| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045591
Identifier: 66045591
GI number: 66045591
Start: 2731109
End: 2731615
Strand: Reverse
Name: 66045591
Synonym: Psyr_2355
Alternate gene names: NA
Gene position: 2731615-2731109 (Counterclockwise)
Preceding gene: 66045593
Following gene: 66045588
Centisome position: 44.83
GC content: 56.8
Gene sequence:
>507_bases ATGAGTCTGGAATTGATCGCCTCAAAAAGCAGCTTGTTGACCATCGAGGAGCGCGCTGCGATTGCCGAGATCGAGGCCAC GACCAATGTGCTGCGCCTTGTCACTCGCCTGACAGGCATGCGCTTCGCTGGTATCGCCAAATTTACCGACGCAGACTGGA TCGCCTGTTCTGTCTATGACCCCACTGACCTGGGTATCGACGACGGCGATGTGTTCGAACTCGAGACCACGCTCTGTAAC GAGTTTTGTACCAATCCCCAGGCACTGTTCGTGCCGCAGATCAGCACGAACGGCCGGTATGCGAACCTGCCAGTCGTGAA GCGCTACGCCATCGAAAGCTATGCTGGCGTGCCGATCTACCTTCCCGACGGACAGCTGTATGGTGCGTTATGCGCTCTGG ACTCAAGAACGACACTGTTCGACGACCCCGATCTGGCGGAAACCCTGACCCTGTTCGCCCGATTGATCGGGTGCATTTTC TTCGCCAACATCAACGAAGGCAGCTGA
Upstream 100 bases:
>100_bases TGAAAATAAATCCTCGCAGGCGCGACCAACCCCGATGGCATTTTCATTGCAGTCAGTTAGCATGGGCCGTTACCCACACT TGGGTATTCTGGAGAAGTAC
Downstream 100 bases:
>100_bases TCCGGGGCTGCGTCCTGAAGCAACGCTGTCGACTCACGGGCTGCTCTGCCAGCGCATGCAGCGGCTAAGACTCGAGCAAG TCGCTGCTGAACTGGCCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: Sensor Histidine Kinase; GAF Domain Protein; PAS Sensor Protein; GAF Domain-Containing Protein; Two Component Transcriptional Regulator LuxR Family; Two-Component Regulatory System Sensor Kinase Protein; Two-Component System Sensor Histidine Kinase
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MSLELIASKSSLLTIEERAAIAEIEATTNVLRLVTRLTGMRFAGIAKFTDADWIACSVYDPTDLGIDDGDVFELETTLCN EFCTNPQALFVPQISTNGRYANLPVVKRYAIESYAGVPIYLPDGQLYGALCALDSRTTLFDDPDLAETLTLFARLIGCIF FANINEGS
Sequences:
>Translated_168_residues MSLELIASKSSLLTIEERAAIAEIEATTNVLRLVTRLTGMRFAGIAKFTDADWIACSVYDPTDLGIDDGDVFELETTLCN EFCTNPQALFVPQISTNGRYANLPVVKRYAIESYAGVPIYLPDGQLYGALCALDSRTTLFDDPDLAETLTLFARLIGCIF FANINEGS >Mature_167_residues SLELIASKSSLLTIEERAAIAEIEATTNVLRLVTRLTGMRFAGIAKFTDADWIACSVYDPTDLGIDDGDVFELETTLCNE FCTNPQALFVPQISTNGRYANLPVVKRYAIESYAGVPIYLPDGQLYGALCALDSRTTLFDDPDLAETLTLFARLIGCIFF ANINEGS
Specific function: Unknown
COG id: COG2203
COG function: function code T; FOG: GAF domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18375; Mature: 18244
Theoretical pI: Translated: 3.98; Mature: 3.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLELIASKSSLLTIEERAAIAEIEATTNVLRLVTRLTGMRFAGIAKFTDADWIACSVYD CCEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHCCEEEECCCCEEEEEECC PTDLGIDDGDVFELETTLCNEFCTNPQALFVPQISTNGRYANLPVVKRYAIESYAGVPIY CCCCCCCCCCEEEHHHHHHHHHHCCCCEEEEEEECCCCEEECCCHHHHHHHHHHCCCEEE LPDGQLYGALCALDSRTTLFDDPDLAETLTLFARLIGCIFFANINEGS CCCCCEEEEEEEECCCCEECCCCCHHHHHHHHHHHHHHHEEECCCCCC >Mature Secondary Structure SLELIASKSSLLTIEERAAIAEIEATTNVLRLVTRLTGMRFAGIAKFTDADWIACSVYD CEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHCCEEEECCCCEEEEEECC PTDLGIDDGDVFELETTLCNEFCTNPQALFVPQISTNGRYANLPVVKRYAIESYAGVPIY CCCCCCCCCCEEEHHHHHHHHHHCCCCEEEEEEECCCCEEECCCHHHHHHHHHHCCCEEE LPDGQLYGALCALDSRTTLFDDPDLAETLTLFARLIGCIFFANINEGS CCCCCEEEEEEEECCCCEECCCCCHHHHHHHHHHHHHHHEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA