Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

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The map label for this gene is nudH [C]

Identifier: 66045666

GI number: 66045666

Start: 2812267

End: 2812665

Strand: Reverse

Name: nudH [C]

Synonym: Psyr_2430

Alternate gene names: 66045666

Gene position: 2812665-2812267 (Counterclockwise)

Preceding gene: 66045667

Following gene: 66045665

Centisome position: 46.16

GC content: 58.9

Gene sequence:

>399_bases
ATGAAACAACGAGCGACAGTCATCTGCAAACGTGACGGCCAGGTCCTCTACGTGCGCAAACCGAAATCCCGCTGGGCGTT
GCCCGGCGGCAAGATAGAAGCGGGTGAAACGCCCTTCCAGGCCGCAGTGCGTGAACTGTGCGAAGAAACCGGGCTTGCCG
ACCTTGATCTTCTGTACCTCGATGTGTACGAGAAGGATCAGGTCGCCCATTACGTTTTCACCGCCCAGGTCCCAGCCTCC
AGCGAGCCATCGCCGCAGAACGAAATCGCCGCCTGCAAATGGCTTGCGCCGCAGAAACTTGGTGACCTGAAAGCCAGCAG
TGCGACCAAGACCATCGTCCAGTCATATGCCAACGAGTCCGAAGACGTCGCCGGTTCCCGGAGCCACGTCACAGTGTAA

Upstream 100 bases:

>100_bases
TATTACATTTTGGTGACTACCACTGACTATCTTTGAGTCTCAAGTTCACGCAGTCCTTGCAGATACTCATGTCAACGGAC
GTTTAACAGGTGAATGGATT

Downstream 100 bases:

>100_bases
TCGGGACAATAAGGTTGAACGGTATGGCCTGATTCTGTTCTGAGACAGCAGACGGTTCATTACTTTCTTCCCCGTCTCAG
GAGACCCCTATGACTCAGAC

Product: NUDIX hydrolase

Products: NA

Alternate protein names: MutT/Nudix Family Protein; NUDIX Family Hydrolase; NTP Pyrophosphohydrolase; Hydrolaso; MutT/NUDIX Family Hydrolase

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MKQRATVICKRDGQVLYVRKPKSRWALPGGKIEAGETPFQAAVRELCEETGLADLDLLYLDVYEKDQVAHYVFTAQVPAS
SEPSPQNEIAACKWLAPQKLGDLKASSATKTIVQSYANESEDVAGSRSHVTV

Sequences:

>Translated_132_residues
MKQRATVICKRDGQVLYVRKPKSRWALPGGKIEAGETPFQAAVRELCEETGLADLDLLYLDVYEKDQVAHYVFTAQVPAS
SEPSPQNEIAACKWLAPQKLGDLKASSATKTIVQSYANESEDVAGSRSHVTV
>Mature_132_residues
MKQRATVICKRDGQVLYVRKPKSRWALPGGKIEAGETPFQAAVRELCEETGLADLDLLYLDVYEKDQVAHYVFTAQVPAS
SEPSPQNEIAACKWLAPQKLGDLKASSATKTIVQSYANESEDVAGSRSHVTV

Specific function: Preferentially Hydrolyzes Diadenosine Penta-Phosphate With ATP As One Of The Reaction Products. Also Able To Hydrolyze Diadenosine Hexa- And Tetra-Phosphate. Has No Activity On Diadenosine Tri-Phosphate, Adp-Ribose, NADH And Udp-Glucose. In The Meningitis

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.6.1.- [C]

Molecular weight: Translated: 14466; Mature: 14466

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQRATVICKRDGQVLYVRKPKSRWALPGGKIEAGETPFQAAVRELCEETGLADLDLLYL
CCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEE
DVYEKDQVAHYVFTAQVPASSEPSPQNEIAACKWLAPQKLGDLKASSATKTIVQSYANES
EECCCCCEEEEEEEEECCCCCCCCCCCCHHHHHCCCCHHHCCCCCCHHHHHHHHHHCCCC
EDVAGSRSHVTV
CCCCCCCCCCCC
>Mature Secondary Structure
MKQRATVICKRDGQVLYVRKPKSRWALPGGKIEAGETPFQAAVRELCEETGLADLDLLYL
CCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEE
DVYEKDQVAHYVFTAQVPASSEPSPQNEIAACKWLAPQKLGDLKASSATKTIVQSYANES
EECCCCCEEEEEEEEECCCCCCCCCCCCHHHHHCCCCHHHCCCCCCHHHHHHHHHHCCCC
EDVAGSRSHVTV
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA