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The map label for this gene is ykwD [H]

Identifier: 66045617

GI number: 66045617

Start: 2760278

End: 2761210

Strand: Direct

Name: ykwD [H]

Synonym: Psyr_2381

Alternate gene names: 66045617

Gene position: 2760278-2761210 (Clockwise)

Preceding gene: 66045616

Following gene: 66045618

Centisome position: 45.3

GC content: 62.38

Gene sequence:

>933_bases
ATGAGCGATTTTTCGGGTCTTACTCGGGCTCTGAAATGCATGCCACGCCTTTTCCTCTCCGAGTCCGTTCTCATGCCCGC
ATTGCCCCGTTGTTCCTGGCGCATCTGGTTGTATCTGGTCGCTCTGTTGCCGATCTGCGCGAGTCCTGTCAGTGCTGCCG
AAGAACGACAACTGGTCCAGGCAATCAATGATTTTCGCGGCCAGCCGCAGCGTTGCGAAGCGCGTATGACAAACATCTCC
AGAGCCCTGGCGCTCAATTCCAGCGTGGCACTGCCGATCGGTTTCAGCGGTAATTTACGTGACGCACTCAAGGCAGCCGG
CTATCAGGCGGTCACTGTGCGGACCGTACGACTGGCCGGTGTGCAAAGCGCCGACGCAGCGTTCGACATGCTCAGGAGCC
GCTACTGCGGCGCGTTGCTCGACCCGCAATACGCGGACATCGGCATCACCCGGCAGGGGAGCGACTGGCGTGTGGTGCTG
GCGAAACCGTTGATCGACGAGAGCCTTGAAGACGCGCGCTCGGCTGGACGGGCGCTGCTGGCGCAGGTCAACGCCGCGCG
TGCCAAGCCGCGCATGTGTGGCAAGCGGCCTTTCCCGTCGGCTCGGCCGTTGAGCTGGAATACCACCCTGGAAACGGCCG
CGCAGGGGCACAGCCAGTCTATGGCCAGCGAGAATTACTTTACCCATCGCGGTTTCGATAATGACTCGCCGGCAGATCGC
GCGCGTGCTGCCGGTTACGGCGGACGGCAGATCGGTGAAAACATCGCCGCGGGGCAGAGCACGGCCAGCAAGGCCATGGC
GAGCTGGCTGGCCAGCCCGGGGCATTGCGCCAACCTGATGAACCCGATGTTTACCGAAGTCGGCGCGGCTTATGCGACGG
CTACCCATGCTGATTACGGTGTGTACTGGACCATGCTGTTTGGTGCGCCCTGA

Upstream 100 bases:

>100_bases
TGATATGGAAGTAACGCTTGCCAGCATAGGTGAGGCCACTGGAGAGATCGGCAAGCTTTGAGCACATGGCGGTACCGTAC
TCAAGTGTGCAGCGTGAACC

Downstream 100 bases:

>100_bases
TCAGCAGCCAGCACCGTAGCGATCTTGCTCACCTGGCAGTCAGGCCGTGTACCGTTTGTCGCCTGTTCGATGTTATTTGA
AAACCGCCACTGATGAGCAA

Product: Allergen V5/Tpx-1 related

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MSDFSGLTRALKCMPRLFLSESVLMPALPRCSWRIWLYLVALLPICASPVSAAEERQLVQAINDFRGQPQRCEARMTNIS
RALALNSSVALPIGFSGNLRDALKAAGYQAVTVRTVRLAGVQSADAAFDMLRSRYCGALLDPQYADIGITRQGSDWRVVL
AKPLIDESLEDARSAGRALLAQVNAARAKPRMCGKRPFPSARPLSWNTTLETAAQGHSQSMASENYFTHRGFDNDSPADR
ARAAGYGGRQIGENIAAGQSTASKAMASWLASPGHCANLMNPMFTEVGAAYATATHADYGVYWTMLFGAP

Sequences:

>Translated_310_residues
MSDFSGLTRALKCMPRLFLSESVLMPALPRCSWRIWLYLVALLPICASPVSAAEERQLVQAINDFRGQPQRCEARMTNIS
RALALNSSVALPIGFSGNLRDALKAAGYQAVTVRTVRLAGVQSADAAFDMLRSRYCGALLDPQYADIGITRQGSDWRVVL
AKPLIDESLEDARSAGRALLAQVNAARAKPRMCGKRPFPSARPLSWNTTLETAAQGHSQSMASENYFTHRGFDNDSPADR
ARAAGYGGRQIGENIAAGQSTASKAMASWLASPGHCANLMNPMFTEVGAAYATATHADYGVYWTMLFGAP
>Mature_309_residues
SDFSGLTRALKCMPRLFLSESVLMPALPRCSWRIWLYLVALLPICASPVSAAEERQLVQAINDFRGQPQRCEARMTNISR
ALALNSSVALPIGFSGNLRDALKAAGYQAVTVRTVRLAGVQSADAAFDMLRSRYCGALLDPQYADIGITRQGSDWRVVLA
KPLIDESLEDARSAGRALLAQVNAARAKPRMCGKRPFPSARPLSWNTTLETAAQGHSQSMASENYFTHRGFDNDSPADRA
RAAGYGGRQIGENIAAGQSTASKAMASWLASPGHCANLMNPMFTEVGAAYATATHADYGVYWTMLFGAP

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SCP domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014044
- InterPro:   IPR014258 [H]

Pfam domain/function: PF00188 SCP [H]

EC number: NA

Molecular weight: Translated: 33497; Mature: 33365

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDFSGLTRALKCMPRLFLSESVLMPALPRCSWRIWLYLVALLPICASPVSAAEERQLVQ
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
AINDFRGQPQRCEARMTNISRALALNSSVALPIGFSGNLRDALKAAGYQAVTVRTVRLAG
HHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCEEEEEEEEHHHC
VQSADAAFDMLRSRYCGALLDPQYADIGITRQGSDWRVVLAKPLIDESLEDARSAGRALL
CCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHH
AQVNAARAKPRMCGKRPFPSARPLSWNTTLETAAQGHSQSMASENYFTHRGFDNDSPADR
HHHHHHHCCCHHCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHCCCCEECCCCCCCCHHH
ARAAGYGGRQIGENIAAGQSTASKAMASWLASPGHCANLMNPMFTEVGAAYATATHADYG
HHHCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
VYWTMLFGAP
EEEEEEECCC
>Mature Secondary Structure 
SDFSGLTRALKCMPRLFLSESVLMPALPRCSWRIWLYLVALLPICASPVSAAEERQLVQ
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
AINDFRGQPQRCEARMTNISRALALNSSVALPIGFSGNLRDALKAAGYQAVTVRTVRLAG
HHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCEEEEEEEEHHHC
VQSADAAFDMLRSRYCGALLDPQYADIGITRQGSDWRVVLAKPLIDESLEDARSAGRALL
CCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHH
AQVNAARAKPRMCGKRPFPSARPLSWNTTLETAAQGHSQSMASENYFTHRGFDNDSPADR
HHHHHHHCCCHHCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHCCCCEECCCCCCCCHHH
ARAAGYGGRQIGENIAAGQSTASKAMASWLASPGHCANLMNPMFTEVGAAYATATHADYG
HHHCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
VYWTMLFGAP
EEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]