| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045560
Identifier: 66045560
GI number: 66045560
Start: 2701116
End: 2701490
Strand: Direct
Name: 66045560
Synonym: Psyr_2323
Alternate gene names: NA
Gene position: 2701116-2701490 (Clockwise)
Preceding gene: 66045559
Following gene: 66045562
Centisome position: 44.33
GC content: 39.73
Gene sequence:
>375_bases ATGACATTCAGAGAGTTCAACATGCCTGCAGAAGAGGTTGCACGTCTTGCTGGGGTTACGCCTGAATTATCTGGTAATCA AGGTGAACCTAAAAGACCGGGATCCAAGACGTTACTGAATAAGTCTTATGTGATCTTCTCTAAAAACCTTCCAGAAGATT CCGATATGGCAGAAGATTTATCGTTTTTTTTATCGGAGCTTGGTGGGGTGGAAAAAATTATGCACATGAAAGAAGTTGTT AGTCCCAAGTTTATAGAGTTTAATTTTTACTTGCCCAGTCGGACGTCTGAAACGATACAGGACGGGTATTTGTCTTACGA GAACATTGAAGCAATGTACAACCTAAAAGCAACTATTGGCTTTAACTACTTTTAG
Upstream 100 bases:
>100_bases ACGATAAAACTACGGGCTTTAAATGGCTTTGGAATGGAAAAAGCGGATCGAGTAAAAACCCATTATGAGTATTAAAATTC GAAAGCCTAAATCAGTATCG
Downstream 100 bases:
>100_bases GGGGCGAACAAGTCTCAAATATGCGAAAATCGCCTGATAACCTGATCCTTCACGGATTTTCTCTAGCCAAGGTTATAGAG AATGAAGAGGATGAAGTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MTFREFNMPAEEVARLAGVTPELSGNQGEPKRPGSKTLLNKSYVIFSKNLPEDSDMAEDLSFFLSELGGVEKIMHMKEVV SPKFIEFNFYLPSRTSETIQDGYLSYENIEAMYNLKATIGFNYF
Sequences:
>Translated_124_residues MTFREFNMPAEEVARLAGVTPELSGNQGEPKRPGSKTLLNKSYVIFSKNLPEDSDMAEDLSFFLSELGGVEKIMHMKEVV SPKFIEFNFYLPSRTSETIQDGYLSYENIEAMYNLKATIGFNYF >Mature_123_residues TFREFNMPAEEVARLAGVTPELSGNQGEPKRPGSKTLLNKSYVIFSKNLPEDSDMAEDLSFFLSELGGVEKIMHMKEVVS PKFIEFNFYLPSRTSETIQDGYLSYENIEAMYNLKATIGFNYF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14126; Mature: 13995
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFREFNMPAEEVARLAGVTPELSGNQGEPKRPGSKTLLNKSYVIFSKNLPEDSDMAEDL CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHH SFFLSELGGVEKIMHMKEVVSPKFIEFNFYLPSRTSETIQDGYLSYENIEAMYNLKATIG HHHHHHHCCHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHCCCCHHHHHHHHEEEEEEC FNYF CCCC >Mature Secondary Structure TFREFNMPAEEVARLAGVTPELSGNQGEPKRPGSKTLLNKSYVIFSKNLPEDSDMAEDL CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHH SFFLSELGGVEKIMHMKEVVSPKFIEFNFYLPSRTSETIQDGYLSYENIEAMYNLKATIG HHHHHHHCCHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHCCCCHHHHHHHHEEEEEEC FNYF CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA