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The map label for this gene is xylH [C]

Identifier: 66045443

GI number: 66045443

Start: 2559557

End: 2560699

Strand: Reverse

Name: xylH [C]

Synonym: Psyr_2203

Alternate gene names: 66045443

Gene position: 2560699-2559557 (Counterclockwise)

Preceding gene: 66045444

Following gene: 66045442

Centisome position: 42.02

GC content: 61.42

Gene sequence:

>1143_bases
ATGAATGACATGACTGAAAAGCCGACGCTGCGGCCGCAGGCCTCGGTGTCCGGCGCCGGCAAGCCAGCGGGTGGCTGGTT
GACGCTGATCGAGCGCTACAGCCTGATCTGGCTGTCGCTGCTGTTGCTGGTGGCATTGCCGCTGATACTGGGGGATTTCC
GCCTCGGTCTGGCCGGCAAATACCTGAGCCTGGCGTTCTGCGCAGTGGGCATGGTGATGATCTGGGGCTACGGCGGCATC
CTCAGCCTCGGCCAGGGGATCTTCTTCGGCCTGGGCAGTTACATGATGGCGATGTACCTCAAACTCGAAGCCACCGCCAC
GGACGAAGCGGCCAGCGCCCTCGCCGCGTTCTACGGTTCGGCACTGCCGGACTTCATGATCTGGAACAGCGTCGAAGCCC
TGCCCTTGTGGTGGAAGCCGTTCGAGTCGGCGACCTTTACCCTGGCCGCGATCCTGATCCTGCCTGCACTGCTGGCGTTT
CTGTTCAGTTATGCCTACTTCAAAAAACGCGTGGGCGGCGTGTACTTCTCGATCATTACCCTGTCACTGGCCTCGATCAT
GTCGATCATGATCATCGGCCAACAGGGCTACACCGGCGGCGTCAATGGCCTGACCGATTTCAAGACGGCCTTCGGCCTGA
GCCTGCAGACGCCCCAGACACCCTGGATTCTCTACCTGATCACCACACTGTTGCTGCTGGCCAGCGTCGCGATGTGCGGC
TTCATCTTGCGCAGCCGCCTGGGCAAGGTGATCGTGGCGATCCGTGATCGCGAAGACCGGGTGCGTTTCTCGGGCTACAA
CACTGCGCTGTTCAAGGCCTTCATTTTTGCCGTGGCCGCGCTGATTTCCGCGCTGGGCGGGGTGATGTTCACCTTGCAGG
TCGGCCTGGCGTCGCCCTCGCTGGTGGGCATCATTCCGTCCACCGAAATCGTCATCTATGCCGCACTGGGTGGGCGCCTG
TCGCTGGTGGGTGCGGTGTACGGCACGCTGTTGATCGGTACGGCAAAAACCTGGCTGTCAGAAAACTTCGTCAGTTTCTG
GCAGTACTTCATCGGTTTCCTGTTCATGGCCGTGGTGCTGTTCCTGCCCACCGGGCTGGCCGGGCTGCTGCAGCGCCTGA
GCAACAAGGAGACGCAGTCATGA

Upstream 100 bases:

>100_bases
ACCACCGGTTCCATGGCCAAGGCGATCACCCTGCTGGTGGTCATCGTGCTGCTGTTCTTCCGCCCCAACGGCCTGTTCGC
CACGAAAGTGAGACGTTGAG

Downstream 100 bases:

>100_bases
GTGCAATGTTACTGAGTGTCGAAGACCTGACCGTGTCATTCGACGGTTTCAAGGCGGTCGACAACCTCAATTTCTATGTC
GAGGAGAACCAGGTGCATGT

Product: inner-membrane translocator

Products: ADP; phosphate; xylose [Cytoplasm] [C]

Alternate protein names: Inner-Membrane Translocator; Branched-Chain Amino Acid ABC Transporter Permease Protein; ABC Transporter Permease Protein; Urea ABC Transporter Permease UrtC; ABC Transporter ; Amino Acid Or Sugar ABC Transport System Permease Protein; Branched Chain Amino Acid ABC Transporter Permease; Branched-Chain Amino Acid Transport System Permease Protein; Branched-Chain Amino Acid ABC Transporter Permease; ABC Transporter-Like Protein; Branched-Chain Amino Acid Inner-Membrane Translocator; Branched-Chain Amino Acid Transport Permease; ABC Transporter Permease; ABC Transporter; Branched-Chain Amino Acid Transporter; Urea ABC Transporter Permease; Permease Of ABC Transporter; ABC Transporter Membrane Spanning Protein; Urea Or Short-Chain Amide ABC Transporter Permease Protein; Amide-Urea Transport System Permease Protein; Branched Chain Amino Acid ABC Transporter Permease Protein; Amide-Urea Transporter Permease Protein; Transmembrane Component Of ABC Transporter; High-Affinity Branched-Chain Amino Acid Transport System; Urea/Short Chain-Amide ABC Transporter Permease Protein; Urea ABC Transporter Permease Protein; ABC Transporter Related Protein; ABC Transporter Membrane Protein; ABC-Type Urea Transport System Permease Protein II; ABC-Type Transporter Permease Component; Urea Transport System Permease Protein; ABC Transporter Inner-Membrane Translocator; ABC-Type Transport System Permease Protein; Integral Membrane Protein; Urea ABC Transporter Inner-Membrane Subunit UrtC; ABC Branched Amino Acid Transporter Permease Component; Branched-Chain Amino Acid Transport System Permease; Permease Protein Of ABC Transporter; Urea Transport System Permease Component Protein; Permease Component Of ABC Transporter; Urea Or Short-Chain Amide ABC Transporter; Permease Transporter Transmembrane Protein; Urea ABC Transport Permease Component UrtC

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MNDMTEKPTLRPQASVSGAGKPAGGWLTLIERYSLIWLSLLLLVALPLILGDFRLGLAGKYLSLAFCAVGMVMIWGYGGI
LSLGQGIFFGLGSYMMAMYLKLEATATDEAASALAAFYGSALPDFMIWNSVEALPLWWKPFESATFTLAAILILPALLAF
LFSYAYFKKRVGGVYFSIITLSLASIMSIMIIGQQGYTGGVNGLTDFKTAFGLSLQTPQTPWILYLITTLLLLASVAMCG
FILRSRLGKVIVAIRDREDRVRFSGYNTALFKAFIFAVAALISALGGVMFTLQVGLASPSLVGIIPSTEIVIYAALGGRL
SLVGAVYGTLLIGTAKTWLSENFVSFWQYFIGFLFMAVVLFLPTGLAGLLQRLSNKETQS

Sequences:

>Translated_380_residues
MNDMTEKPTLRPQASVSGAGKPAGGWLTLIERYSLIWLSLLLLVALPLILGDFRLGLAGKYLSLAFCAVGMVMIWGYGGI
LSLGQGIFFGLGSYMMAMYLKLEATATDEAASALAAFYGSALPDFMIWNSVEALPLWWKPFESATFTLAAILILPALLAF
LFSYAYFKKRVGGVYFSIITLSLASIMSIMIIGQQGYTGGVNGLTDFKTAFGLSLQTPQTPWILYLITTLLLLASVAMCG
FILRSRLGKVIVAIRDREDRVRFSGYNTALFKAFIFAVAALISALGGVMFTLQVGLASPSLVGIIPSTEIVIYAALGGRL
SLVGAVYGTLLIGTAKTWLSENFVSFWQYFIGFLFMAVVLFLPTGLAGLLQRLSNKETQS
>Mature_380_residues
MNDMTEKPTLRPQASVSGAGKPAGGWLTLIERYSLIWLSLLLLVALPLILGDFRLGLAGKYLSLAFCAVGMVMIWGYGGI
LSLGQGIFFGLGSYMMAMYLKLEATATDEAASALAAFYGSALPDFMIWNSVEALPLWWKPFESATFTLAAILILPALLAF
LFSYAYFKKRVGGVYFSIITLSLASIMSIMIIGQQGYTGGVNGLTDFKTAFGLSLQTPQTPWILYLITTLLLLASVAMCG
FILRSRLGKVIVAIRDREDRVRFSGYNTALFKAFIFAVAALISALGGVMFTLQVGLASPSLVGIIPSTEIVIYAALGGRL
SLVGAVYGTLLIGTAKTWLSENFVSFWQYFIGFLFMAVVLFLPTGLAGLLQRLSNKETQS

Specific function: Part Of The Binding-Protein-Dependent Transport System For D-Xylose. Probably Responsible For The Translocation Of The Substrate Across The Membrane. [C]

COG id: COG4177

COG function: function code E; ABC-type branched-chain amino acid transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41086; Mature: 41086

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDMTEKPTLRPQASVSGAGKPAGGWLTLIERYSLIWLSLLLLVALPLILGDFRLGLAGK
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLSLAFCAVGMVMIWGYGGILSLGQGIFFGLGSYMMAMYLKLEATATDEAASALAAFYGS
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
ALPDFMIWNSVEALPLWWKPFESATFTLAAILILPALLAFLFSYAYFKKRVGGVYFSIIT
CCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSLASIMSIMIIGQQGYTGGVNGLTDFKTAFGLSLQTPQTPWILYLITTLLLLASVAMCG
HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCEECCCCCCHHHHHHHHHHHHHHHHHHH
FILRSRLGKVIVAIRDREDRVRFSGYNTALFKAFIFAVAALISALGGVMFTLQVGLASPS
HHHHHHHHHEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LVGIIPSTEIVIYAALGGRLSLVGAVYGTLLIGTAKTWLSENFVSFWQYFIGFLFMAVVL
EEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLPTGLAGLLQRLSNKETQS
HHCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNDMTEKPTLRPQASVSGAGKPAGGWLTLIERYSLIWLSLLLLVALPLILGDFRLGLAGK
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLSLAFCAVGMVMIWGYGGILSLGQGIFFGLGSYMMAMYLKLEATATDEAASALAAFYGS
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
ALPDFMIWNSVEALPLWWKPFESATFTLAAILILPALLAFLFSYAYFKKRVGGVYFSIIT
CCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSLASIMSIMIIGQQGYTGGVNGLTDFKTAFGLSLQTPQTPWILYLITTLLLLASVAMCG
HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCEECCCCCCHHHHHHHHHHHHHHHHHHH
FILRSRLGKVIVAIRDREDRVRFSGYNTALFKAFIFAVAALISALGGVMFTLQVGLASPS
HHHHHHHHHEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LVGIIPSTEIVIYAALGGRLSLVGAVYGTLLIGTAKTWLSENFVSFWQYFIGFLFMAVVL
EEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLPTGLAGLLQRLSNKETQS
HHCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; xylose [Periplasm]; H2O [C]

Specific reaction: ATP + xylose [Periplasm] + H2O = ADP + phosphate + xylose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA