| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is ygfJ [C]
Identifier: 66045628
GI number: 66045628
Start: 2774106
End: 2774729
Strand: Reverse
Name: ygfJ [C]
Synonym: Psyr_2392
Alternate gene names: 66045628
Gene position: 2774729-2774106 (Counterclockwise)
Preceding gene: 66045630
Following gene: 66045623
Centisome position: 45.53
GC content: 63.14
Gene sequence:
>624_bases TTGAGCAGCATAGACAGCCAGATCCCCGAAGTGTTCGCCCTGGTCCTCGCAGCCGGCCGCAGCAGGCGCTTTGCCGGTGA CAAGCGGCAGGCGCTTCTGCCGTGCGGGCGGACCCTGCTGACGGCAAGCCTGGAAAACGCGCAAAACGCATTCGCCAAAA CGGCGTTGATATTGCGCCCTGATGACCAGGCGGATGCGCTGGGGGTTGCCTCGAACATCACGATCATCCGCAGCGAACAG GCCGAACTGGGGATGGGCCACAGCCTGGCGAGCGCCGTTGCGGCAGTGATGGACTCCTCTGCCGATGCGGTTGCCGTTGT TCTTGCGGACATGCCCTGGATACAGCCGCAGACCCTGCATGACCTGGCCAGAATGGCCGATCCCCAGCGCATCGTCCTGC CAATGCATGAAGGCCAGCGTGGCCATCCGGTGATCATCGGTCGACGATTCTGGCCGGCACTGCTGAAACTGGAAAGCGAT CAGGGCGCGAAGGCCCTGATCACGAATAACCCCGAGGCGTGTGACCTACTGTATTGCGATGACCCTGGCATCCTGCGCGA CGCCGACACCCCTTCAGCGCTGGCAGAAGCCTGCCGGCAACACCTTACACCTCGGCACGACTGA
Upstream 100 bases:
>100_bases GGCAGCGAAATAAGGCATTGTGCGTGCATCGGCAGAACTGCAGGGTACGCCGCGCAAACCGCACGCGCCCTCTCCTTTCA CCCACTCATAAGGTTTCGGA
Downstream 100 bases:
>100_bases CACCGTTGGCCACCCGCAGGATATCGGCCATTACCGCAATGGCGATCTCGGAAGGCGTCTTGCTGCCCAGGTTCAGGCCG ATCGGCGCGTGGATCCGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MSSIDSQIPEVFALVLAAGRSRRFAGDKRQALLPCGRTLLTASLENAQNAFAKTALILRPDDQADALGVASNITIIRSEQ AELGMGHSLASAVAAVMDSSADAVAVVLADMPWIQPQTLHDLARMADPQRIVLPMHEGQRGHPVIIGRRFWPALLKLESD QGAKALITNNPEACDLLYCDDPGILRDADTPSALAEACRQHLTPRHD
Sequences:
>Translated_207_residues MSSIDSQIPEVFALVLAAGRSRRFAGDKRQALLPCGRTLLTASLENAQNAFAKTALILRPDDQADALGVASNITIIRSEQ AELGMGHSLASAVAAVMDSSADAVAVVLADMPWIQPQTLHDLARMADPQRIVLPMHEGQRGHPVIIGRRFWPALLKLESD QGAKALITNNPEACDLLYCDDPGILRDADTPSALAEACRQHLTPRHD >Mature_206_residues SSIDSQIPEVFALVLAAGRSRRFAGDKRQALLPCGRTLLTASLENAQNAFAKTALILRPDDQADALGVASNITIIRSEQA ELGMGHSLASAVAAVMDSSADAVAVVLADMPWIQPQTLHDLARMADPQRIVLPMHEGQRGHPVIIGRRFWPALLKLESDQ GAKALITNNPEACDLLYCDDPGILRDADTPSALAEACRQHLTPRHD
Specific function: Unknown
COG id: COG2068
COG function: function code R; Uncharacterized MobA-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22274; Mature: 22143
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSIDSQIPEVFALVLAAGRSRRFAGDKRQALLPCGRTLLTASLENAQNAFAKTALILRP CCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHEEEEECC DDQADALGVASNITIIRSEQAELGMGHSLASAVAAVMDSSADAVAVVLADMPWIQPQTLH CCCCCHHEHCCCEEEEECCCHHCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHH DLARMADPQRIVLPMHEGQRGHPVIIGRRFWPALLKLESDQGAKALITNNPEACDLLYCD HHHHHCCCCEEEEECCCCCCCCEEEEECHHHHHHEEECCCCCCEEEEECCCCEEEEEEEC DPGILRDADTPSALAEACRQHLTPRHD CCCCCCCCCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure SSIDSQIPEVFALVLAAGRSRRFAGDKRQALLPCGRTLLTASLENAQNAFAKTALILRP CCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHEEEEECC DDQADALGVASNITIIRSEQAELGMGHSLASAVAAVMDSSADAVAVVLADMPWIQPQTLH CCCCCHHEHCCCEEEEECCCHHCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHH DLARMADPQRIVLPMHEGQRGHPVIIGRRFWPALLKLESDQGAKALITNNPEACDLLYCD HHHHHCCCCEEEEECCCCCCCCEEEEECHHHHHHEEECCCCCCEEEEECCCCEEEEEEEC DPGILRDADTPSALAEACRQHLTPRHD CCCCCCCCCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA