Click here to switch to the map view.

The map label for this gene is hisS [H]

Identifier: 66045587

GI number: 66045587

Start: 2727077

End: 2727658

Strand: Reverse

Name: hisS [H]

Synonym: Psyr_2351

Alternate gene names: 66045587

Gene position: 2727658-2727077 (Counterclockwise)

Preceding gene: 66045588

Following gene: 66045586

Centisome position: 44.76

GC content: 61.86

Gene sequence:

>582_bases
GTGACACAGAAAACCGTTTCCGGAGCTATCTTCATCGAAGCCGGGGCTGAGGAAGCGATAGTGCCGGCCTTATGGGGCCA
GGACACCTTTATCGAAAAAGCCGGCGGCAGCGAAATCATCGGCCAGATGTGGGCCTTCGAGGACAAGGCCGGACGCGCCT
GTTGCCTGATACCCGAAGCCACGGCGCTGTTTCAGGAGCGCAGTGAAGCGCTGCTTGAGGGGCGACGTGACGCAATGTTT
TTCTACGTCGCACGCTGTTATCGCTACGAGCGCCCGCAAGCCGGACGCTACCGCGAATTCACCCAGCTGGGGCTGGAAAT
CCTCAGCCCTTCACCGCAGCAGGCGTTGCTGCGCAGCCAGGCCATCTGCACCGGTTTTCTGGATTCGCTGGGCCTGGACT
ATGAACTCAATACCGCCGTGAAACGGGGCCTGAGCTACTACCTGGAAGGCAACGGCTTCGAGGTGCGATGTTCGCGCCTG
GGTGCGCAGCAACAAGTGGTCGGCGGCGGCGCCTATCGGGAGGGTGCCGGGTTTGGCATCGGACTGGAGCGGCTGGTATT
GGCGCTTGGGTGCGGCCAATAG

Upstream 100 bases:

>100_bases
CATGGCGCCTTTTTTATTGCCTGAAAAAACTGGAGATCATCACCCATGACCATGCTACGCGGAACCCGCATCGTGACCGG
AACAGAAGCCGCAACCCTGC

Downstream 100 bases:

>100_bases
CGCCCATCCTGTAACTGGCCGTAGAAGCGCAACGCGTTACACTGCGCTTCTACCCTGCCCCCGACCCGAGGCCCCCGTAT
GAAAGTTGGTGTGATTTCCG

Product: tRNA synthetase, class-II (G, H, P and S)

Products: NA

Alternate protein names: Histidine--tRNA ligase; HisRS [H]

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MTQKTVSGAIFIEAGAEEAIVPALWGQDTFIEKAGGSEIIGQMWAFEDKAGRACCLIPEATALFQERSEALLEGRRDAMF
FYVARCYRYERPQAGRYREFTQLGLEILSPSPQQALLRSQAICTGFLDSLGLDYELNTAVKRGLSYYLEGNGFEVRCSRL
GAQQQVVGGGAYREGAGFGIGLERLVLALGCGQ

Sequences:

>Translated_193_residues
MTQKTVSGAIFIEAGAEEAIVPALWGQDTFIEKAGGSEIIGQMWAFEDKAGRACCLIPEATALFQERSEALLEGRRDAMF
FYVARCYRYERPQAGRYREFTQLGLEILSPSPQQALLRSQAICTGFLDSLGLDYELNTAVKRGLSYYLEGNGFEVRCSRL
GAQQQVVGGGAYREGAGFGIGLERLVLALGCGQ
>Mature_192_residues
TQKTVSGAIFIEAGAEEAIVPALWGQDTFIEKAGGSEIIGQMWAFEDKAGRACCLIPEATALFQERSEALLEGRRDAMFF
YVARCYRYERPQAGRYREFTQLGLEILSPSPQQALLRSQAICTGFLDSLGLDYELNTAVKRGLSYYLEGNGFEVRCSRLG
AQQQVVGGGAYREGAGFGIGLERLVLALGCGQ

Specific function: Unknown

COG id: COG0124

COG function: function code J; Histidyl-tRNA synthetase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002314
- InterPro:   IPR006195
- InterPro:   IPR004154
- InterPro:   IPR015807
- InterPro:   IPR004516 [H]

Pfam domain/function: PF03129 HGTP_anticodon; PF00587 tRNA-synt_2b [H]

EC number: =6.1.1.21 [H]

Molecular weight: Translated: 21097; Mature: 20966

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQKTVSGAIFIEAGAEEAIVPALWGQDTFIEKAGGSEIIGQMWAFEDKAGRACCLIPEA
CCCCCCCCEEEEECCCCCCEEHHHCCCCHHHHCCCCHHHHHHHHHCCCCCCCEEEECCHH
TALFQERSEALLEGRRDAMFFYVARCYRYERPQAGRYREFTQLGLEILSPSPQQALLRSQ
HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH
AICTGFLDSLGLDYELNTAVKRGLSYYLEGNGFEVRCSRLGAQQQVVGGGAYREGAGFGI
HHHHHHHHHHCCCEEHHHHHHCCCEEEECCCCCEEEHHHCCCHHHHHCCCCCCCCCCCCC
GLERLVLALGCGQ
CHHHHHHHHCCCC
>Mature Secondary Structure 
TQKTVSGAIFIEAGAEEAIVPALWGQDTFIEKAGGSEIIGQMWAFEDKAGRACCLIPEA
CCCCCCCEEEEECCCCCCEEHHHCCCCHHHHCCCCHHHHHHHHHCCCCCCCEEEECCHH
TALFQERSEALLEGRRDAMFFYVARCYRYERPQAGRYREFTQLGLEILSPSPQQALLRSQ
HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH
AICTGFLDSLGLDYELNTAVKRGLSYYLEGNGFEVRCSRLGAQQQVVGGGAYREGAGFGI
HHHHHHHHHHCCCEEHHHHHHCCCEEEECCCCCEEEHHHCCCHHHHHCCCCCCCCCCCCC
GLERLVLALGCGQ
CHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA