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The map label for this gene is 66045606

Identifier: 66045606

GI number: 66045606

Start: 2748227

End: 2749099

Strand: Direct

Name: 66045606

Synonym: Psyr_2370

Alternate gene names: NA

Gene position: 2748227-2749099 (Clockwise)

Preceding gene: 66045604

Following gene: 66045607

Centisome position: 45.1

GC content: 62.54

Gene sequence:

>873_bases
ATGAACTGGCTGCCCGTTTCCGAGCACCGCTTCAAGCTGGCCGAAGGCGCCTTCTGGGATGCCGAGCAGCAGGCTTTGTA
CTGGGTCGACATTGCCGGGTTTCTGGTGTGTCGTCTGGTCGCCGGGCAGATCCGCCAATGGCGCATGCCGGAGCCAGTCT
CCGCATTTATTCCGACCGAGCAGGGTGATGCACTGGTGACACTGGCCAGCGGCGTCTATCGTTTGGACCTGGACTCCGAC
AAGACTTCCTTGCTGCCGTTCTGCGTGGCAGATCCCACACCCGGCAATCGCGCCAACGAAGCCAGGTGCGATGCACGCGG
CCACCTTTGGCTTGGCAGCATGCAGAACAACATCGATGCCGAGGGCGGCGACGTGCCTTTAGTGCGTCGTTCAGGCGGGT
TGTTCCGCGTTGAACCTGATGCCCGGGTGACTCGTTTGCTGGACGGGCAGGGCATCGTCAACACCCTGCTGTGGAATGAA
GAGGGCAGTGTGCTGTACAGCGCCGATACCCTGGACGACGTCATTTATCACTATCCGGTGCTTGCAGACGGTGGTCTGGG
GCCACGCAAGGTATGGGCGGCGAAACACGATCGAGGCTCACCCGACGGCTCGGCGATGGATGCCGAAGGGTATGTCTGGA
ATGCGCGCTGGGGTGGCAATTGCCTGATCCGCTTTGCCCCGGATGGCAGCGTTGACCGGGTTGTCGAGCTGCCGGTCAGC
CATCCCACCAGTTGTGTATTCGGCGGTCCTGGCCTGGAGACGTTGTACGTCACCAGTGCCGCCCCTGCCGATGCAAATGG
TCGCTTCGACGGCGCGCTGCTGATGGCGCAGGTTGGCGTCAAGGGCACGCCGTGTCAGCGGTTCGCCGGTTGA

Upstream 100 bases:

>100_bases
CCCGAACGCCGTGCAACGGGTCGGCGCAGGCAGAGGTTGGACAAGACCGCGACACAAACATCCAAAAGTGCCTTTACAAC
AATAACAAAGGACATTTTTC

Downstream 100 bases:

>100_bases
GAGGTTGAGAAACACGTCGCGCCGCCGTCTGTTTACGACGGGAGCGTGGTTGTAGATGCAAGGGTGACATTAGGTTACAT
AGCGGTCATCCGTTATATGG

Product: senescence marker protein-30 (SMP-30)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MNWLPVSEHRFKLAEGAFWDAEQQALYWVDIAGFLVCRLVAGQIRQWRMPEPVSAFIPTEQGDALVTLASGVYRLDLDSD
KTSLLPFCVADPTPGNRANEARCDARGHLWLGSMQNNIDAEGGDVPLVRRSGGLFRVEPDARVTRLLDGQGIVNTLLWNE
EGSVLYSADTLDDVIYHYPVLADGGLGPRKVWAAKHDRGSPDGSAMDAEGYVWNARWGGNCLIRFAPDGSVDRVVELPVS
HPTSCVFGGPGLETLYVTSAAPADANGRFDGALLMAQVGVKGTPCQRFAG

Sequences:

>Translated_290_residues
MNWLPVSEHRFKLAEGAFWDAEQQALYWVDIAGFLVCRLVAGQIRQWRMPEPVSAFIPTEQGDALVTLASGVYRLDLDSD
KTSLLPFCVADPTPGNRANEARCDARGHLWLGSMQNNIDAEGGDVPLVRRSGGLFRVEPDARVTRLLDGQGIVNTLLWNE
EGSVLYSADTLDDVIYHYPVLADGGLGPRKVWAAKHDRGSPDGSAMDAEGYVWNARWGGNCLIRFAPDGSVDRVVELPVS
HPTSCVFGGPGLETLYVTSAAPADANGRFDGALLMAQVGVKGTPCQRFAG
>Mature_290_residues
MNWLPVSEHRFKLAEGAFWDAEQQALYWVDIAGFLVCRLVAGQIRQWRMPEPVSAFIPTEQGDALVTLASGVYRLDLDSD
KTSLLPFCVADPTPGNRANEARCDARGHLWLGSMQNNIDAEGGDVPLVRRSGGLFRVEPDARVTRLLDGQGIVNTLLWNE
EGSVLYSADTLDDVIYHYPVLADGGLGPRKVWAAKHDRGSPDGSAMDAEGYVWNARWGGNCLIRFAPDGSVDRVVELPVS
HPTSCVFGGPGLETLYVTSAAPADANGRFDGALLMAQVGVKGTPCQRFAG

Specific function: Unknown

COG id: COG3386

COG function: function code G; Gluconolactonase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SMP-30/CGR1 family [H]

Homologues:

Organism=Homo sapiens, GI23111021, Length=290, Percent_Identity=27.9310344827586, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI4759036, Length=290, Percent_Identity=27.9310344827586, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24641471, Length=277, Percent_Identity=28.158844765343, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI18860103, Length=277, Percent_Identity=28.158844765343, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24641469, Length=277, Percent_Identity=28.158844765343, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI45551448, Length=277, Percent_Identity=28.158844765343, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24646912, Length=269, Percent_Identity=26.3940520446097, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI24646910, Length=269, Percent_Identity=26.3940520446097, Blast_Score=89, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR013658
- InterPro:   IPR005511 [H]

Pfam domain/function: PF08450 SGL [H]

EC number: NA

Molecular weight: Translated: 31429; Mature: 31429

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWLPVSEHRFKLAEGAFWDAEQQALYWVDIAGFLVCRLVAGQIRQWRMPEPVSAFIPTE
CCCCCCCCCCEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEECCCC
QGDALVTLASGVYRLDLDSDKTSLLPFCVADPTPGNRANEARCDARGHLWLGSMQNNIDA
CCCEEEEEECCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCC
EGGDVPLVRRSGGLFRVEPDARVTRLLDGQGIVNTLLWNEEGSVLYSADTLDDVIYHYPV
CCCCEEEEEECCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEECCCHHHHHHHCCE
LADGGLGPRKVWAAKHDRGSPDGSAMDAEGYVWNARWGGNCLIRFAPDGSVDRVVELPVS
EECCCCCHHHEEEECCCCCCCCCCEECCCCEEEECEECCCEEEEECCCCCCCEEEEECCC
HPTSCVFGGPGLETLYVTSAAPADANGRFDGALLMAQVGVKGTPCQRFAG
CCCEEEECCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCHHHCCC
>Mature Secondary Structure
MNWLPVSEHRFKLAEGAFWDAEQQALYWVDIAGFLVCRLVAGQIRQWRMPEPVSAFIPTE
CCCCCCCCCCEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEECCCC
QGDALVTLASGVYRLDLDSDKTSLLPFCVADPTPGNRANEARCDARGHLWLGSMQNNIDA
CCCEEEEEECCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCC
EGGDVPLVRRSGGLFRVEPDARVTRLLDGQGIVNTLLWNEEGSVLYSADTLDDVIYHYPV
CCCCEEEEEECCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEECCCHHHHHHHCCE
LADGGLGPRKVWAAKHDRGSPDGSAMDAEGYVWNARWGGNCLIRFAPDGSVDRVVELPVS
EECCCCCHHHEEEECCCCCCCCCCEECCCCEEEECEECCCEEEEECCCCCCCEEEEECCC
HPTSCVFGGPGLETLYVTSAAPADANGRFDGALLMAQVGVKGTPCQRFAG
CCCEEEECCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA