| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is ureAB [H]
Identifier: 66045438
GI number: 66045438
Start: 2556211
End: 2556906
Strand: Reverse
Name: ureAB [H]
Synonym: Psyr_2198
Alternate gene names: 66045438
Gene position: 2556906-2556211 (Counterclockwise)
Preceding gene: 66045439
Following gene: 66045437
Centisome position: 41.96
GC content: 63.36
Gene sequence:
>696_bases ATGTTGTTGACCCCGACCGAACTTGAACGACTCACGCTGTACACCGCCGCCGAGCTGTCACGCAAACGCCGCAGCAAGGG CCTGCGCCTGAACTTCCCGGAGGCCTCAGCACTGATCGCCGACGAAATCCTCGAAGGCGCGCGTGAAGGTCGCAGCGTCG CCGAGCTGATCGGTTTCGGCTCAACGATCCTCAACACCGATGACGTGATGCCAGGGGTCGCCGACCTGCTGCCGGTGCTG CAGGTCGAGGGCACGTTTCCGGACGGCACCAAACTGGTCACTGTGCATCAACCAATCCGCCCGGGCCAACTGCCGCTGGC AGTCATGCCCACACCGGGGGAGATTCTTGCACCTGACGGCGATATCCACCTGAACGGCGACCGACCGACCGCCACCCTGC GCGCGATCAATACCGGCGACCGGCCAGTGCAGATCGGCAGTCACTATCACTTTTTCGAGGTCAACAAGGCGCTGGATTTC CCGCGTGAACGTGCCTTCGGCATGCACCTGGATATTCCCGCAGGCACGGCCGTGCGCTTCGAACCCGGCGAGCTGCGCGA AGTGCAACTGGTGCAGTTTGGCGGAACTGGCGACATCCACGGCTTCAGTGGCCTGACCAATGGCAACCTGCACGATCCGG CCTGCAAGCTCGCAGCGCTGGAGCGTGCCCGCGCCCAATTCTTCAAAGGAGCCTGA
Upstream 100 bases:
>100_bases CACACCCATGGGAGAAATCGCCGTGATGCGCCACGAAACCCAGGACCTGCGCCTGTTTGCCAATTGACCGGCCTTCTACT GACAGCTCTGGAGCCCCCTC
Downstream 100 bases:
>100_bases GGCATGGCAACGATGACGCGCAAGGAATACGCCGCCATGTACGGCCCCACGACTGGCGATGCCGTGCGCCTGGGCGACAC CTCGCTGCTGGCCGAAGTCG
Product: bifunctional urease subunit gamma/beta
Products: NA
Alternate protein names: Urea amidohydrolase subunit gamma/beta [H]
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MLLTPTELERLTLYTAAELSRKRRSKGLRLNFPEASALIADEILEGAREGRSVAELIGFGSTILNTDDVMPGVADLLPVL QVEGTFPDGTKLVTVHQPIRPGQLPLAVMPTPGEILAPDGDIHLNGDRPTATLRAINTGDRPVQIGSHYHFFEVNKALDF PRERAFGMHLDIPAGTAVRFEPGELREVQLVQFGGTGDIHGFSGLTNGNLHDPACKLAALERARAQFFKGA
Sequences:
>Translated_231_residues MLLTPTELERLTLYTAAELSRKRRSKGLRLNFPEASALIADEILEGAREGRSVAELIGFGSTILNTDDVMPGVADLLPVL QVEGTFPDGTKLVTVHQPIRPGQLPLAVMPTPGEILAPDGDIHLNGDRPTATLRAINTGDRPVQIGSHYHFFEVNKALDF PRERAFGMHLDIPAGTAVRFEPGELREVQLVQFGGTGDIHGFSGLTNGNLHDPACKLAALERARAQFFKGA >Mature_231_residues MLLTPTELERLTLYTAAELSRKRRSKGLRLNFPEASALIADEILEGAREGRSVAELIGFGSTILNTDDVMPGVADLLPVL QVEGTFPDGTKLVTVHQPIRPGQLPLAVMPTPGEILAPDGDIHLNGDRPTATLRAINTGDRPVQIGSHYHFFEVNKALDF PRERAFGMHLDIPAGTAVRFEPGELREVQLVQFGGTGDIHGFSGLTNGNLHDPACKLAALERARAQFFKGA
Specific function: Unknown
COG id: COG0832
COG function: function code E; Urea amidohydrolase (urease) beta subunit
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the urease beta subunit family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002026 - InterPro: IPR002019 - InterPro: IPR008223 - ProDom: PD002319 [H]
Pfam domain/function: PF00699 Urease_beta; PF00547 Urease_gamma [H]
EC number: =3.5.1.5 [H]
Molecular weight: Translated: 25007; Mature: 25007
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLTPTELERLTLYTAAELSRKRRSKGLRLNFPEASALIADEILEGAREGRSVAELIGFG CCCCCCCHHHEEHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHCCHHHHHHHHCC STILNTDDVMPGVADLLPVLQVEGTFPDGTKLVTVHQPIRPGQLPLAVMPTPGEILAPDG CCEECCCCCCCCHHHHHHHHEECCCCCCCCEEEEEECCCCCCCCCEEEECCCCCEECCCC DIHLNGDRPTATLRAINTGDRPVQIGSHYHFFEVNKALDFPRERAFGMHLDIPAGTAVRF CEEECCCCCCEEEEEECCCCCCEEECCEEEEEEECCHHCCCCHHHCCEEEECCCCCEEEE EPGELREVQLVQFGGTGDIHGFSGLTNGNLHDPACKLAALERARAQFFKGA CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLLTPTELERLTLYTAAELSRKRRSKGLRLNFPEASALIADEILEGAREGRSVAELIGFG CCCCCCCHHHEEHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHCCHHHHHHHHCC STILNTDDVMPGVADLLPVLQVEGTFPDGTKLVTVHQPIRPGQLPLAVMPTPGEILAPDG CCEECCCCCCCCHHHHHHHHEECCCCCCCCEEEEEECCCCCCCCCEEEECCCCCEECCCC DIHLNGDRPTATLRAINTGDRPVQIGSHYHFFEVNKALDFPRERAFGMHLDIPAGTAVRF CEEECCCCCCEEEEEECCCCCCEEECCEEEEEEECCHHCCCCHHHCCEEEECCCCCEEEE EPGELREVQLVQFGGTGDIHGFSGLTNGNLHDPACKLAALERARAQFFKGA CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12928499 [H]