| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045566
Identifier: 66045566
GI number: 66045566
Start: 2706875
End: 2707927
Strand: Reverse
Name: 66045566
Synonym: Psyr_2329
Alternate gene names: NA
Gene position: 2707927-2706875 (Counterclockwise)
Preceding gene: 66045567
Following gene: 66045565
Centisome position: 44.44
GC content: 61.73
Gene sequence:
>1053_bases ATGAAAAGCACTAAACGTCTGGCCCTCGCCGGGCTGTCCTGCCTGCCGCTGGCCGCCGCACTCCTGTCAACGCCAGCGCT GGCCGAAACCACGCTGTATCTGGGCATGAACGGCGGGACCATGGAGCGCCTGTATGCCGATCAGGTGCTGCCGGCTTTCG AGAAGGCCAACAACGTCAAGGTGGTGATCGTGCCTGGCACGTCGGCCGATATCCTCGCCAAGGTTCAGGCGAGCAAGGAC AACCCGCAGATGCACGTCATCTTTCTCGACGACGGCATCATGTACCGGGCCATCTCCATGGGCCTGTGCGACACGCTGCA ACCCAGCACCAGCCTGGCCGACCTGCCGGCCAAGGCCAAAATCAAGGAACAGGCAGCAGCCGTCAGCCTGGGTGTGACCG GCCTGGCCTACAACACGCGGATGTTCAAGGAACAGGGCTGGAGCGCGCCCACCTCGTGGATGGACCTTGCCGACAAACGT TTCAAGGACAAGGTGGTGTTCCAGTCACTGGCCTCCTCGACCTTCGGCCTGCATGGCTTTCTAATGTTCAACCGTATCCA GGGCGGCAGCGAGAAAGACGTCGAACCCGGCTTCAAGGCCTGGCCGAAAACCATCGGCCCGAACGTGCTGGAATACATCG CCAGCTCGGCGAAGATCTCGGAAATGGTCCAGACCGACGAAGCTGCCCTGTTCCCGCTGACGCCGACCCAGGTCACCGCG CTGAAGATCAAGGGCGTACCGGTGGAATACGCATCGCCCAAGGAAGGCGGCGTGGTGTTGAACGTGGCTGAATGCGCGAT AGCCAACAACAACCAGCCGGAGCTGGCGCAGAAGCTGGCCGCTTATCTGCTGACGCCGGAAGCACAGGCGCCTGCGCTGG AGTTCGGTGACCAGATCCCGTCGAACCCGAAAACCCCGACCACTGACAAGACACGCAGTCAGGTCGAGGCCATGGAGAAG TATCTGGAAACGGCGGTGACCATCGACTGGGATCAGGTCAATCAGATCCGTCCCGAGTGGAACGCACGCTGGAGCCGCAG TATCGAGCGCTAG
Upstream 100 bases:
>100_bases ATGCCTTTTCCATCGGCCGCTTTCAGCAAATCGTCCTGCAACCCCCTGCTATCGAACCTGTTACCAACGTCATCCCATTG CACAGAGGAAGGTCGTCACT
Downstream 100 bases:
>100_bases GCCTCGGCGGCGGCACCGAAAGGCATCGCCGTGCGTAAAAGACGCACGCTGATTGCCATCCGGCAAATTATTTCAACTTA TTACCGTGCACGGGAGTCCC
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: TbpA Protein; ABC Transporter
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MKSTKRLALAGLSCLPLAAALLSTPALAETTLYLGMNGGTMERLYADQVLPAFEKANNVKVVIVPGTSADILAKVQASKD NPQMHVIFLDDGIMYRAISMGLCDTLQPSTSLADLPAKAKIKEQAAAVSLGVTGLAYNTRMFKEQGWSAPTSWMDLADKR FKDKVVFQSLASSTFGLHGFLMFNRIQGGSEKDVEPGFKAWPKTIGPNVLEYIASSAKISEMVQTDEAALFPLTPTQVTA LKIKGVPVEYASPKEGGVVLNVAECAIANNNQPELAQKLAAYLLTPEAQAPALEFGDQIPSNPKTPTTDKTRSQVEAMEK YLETAVTIDWDQVNQIRPEWNARWSRSIER
Sequences:
>Translated_350_residues MKSTKRLALAGLSCLPLAAALLSTPALAETTLYLGMNGGTMERLYADQVLPAFEKANNVKVVIVPGTSADILAKVQASKD NPQMHVIFLDDGIMYRAISMGLCDTLQPSTSLADLPAKAKIKEQAAAVSLGVTGLAYNTRMFKEQGWSAPTSWMDLADKR FKDKVVFQSLASSTFGLHGFLMFNRIQGGSEKDVEPGFKAWPKTIGPNVLEYIASSAKISEMVQTDEAALFPLTPTQVTA LKIKGVPVEYASPKEGGVVLNVAECAIANNNQPELAQKLAAYLLTPEAQAPALEFGDQIPSNPKTPTTDKTRSQVEAMEK YLETAVTIDWDQVNQIRPEWNARWSRSIER >Mature_350_residues MKSTKRLALAGLSCLPLAAALLSTPALAETTLYLGMNGGTMERLYADQVLPAFEKANNVKVVIVPGTSADILAKVQASKD NPQMHVIFLDDGIMYRAISMGLCDTLQPSTSLADLPAKAKIKEQAAAVSLGVTGLAYNTRMFKEQGWSAPTSWMDLADKR FKDKVVFQSLASSTFGLHGFLMFNRIQGGSEKDVEPGFKAWPKTIGPNVLEYIASSAKISEMVQTDEAALFPLTPTQVTA LKIKGVPVEYASPKEGGVVLNVAECAIANNNQPELAQKLAAYLLTPEAQAPALEFGDQIPSNPKTPTTDKTRSQVEAMEK YLETAVTIDWDQVNQIRPEWNARWSRSIER
Specific function: Unknown
COG id: COG1840
COG function: function code P; ABC-type Fe3+ transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38024; Mature: 38024
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSTKRLALAGLSCLPLAAALLSTPALAETTLYLGMNGGTMERLYADQVLPAFEKANNVK CCCCHHHHHHCCHHHHHHHHHHCCCCHHEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEE VVIVPGTSADILAKVQASKDNPQMHVIFLDDGIMYRAISMGLCDTLQPSTSLADLPAKAK EEEECCCCHHHHEEEECCCCCCCEEEEEECCCCEEHHHHHHHHCCCCCCCCHHCCCCHHH IKEQAAAVSLGVTGLAYNTRMFKEQGWSAPTSWMDLADKRFKDKVVFQSLASSTFGLHGF HHHHHHHHHHCCEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHE LMFNRIQGGSEKDVEPGFKAWPKTIGPNVLEYIASSAKISEMVQTDEAALFPLTPTQVTA EEEHHCCCCCCCCCCCCHHHCCHHCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEE LKIKGVPVEYASPKEGGVVLNVAECAIANNNQPELAQKLAAYLLTPEAQAPALEFGDQIP EEEECCCEECCCCCCCCEEEEEEHEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHCCCCC SNPKTPTTDKTRSQVEAMEKYLETAVTIDWDQVNQIRPEWNARWSRSIER CCCCCCCCCHHHHHHHHHHHHHHHHEECCHHHHHCCCCCCCCHHHHCCCC >Mature Secondary Structure MKSTKRLALAGLSCLPLAAALLSTPALAETTLYLGMNGGTMERLYADQVLPAFEKANNVK CCCCHHHHHHCCHHHHHHHHHHCCCCHHEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEE VVIVPGTSADILAKVQASKDNPQMHVIFLDDGIMYRAISMGLCDTLQPSTSLADLPAKAK EEEECCCCHHHHEEEECCCCCCCEEEEEECCCCEEHHHHHHHHCCCCCCCCHHCCCCHHH IKEQAAAVSLGVTGLAYNTRMFKEQGWSAPTSWMDLADKRFKDKVVFQSLASSTFGLHGF HHHHHHHHHHCCEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHE LMFNRIQGGSEKDVEPGFKAWPKTIGPNVLEYIASSAKISEMVQTDEAALFPLTPTQVTA EEEHHCCCCCCCCCCCCHHHCCHHCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEE LKIKGVPVEYASPKEGGVVLNVAECAIANNNQPELAQKLAAYLLTPEAQAPALEFGDQIP EEEECCCEECCCCCCCCEEEEEEHEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHCCCCC SNPKTPTTDKTRSQVEAMEKYLETAVTIDWDQVNQIRPEWNARWSRSIER CCCCCCCCCHHHHHHHHHHHHHHHHEECCHHHHHCCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA