| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is fhuA [H]
Identifier: 66045469
GI number: 66045469
Start: 2590553
End: 2592664
Strand: Reverse
Name: fhuA [H]
Synonym: Psyr_2229
Alternate gene names: 66045469
Gene position: 2592664-2590553 (Counterclockwise)
Preceding gene: 66045470
Following gene: 66045468
Centisome position: 42.55
GC content: 60.8
Gene sequence:
>2112_bases ATGTCGTCTCGTAGAATCGTGTCTCTGGCAGGCTTGGCAATCGGGGTTTTTGGCAACACGGGTTACGCGGAGGAAAGCCC GCAGACCATTGAACTGGAAAGCGTCAACGTCACTTCCGACTATCAGTACGAGACGGCGACCAGCCCGGTCCAGGGCTATC GCGCCACCCGCTCGGCCACGGCCACCAAGACCGACACCGCCATCGCGGATATCCCGCAGTCGATCAGCGTCGTACCTGCC TCAGTACTCAAGGACCTTGGCAGCAACAATGTCGAGCGCGCGCTGGATTTTGCCGGCGGCGTATCCAAGCAGAATAACTT CGGCGGTCTGACGCTTTACGAGTACAGCATCCGCGGCTTCACCACGTCCGAGTTCTACAAGGACGGCTTCAGCGCCAACC GCGGTTACCCAGCCACGCCGGATGCCGCAAATATCGAACGTATCGAAGTGCTCAAAGGCCCCGCCGCCAGCCTGTACGGG CGTGGCGATCCGGGCGGCACGGTCAACATCGTCAGCAAAAAACCCCAGCGTGAAGCCTTTACCACCTTGCAGACCAGCGC AGGCAGTTGGGATCGCTATCGCACCGCGCTGGACGTCAACACGCCGCTGGATGAAGAAGGCAATCTGCTTTCGCGGGTCA ATCTGGCCGTCGAAGACAACAACAGCTTTCGTGACCATGTAGAGAGCAAACGGGTGTTTGTCGCCCCATCCTTCAGCTGG CAATTGAACCCTGACACCCGTCTGCTGCTGGAAACCGAGTTCGTGCGCCACACATCGACGTTCGACCGAGGCGTGGTCGC CCCCAACAACAAGTGGAGTGGCGTGTCGCGCTCGACCTTCCTCGGTGAGCCGGACGATGACATCGATAATGACAACAATA TGGTGCAGTTCGCCCTGGACCACCAGCTCAACGATGTGTGGTCGCTGCGTCTGGCCAGCCATTACAAACAGGGCGAGATG TCGGGTTTTGCCAGCGAGGCGCGCCCGCTGAATGCCGACGGGCACACGGTCAATCGCCGTTACCGTGAGCGCGACAACAA CTGGCATGACAGCATCACCCAGTTGGAGTTGCGCGGCCGTTTCGACGGCCTGGGCGTCGAGCACGAGGTGCTGATCGGCA CCGAGTACGAGAACTATCGCAAGAACGAACGCGTCACGACCATCGCCGGCAGCCCCTACGCCATCGACATCTACAACCCG GTCTACGGCCAGCCGAAACCCGCTGGCGCACGCTCCGGTACTGATTTTTACGAGCATGTCGAAAGCCGCGCGCTGAACCT GCAGGACCAGATTGTCTTTACCGACAAGCTGCGCGGCATGATCGGGGCACGCTACGAGCACTTCGATCAGCAGGTCGATG ACTTCACCACCAACGCCACTTCCGGGCAGCGCCAGGACGCTTTCACTCAACGCGCCGGGTTGCTTTATCAACTCACACCG CAGGTCGGCCTGTTCGCCAATGCCTCCACCTCGTTCAAGCCCAACAATGGCCTGGACGCCGCCGGCAAAACCTTCGACCC GGAAGAAGGCGTCGGCTACGAAGTCGGAATCAAAAGCGAACTGTTCGACCATCGCCTGAGCACGACCCTCGCCGCCTTTC ATATCGAAAAGGAAAACGTTCTGGCCCTGGACCCCGGCACCGACACCAATCGCGCGGTGGGCAAGGCTCGCAGCCAGGGC TTCGACGTGCAATTTACCGGGCAGGTCAGCGAAGCCGTTCGGGTCATCGGTGCCTTCGCCTACATCGACGCCGAAGTGAC CAAGGGCGACCAGAGCATCCCCACGGGCAGTCGCATCCTCGGTGTCGCCAAACACAGCGGCAGCCTGCTGGGCGTCTATG AGTTCCAGGAAGGCGCGTTGCGCGGCTCGGACGTGGGCGCGGCGTACACCTACGTCGGCGACCGCTCGGGGCAGTCGGGC GCTGACTTCGAGTTGCCGGCCTACCAGACCGTAGACCTGCTGGCGCATTACAAAGCCAGCGACAACGTCACGGTGGGTTT GAACCTGAACAACATTTTCGATGAAAAATACTACGAGCGCTCCTACAGCAACTACTGGGTCGCGCCTGGCGAACCGCGCA ACGTTACGGTCAGCCTGACCCTCAGCCTCTGA
Upstream 100 bases:
>100_bases GCCTGCTGATAGATGCGACGGTTACATCTCCCCTTCAACAAACAGCAATAATTCTCAACGGAGATGTTATATTGTATCTA TTACTATCAGGAAGTCTCAC
Downstream 100 bases:
>100_bases CGCCCATGAGACCCGGTCCAATACACCTCCGCTCACAACAACAAGGACGCATCATGCTTTCAAGCAAACCTTTCCTGGCC CTGAGCCTGCTCGGCGCTCT
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: Ferric hydroxamate receptor; Ferric hydroxamate uptake [H]
Number of amino acids: Translated: 703; Mature: 702
Protein sequence:
>703_residues MSSRRIVSLAGLAIGVFGNTGYAEESPQTIELESVNVTSDYQYETATSPVQGYRATRSATATKTDTAIADIPQSISVVPA SVLKDLGSNNVERALDFAGGVSKQNNFGGLTLYEYSIRGFTTSEFYKDGFSANRGYPATPDAANIERIEVLKGPAASLYG RGDPGGTVNIVSKKPQREAFTTLQTSAGSWDRYRTALDVNTPLDEEGNLLSRVNLAVEDNNSFRDHVESKRVFVAPSFSW QLNPDTRLLLETEFVRHTSTFDRGVVAPNNKWSGVSRSTFLGEPDDDIDNDNNMVQFALDHQLNDVWSLRLASHYKQGEM SGFASEARPLNADGHTVNRRYRERDNNWHDSITQLELRGRFDGLGVEHEVLIGTEYENYRKNERVTTIAGSPYAIDIYNP VYGQPKPAGARSGTDFYEHVESRALNLQDQIVFTDKLRGMIGARYEHFDQQVDDFTTNATSGQRQDAFTQRAGLLYQLTP QVGLFANASTSFKPNNGLDAAGKTFDPEEGVGYEVGIKSELFDHRLSTTLAAFHIEKENVLALDPGTDTNRAVGKARSQG FDVQFTGQVSEAVRVIGAFAYIDAEVTKGDQSIPTGSRILGVAKHSGSLLGVYEFQEGALRGSDVGAAYTYVGDRSGQSG ADFELPAYQTVDLLAHYKASDNVTVGLNLNNIFDEKYYERSYSNYWVAPGEPRNVTVSLTLSL
Sequences:
>Translated_703_residues MSSRRIVSLAGLAIGVFGNTGYAEESPQTIELESVNVTSDYQYETATSPVQGYRATRSATATKTDTAIADIPQSISVVPA SVLKDLGSNNVERALDFAGGVSKQNNFGGLTLYEYSIRGFTTSEFYKDGFSANRGYPATPDAANIERIEVLKGPAASLYG RGDPGGTVNIVSKKPQREAFTTLQTSAGSWDRYRTALDVNTPLDEEGNLLSRVNLAVEDNNSFRDHVESKRVFVAPSFSW QLNPDTRLLLETEFVRHTSTFDRGVVAPNNKWSGVSRSTFLGEPDDDIDNDNNMVQFALDHQLNDVWSLRLASHYKQGEM SGFASEARPLNADGHTVNRRYRERDNNWHDSITQLELRGRFDGLGVEHEVLIGTEYENYRKNERVTTIAGSPYAIDIYNP VYGQPKPAGARSGTDFYEHVESRALNLQDQIVFTDKLRGMIGARYEHFDQQVDDFTTNATSGQRQDAFTQRAGLLYQLTP QVGLFANASTSFKPNNGLDAAGKTFDPEEGVGYEVGIKSELFDHRLSTTLAAFHIEKENVLALDPGTDTNRAVGKARSQG FDVQFTGQVSEAVRVIGAFAYIDAEVTKGDQSIPTGSRILGVAKHSGSLLGVYEFQEGALRGSDVGAAYTYVGDRSGQSG ADFELPAYQTVDLLAHYKASDNVTVGLNLNNIFDEKYYERSYSNYWVAPGEPRNVTVSLTLSL >Mature_702_residues SSRRIVSLAGLAIGVFGNTGYAEESPQTIELESVNVTSDYQYETATSPVQGYRATRSATATKTDTAIADIPQSISVVPAS VLKDLGSNNVERALDFAGGVSKQNNFGGLTLYEYSIRGFTTSEFYKDGFSANRGYPATPDAANIERIEVLKGPAASLYGR GDPGGTVNIVSKKPQREAFTTLQTSAGSWDRYRTALDVNTPLDEEGNLLSRVNLAVEDNNSFRDHVESKRVFVAPSFSWQ LNPDTRLLLETEFVRHTSTFDRGVVAPNNKWSGVSRSTFLGEPDDDIDNDNNMVQFALDHQLNDVWSLRLASHYKQGEMS GFASEARPLNADGHTVNRRYRERDNNWHDSITQLELRGRFDGLGVEHEVLIGTEYENYRKNERVTTIAGSPYAIDIYNPV YGQPKPAGARSGTDFYEHVESRALNLQDQIVFTDKLRGMIGARYEHFDQQVDDFTTNATSGQRQDAFTQRAGLLYQLTPQ VGLFANASTSFKPNNGLDAAGKTFDPEEGVGYEVGIKSELFDHRLSTTLAAFHIEKENVLALDPGTDTNRAVGKARSQGF DVQFTGQVSEAVRVIGAFAYIDAEVTKGDQSIPTGSRILGVAKHSGSLLGVYEFQEGALRGSDVGAAYTYVGDRSGQSGA DFELPAYQTVDLLAHYKASDNVTVGLNLNNIFDEKYYERSYSNYWVAPGEPRNVTVSLTLSL
Specific function: This receptor binds the ferrichrome-iron ligand. It interacts with the tonB protein, which is responsible for energy coupling of the ferrichrome-promoted iron transport system. Acts as a receptor for bacteriophage T5 as well as T1, phi80 and colicin M. Bi
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=743, Percent_Identity=27.1870794078062, Blast_Score=226, Evalue=4e-60, Organism=Escherichia coli, GI1787344, Length=705, Percent_Identity=25.8156028368794, Blast_Score=155, Evalue=6e-39, Organism=Escherichia coli, GI1787024, Length=770, Percent_Identity=25.5844155844156, Blast_Score=150, Evalue=2e-37, Organism=Escherichia coli, GI1787723, Length=654, Percent_Identity=22.17125382263, Blast_Score=79, Evalue=7e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 77267; Mature: 77135
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSRRIVSLAGLAIGVFGNTGYAEESPQTIELESVNVTSDYQYETATSPVQGYRATRSAT CCCCEEEEEECEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHCCCC ATKTDTAIADIPQSISVVPASVLKDLGSNNVERALDFAGGVSKQNNFGGLTLYEYSIRGF CCCCCCHHHHCCCCHHCCHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEEECCC TTSEFYKDGFSANRGYPATPDAANIERIEVLKGPAASLYGRGDPGGTVNIVSKKPQREAF CHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHCCCCCCCCEEEEECCCCCHHHH TTLQTSAGSWDRYRTALDVNTPLDEEGNLLSRVNLAVEDNNSFRDHVESKRVFVAPSFSW HHHHCCCCCCHHEEEEEECCCCCCCCCCEEEEEEEEEECCCCHHHHHCCCEEEEECCCEE QLNPDTRLLLETEFVRHTSTFDRGVVAPNNKWSGVSRSTFLGEPDDDIDNDNNMVQFALD EECCCCEEEEEEHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC HQLNDVWSLRLASHYKQGEMSGFASEARPLNADGHTVNRRYRERDNNWHDSITQLELRGR CCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHCCCCHHCCCEEEEEECC FDGLGVEHEVLIGTEYENYRKNERVTTIAGSPYAIDIYNPVYGQPKPAGARSGTDFYEHV CCCCCCCEEEEEECCHHHHCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCHHHHHH ESRALNLQDQIVFTDKLRGMIGARYEHFDQQVDDFTTNATSGQRQDAFTQRAGLLYQLTP HHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCEEEEECC QVGLFANASTSFKPNNGLDAAGKTFDPEEGVGYEVGIKSELFDHRLSTTLAAFHIEKENV CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHEEEEEEECCCCE LALDPGTDTNRAVGKARSQGFDVQFTGQVSEAVRVIGAFAYIDAEVTKGDQSIPTGSRIL EEECCCCCCHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHEEEEEECCCCCCCCCCCEEE GVAKHSGSLLGVYEFQEGALRGSDVGAAYTYVGDRSGQSGADFELPAYQTVDLLAHYKAS EEEECCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCC DNVTVGLNLNNIFDEKYYERSYSNYWVAPGEPRNVTVSLTLSL CCEEEEEEHHHHHHHHHHHHCCCCEEECCCCCCEEEEEEEEEC >Mature Secondary Structure SSRRIVSLAGLAIGVFGNTGYAEESPQTIELESVNVTSDYQYETATSPVQGYRATRSAT CCCEEEEEECEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHCCCC ATKTDTAIADIPQSISVVPASVLKDLGSNNVERALDFAGGVSKQNNFGGLTLYEYSIRGF CCCCCCHHHHCCCCHHCCHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEEECCC TTSEFYKDGFSANRGYPATPDAANIERIEVLKGPAASLYGRGDPGGTVNIVSKKPQREAF CHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHCCCCCCCCEEEEECCCCCHHHH TTLQTSAGSWDRYRTALDVNTPLDEEGNLLSRVNLAVEDNNSFRDHVESKRVFVAPSFSW HHHHCCCCCCHHEEEEEECCCCCCCCCCEEEEEEEEEECCCCHHHHHCCCEEEEECCCEE QLNPDTRLLLETEFVRHTSTFDRGVVAPNNKWSGVSRSTFLGEPDDDIDNDNNMVQFALD EECCCCEEEEEEHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC HQLNDVWSLRLASHYKQGEMSGFASEARPLNADGHTVNRRYRERDNNWHDSITQLELRGR CCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHCCCCHHCCCEEEEEECC FDGLGVEHEVLIGTEYENYRKNERVTTIAGSPYAIDIYNPVYGQPKPAGARSGTDFYEHV CCCCCCCEEEEEECCHHHHCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCHHHHHH ESRALNLQDQIVFTDKLRGMIGARYEHFDQQVDDFTTNATSGQRQDAFTQRAGLLYQLTP HHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCEEEEECC QVGLFANASTSFKPNNGLDAAGKTFDPEEGVGYEVGIKSELFDHRLSTTLAAFHIEKENV CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHEEEEEEECCCCE LALDPGTDTNRAVGKARSQGFDVQFTGQVSEAVRVIGAFAYIDAEVTKGDQSIPTGSRIL EEECCCCCCHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHEEEEEECCCCCCCCCCCEEE GVAKHSGSLLGVYEFQEGALRGSDVGAAYTYVGDRSGQSGADFELPAYQTVDLLAHYKAS EEEECCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCC DNVTVGLNLNNIFDEKYYERSYSNYWVAPGEPRNVTVSLTLSL CCEEEEEEHHHHHHHHHHHHCCCCEEECCCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3079747; 8202364; 9278503; 2823072; 7515827; 8617231; 9856937; 9865695; 10850805 [H]