIIISHDRHFLNSVCTHMADLDYGELCLFPGNYDEY
MTVATQSREQLLSDNAKKKAQISELQSFVSRFSANASKAKQATSRAKAIDKIQLAEVKPSSRVSPFIRFEQTKKLHRQAV
IVDRMAKGFDGKTLFKDFSFQVEAGERVAIIGPNGIGKTTLLRTLVNELQADAGTVKWTDAAEIGYYAQDHAHDFEDDST
LFDWMGQWTQGGEQLVRGTLGRMLFSNDEILKSVKVISGGEQGRMLFGKLILQKPNVLVMDEPTNHLDMESIESLNLALE
NYPGTLIFVSHDREFVSSLATRIIELSPSGVVDFSGTYDDYLRSQGVTF

Sequences:

>Translated_529_residues
MISTANITMQFGPKPLFENVSVKFGAGNRYGLIGANGCGKSTFMKILGGDLEPSGGQVMLEPNVRLGKLRQDQFAYEEFT
VLDTVIMGHEELWKVKAERDRIYSLPEMSEDDGMAVAELETEFAEMDGYTAESRAGELLLGLGIGIEQHNGPMSEVSPGW
KLRVLLAQALFSDPEVLLLDEPTNHLDINTIRWLENILTQRNSLMIIISHDRHFLNSVCTHMADLDYGELCLFPGNYDEY
MTVATQSREQLLSDNAKKKAQISELQSFVSRFSANASKAKQATSRAKAIDKIQLAEVKPSSRVSPFIRFEQTKKLHRQAV
IVDRMAKGFDGKTLFKDFSFQVEAGERVAIIGPNGIGKTTLLRTLVNELQADAGTVKWTDAAEIGYYAQDHAHDFEDDST
LFDWMGQWTQGGEQLVRGTLGRMLFSNDEILKSVKVISGGEQGRMLFGKLILQKPNVLVMDEPTNHLDMESIESLNLALE
NYPGTLIFVSHDREFVSSLATRIIELSPSGVVDFSGTYDDYLRSQGVTF
>Mature_529_residues
MISTANITMQFGPKPLFENVSVKFGAGNRYGLIGANGCGKSTFMKILGGDLEPSGGQVMLEPNVRLGKLRQDQFAYEEFT
VLDTVIMGHEELWKVKAERDRIYSLPEMSEDDGMAVAELETEFAEMDGYTAESRAGELLLGLGIGIEQHNGPMSEVSPGW
KLRVLLAQALFSDPEVLLLDEPTNHLDINTIRWLENILTQRNSLMIIISHDRHFLNSVCTHMADLDYGELCLFPGNYDEY
MTVATQSREQLLSDNAKKKAQISELQSFVSRFSANASKAKQATSRAKAIDKIQLAEVKPSSRVSPFIRFEQTKKLHRQAV
IVDRMAKGFDGKTLFKDFSFQVEAGERVAIIGPNGIGKTTLLRTLVNELQADAGTVKWTDAAEIGYYAQDHAHDFEDDST
LFDWMGQWTQGGEQLVRGTLGRMLFSNDEILKSVKVISGGEQGRMLFGKLILQKPNVLVMDEPTNHLDMESIESLNLALE
NYPGTLIFVSHDREFVSSLATRIIELSPSGVVDFSGTYDDYLRSQGVTF

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=530, Percent_Identity=30.5660377358491, Blast_Score=259, Evalue=3e-69,
Organism=Homo sapiens, GI10947137, Length=537, Percent_Identity=28.6778398510242, Blast_Score=237, Evalue=2e-62,
Organism=Homo sapiens, GI27881506, Length=537, Percent_Identity=28.6778398510242, Blast_Score=236, Evalue=3e-62,
Organism=Homo sapiens, GI10947135, Length=524, Percent_Identity=30.7251908396947, Blast_Score=230, Evalue=3e-60,
Organism=Homo sapiens, GI69354671, Length=524, Percent_Identity=30.7251908396947, Blast_Score=230, Evalue=3e-60,
Organism=Escherichia coli, GI1787041, Length=529, Percent_Identity=73.5349716446125, Blast_Score=836, Evalue=0.0,
Organism=Escherichia coli, GI1789751, Length=524, Percent_Identity=31.2977099236641, Blast_Score=291, Evalue=7e-80,
Organism=Escherichia coli, GI1787182, Length=533, Percent_Identity=33.0206378986867, Blast_Score=272, Evalue=3e-74,
Organism=Escherichia coli, GI2367384, Length=524, Percent_Identity=30.3435114503817, Blast_Score=226, Evalue=4e-60,
Organism=Escherichia coli, GI1786975, Length=523, Percent_Identity=21.9885277246654, Blast_Score=89, Evalue=6e-19,
Organism=Escherichia coli, GI1786398, Length=239, Percent_Identity=30.1255230125523, Blast_Score=82, Evalue=6e-17,
Organism=Escherichia coli, GI1787029, Length=243, Percent_Identity=26.3374485596708, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI1788165, Length=195, Percent_Identity=25.6410256410256, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1787758, Length=241, Percent_Identity=26.5560165975104, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1789891, Length=224, Percent_Identity=24.5535714285714, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI48994943, Length=245, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI87081782, Length=523, Percent_Identity=24.282982791587, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1788761, Length=234, Percent_Identity=23.9316239316239, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI87081834, Length=204, Percent_Identity=27.4509803921569, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1788450, Length=235, Percent_Identity=24.6808510638298, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1789864, Length=244, Percent_Identity=22.9508196721311, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1786698, Length=198, Percent_Identity=26.2626262626263, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1787500, Length=238, Percent_Identity=25.6302521008403, Blast_Score=63, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17555318, Length=544, Percent_Identity=31.9852941176471, Blast_Score=258, Evalue=6e-69,
Organism=Caenorhabditis elegans, GI17553372, Length=533, Percent_Identity=30.5816135084428, Blast_Score=251, Evalue=7e-67,
Organism=Caenorhabditis elegans, GI17559834, Length=541, Percent_Identity=28.2809611829945, Blast_Score=239, Evalue=4e-63,
Organism=Saccharomyces cerevisiae, GI6320874, Length=534, Percent_Identity=31.6479400749064, Blast_Score=259, Evalue=7e-70,
Organism=Saccharomyces cerevisiae, GI6321121, Length=537, Percent_Identity=30.3538175046555, Blast_Score=250, Evalue=4e-67,
Organism=Saccharomyces cerevisiae, GI6323278, Length=434, Percent_Identity=26.4976958525346, Blast_Score=127, Evalue=3e-30,
Organism=Saccharomyces cerevisiae, GI6324314, Length=434, Percent_Identity=25.3456221198157, Blast_Score=122, Evalue=2e-28,
Organism=Saccharomyces cerevisiae, GI6325030, Length=425, Percent_Identity=24.9411764705882, Blast_Score=117, Evalue=4e-27,
Organism=Drosophila melanogaster, GI24666836, Length=530, Percent_Identity=29.622641509434, Blast_Score=260, Evalue=2e-69,
Organism=Drosophila melanogaster, GI24642252, Length=546, Percent_Identity=30.5860805860806, Blast_Score=258, Evalue=9e-69,
Organism=Drosophila melanogaster, GI18859989, Length=546, Percent_Identity=30.5860805860806, Blast_Score=258, Evalue=9e-69,
Organism=Drosophila melanogaster, GI24641342, Length=541, Percent_Identity=29.3900184842884, Blast_Score=250, Evalue=2e-66,
Organism=Drosophila melanogaster, GI221500365, Length=185, Percent_Identity=27.027027027027, Blast_Score=69, Evalue=9e-12,
Organism=Drosophila melanogaster, GI116007184, Length=185, Percent_Identity=27.027027027027, Blast_Score=69, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 58936; Mature: 58936

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISTANITMQFGPKPLFENVSVKFGAGNRYGLIGANGCGKSTFMKILGGDLEPSGGQVML
CCCEEEEEEEECCCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCEEEE
EPNVRLGKLRQDQFAYEEFTVLDTVIMGHEELWKVKAERDRIYSLPEMSEDDGMAVAELE
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEECCCCCCCCCCEEEEHHH
TEFAEMDGYTAESRAGELLLGLGIGIEQHNGPMSEVSPGWKLRVLLAQALFSDPEVLLLD
HHHHHHCCCCCCCCCCCEEEEECCCEECCCCCHHHCCCCCCHHHHHHHHHHCCCCEEEEE
EPTNHLDINTIRWLENILTQRNSLMIIISHDRHFLNSVCTHMADLDYGELCLFPGNYDEY
CCCCCCCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCEEEECCCCCHH
MTVATQSREQLLSDNAKKKAQISELQSFVSRFSANASKAKQATSRAKAIDKIQLAEVKPS
EEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEEECCCC
SRVSPFIRFEQTKKLHRQAVIVDRMAKGFDGKTLFKDFSFQVEAGERVAIIGPNGIGKTT
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCEEEECCCEEEEECCCCCCHHH
LLRTLVNELQADAGTVKWTDAAEIGYYAQDHAHDFEDDSTLFDWMGQWTQGGEQLVRGTL
HHHHHHHHHHCCCCCEEECCCHHCCCEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHH
GRMLFSNDEILKSVKVISGGEQGRMLFGKLILQKPNVLVMDEPTNHLDMESIESLNLALE
HHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHC
NYPGTLIFVSHDREFVSSLATRIIELSPSGVVDFSGTYDDYLRSQGVTF
CCCCEEEEEECCHHHHHHHHHHHEECCCCCEEECCCCHHHHHHHCCCCC
>Mature Secondary Structure
MISTANITMQFGPKPLFENVSVKFGAGNRYGLIGANGCGKSTFMKILGGDLEPSGGQVML
CCCEEEEEEEECCCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCEEEE
EPNVRLGKLRQDQFAYEEFTVLDTVIMGHEELWKVKAERDRIYSLPEMSEDDGMAVAELE
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEECCCCCCCCCCEEEEHHH
TEFAEMDGYTAESRAGELLLGLGIGIEQHNGPMSEVSPGWKLRVLLAQALFSDPEVLLLD
HHHHHHCCCCCCCCCCCEEEEECCCEECCCCCHHHCCCCCCHHHHHHHHHHCCCCEEEEE
EPTNHLDINTIRWLENILTQRNSLMIIISHDRHFLNSVCTHMADLDYGELCLFPGNYDEY
CCCCCCCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCEEEECCCCCHH
MTVATQSREQLLSDNAKKKAQISELQSFVSRFSANASKAKQATSRAKAIDKIQLAEVKPS
EEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEEECCCC
SRVSPFIRFEQTKKLHRQAVIVDRMAKGFDGKTLFKDFSFQVEAGERVAIIGPNGIGKTT
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCEEEECCCEEEEECCCCCCHHH
LLRTLVNELQADAGTVKWTDAAEIGYYAQDHAHDFEDDSTLFDWMGQWTQGGEQLVRGTL
HHHHHHHHHHCCCCCEEECCCHHCCCEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHH
GRMLFSNDEILKSVKVISGGEQGRMLFGKLILQKPNVLVMDEPTNHLDMESIESLNLALE
HHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHC
NYPGTLIFVSHDREFVSSLATRIIELSPSGVVDFSGTYDDYLRSQGVTF
CCCCEEEEEECCHHHHHHHHHHHEECCCCCEEECCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]