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The map label for this gene is pbuA [H]

Identifier: 66045202

GI number: 66045202

Start: 2271070

End: 2273310

Strand: Reverse

Name: pbuA [H]

Synonym: Psyr_1962

Alternate gene names: 66045202

Gene position: 2273310-2271070 (Counterclockwise)

Preceding gene: 66045203

Following gene: 66045201

Centisome position: 37.31

GC content: 61.45

Gene sequence:

>2241_bases
ATGCACAACCCGTCACGACTCACCCCGCTCAGCAAAGCGTTGATGCTCAGTCAGATGTTCCGCTCCCGGCCATCCATGGC
GGCCATGGGTCTTGCGCTGTGCATGCCGGTCGCCGGTCAGGCACAGGAAACCGTCGCAGACGATTCGAACACCACGGGCA
CAGTCAATCTGGCCCCGACTGCAATCGACTCGCATTACCTGGGCACCACCACCGACGGCACCGGTTCCTACACCACCGGC
GCAGTGAGTATCGGCAAGGGTGCACCGCAATCGCTGCGCGAAACACCGCAATCGGTGAGCGTGGTGACTCGGCAAGTCAT
GGATGACAACAACCTCACCAGCCTCAGCGACGTGCTGGAAGACACCCCGGGTATCACTTTCCAGTACCGCAACTTCGGCG
GTCACGTGTACACCTCGCGTGGCTTCTCGCTGCTGGCGGAAAGCTTCCTGGTCGACGGCATTGGCGGTCAGGGCTATCAG
ATCACCGGCTGGATGCAGCCGGACGTGGCCATCTACGACCGTGTGGAAGTGCTGCGCGGCGCGTCAGGGCTGTTGGTCGG
TGCCGGGCAGCCCGGCGGCGCGGTCAATCTGGTGCGCAAACGCCCGACTGCCGATAACAAATTCTCGATCACCACCCGCG
CCGGCTCATGGGACCAGTACCGGGTCGACCTGGATGGCAGCGGCAAGCTCAACGATTCCGGCACCCTGCGCGGGCGCATG
GTCGCGGCCTACGATGACAGCGGCTCCTACCTGGACGGTCGCGACAGCCGCACGCCGCTGCTGTACGGCATCGTCGAAGC
CGACCTGAGCGATGACACCACCCTGACCATGAGCCTGCGTCGTCAGGAACAGGTCATCAACGGCTACTCGATCTATGGCC
TGCCGCGCTACAGCAACGGCCAGTCGCTGGGCCTGTCGCGCTCGACCAACCTGGCGCAGAAGTGGAACCGCCATGAAAGC
GACATGACCGAGGTGTTCACCGAAGTCGCGCATCGCTTCAATGAAGACTGGACCAGCCGGACGTCATTGACCTATTCCCA
GGGTGGCTTCGATCAGAACATTGCCTTTGCACGGGGCGCAGTGAATCCCGTGACGCTGGCGGGCTCCAACTTTCAGGGCA
CGCTGTTCCGCAAGGACGAGGTCGACAGCGTCGGTCTGAACAGCCAGCTGGAAGGCAACTTCAACGCGTTCGGCCTCGAA
CATCAGGTGACCCTGGGTGCCGACTGGTCGAAGCAGGAGGCCAACACGCATCAAGTTACGTTGACGAGACGGACCGCGAT
CAACATCTTCGATGTCGACCAGAACGCATTCGCCAAACCAGCCCGTCCGGCCTGGCAAACCGACATCGACACCACCGAAG
AACGCGCGGGTCTGTACGCCAACACGCGTATTCACCTGAGCGAACCGTTGAGCGTGGTGCTGGGCACGCGCCTCAGCTGG
TATGACTACAAGTACGACGTCAAAACCGGCTTGGCGAAGGATTACGAGTCCAAACAGACTCAGGAATTCACGCCCTTCGC
GGGTGTTATCTATGACATCAACAACAGCTGGTCGTGGTACGCCAGCTATGCCGACATCTTCACGCCACAGGCCAACTACG
TCACCGCTGGCGGCTCGCCACTGGACCCGGCCATCGGCTCCAACTACGAAACCGGCTTCAAGGGCGAGCTGTTCGACAAG
CGCATGAACCTGTCGATGGCGCTGTTCTATATCAAGCAGAAAGATGTGGCTGCTGTCGATATCGCGGCCCAGGATAACCT
TACAACGTGCCCTACCAGCTCCGACGGCTCCTGCTACCTGCAGGACGGCATCAGCCGCAGCAAGGGCGTCGACGTCGAGG
CCAGCGGCGAGGTACTGCCGGGGCTGCAAGTGTTCGGCGGTTACACCTACAACATGCTGCGCAACAACGGTGATTCGGAT
GTGGCTTACGAAACGCCGAAACACATGCTGCGCCTCAACACCAGCTACAACCTGCCGGGTGCCTGGAACCGCCTGACCCT
GGGCGCTGGAGTGTCGGCGGATTCGGGTTACGAAGTGCCCTACGACAAAGCACTCGGCGTAGCCGGTCGGGCCATCTGGG
ATGCCAGGGCGTCATGGAAACTGGACGAAAACTGGAAGGTGTCGCTCAACGCCGAAAACCTGTTCGACCGCAAGTACTAC
ACCACCTCGATCGCCACCGACCGCTCCAACGTCTACGGCGAACCGCGCAGCTACGTCCTGACCTTGCGGGGGGATTTCTG
A

Upstream 100 bases:

>100_bases
AAGTGGCTCACGCCTGCCCGGTCGACGGCTGGACCCGACTGCGCAGACCTGAACGACGCCCCCGATCTCCTTGCCGATAC
CCACTGGAAAGAGCCAATTC

Downstream 100 bases:

>100_bases
TCTAAGCTCAGCGTTATAGAAATCCCTGTGGGAGCGAGCTTGCTCGCGAAGGCAATGGTTCAGATGCCCTGATTTCCGGG
GCTGGACAGGCATCTTCGCG

Product: TonB-dependent siderophore receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 746; Mature: 746

Protein sequence:

>746_residues
MHNPSRLTPLSKALMLSQMFRSRPSMAAMGLALCMPVAGQAQETVADDSNTTGTVNLAPTAIDSHYLGTTTDGTGSYTTG
AVSIGKGAPQSLRETPQSVSVVTRQVMDDNNLTSLSDVLEDTPGITFQYRNFGGHVYTSRGFSLLAESFLVDGIGGQGYQ
ITGWMQPDVAIYDRVEVLRGASGLLVGAGQPGGAVNLVRKRPTADNKFSITTRAGSWDQYRVDLDGSGKLNDSGTLRGRM
VAAYDDSGSYLDGRDSRTPLLYGIVEADLSDDTTLTMSLRRQEQVINGYSIYGLPRYSNGQSLGLSRSTNLAQKWNRHES
DMTEVFTEVAHRFNEDWTSRTSLTYSQGGFDQNIAFARGAVNPVTLAGSNFQGTLFRKDEVDSVGLNSQLEGNFNAFGLE
HQVTLGADWSKQEANTHQVTLTRRTAINIFDVDQNAFAKPARPAWQTDIDTTEERAGLYANTRIHLSEPLSVVLGTRLSW
YDYKYDVKTGLAKDYESKQTQEFTPFAGVIYDINNSWSWYASYADIFTPQANYVTAGGSPLDPAIGSNYETGFKGELFDK
RMNLSMALFYIKQKDVAAVDIAAQDNLTTCPTSSDGSCYLQDGISRSKGVDVEASGEVLPGLQVFGGYTYNMLRNNGDSD
VAYETPKHMLRLNTSYNLPGAWNRLTLGAGVSADSGYEVPYDKALGVAGRAIWDARASWKLDENWKVSLNAENLFDRKYY
TTSIATDRSNVYGEPRSYVLTLRGDF

Sequences:

>Translated_746_residues
MHNPSRLTPLSKALMLSQMFRSRPSMAAMGLALCMPVAGQAQETVADDSNTTGTVNLAPTAIDSHYLGTTTDGTGSYTTG
AVSIGKGAPQSLRETPQSVSVVTRQVMDDNNLTSLSDVLEDTPGITFQYRNFGGHVYTSRGFSLLAESFLVDGIGGQGYQ
ITGWMQPDVAIYDRVEVLRGASGLLVGAGQPGGAVNLVRKRPTADNKFSITTRAGSWDQYRVDLDGSGKLNDSGTLRGRM
VAAYDDSGSYLDGRDSRTPLLYGIVEADLSDDTTLTMSLRRQEQVINGYSIYGLPRYSNGQSLGLSRSTNLAQKWNRHES
DMTEVFTEVAHRFNEDWTSRTSLTYSQGGFDQNIAFARGAVNPVTLAGSNFQGTLFRKDEVDSVGLNSQLEGNFNAFGLE
HQVTLGADWSKQEANTHQVTLTRRTAINIFDVDQNAFAKPARPAWQTDIDTTEERAGLYANTRIHLSEPLSVVLGTRLSW
YDYKYDVKTGLAKDYESKQTQEFTPFAGVIYDINNSWSWYASYADIFTPQANYVTAGGSPLDPAIGSNYETGFKGELFDK
RMNLSMALFYIKQKDVAAVDIAAQDNLTTCPTSSDGSCYLQDGISRSKGVDVEASGEVLPGLQVFGGYTYNMLRNNGDSD
VAYETPKHMLRLNTSYNLPGAWNRLTLGAGVSADSGYEVPYDKALGVAGRAIWDARASWKLDENWKVSLNAENLFDRKYY
TTSIATDRSNVYGEPRSYVLTLRGDF
>Mature_746_residues
MHNPSRLTPLSKALMLSQMFRSRPSMAAMGLALCMPVAGQAQETVADDSNTTGTVNLAPTAIDSHYLGTTTDGTGSYTTG
AVSIGKGAPQSLRETPQSVSVVTRQVMDDNNLTSLSDVLEDTPGITFQYRNFGGHVYTSRGFSLLAESFLVDGIGGQGYQ
ITGWMQPDVAIYDRVEVLRGASGLLVGAGQPGGAVNLVRKRPTADNKFSITTRAGSWDQYRVDLDGSGKLNDSGTLRGRM
VAAYDDSGSYLDGRDSRTPLLYGIVEADLSDDTTLTMSLRRQEQVINGYSIYGLPRYSNGQSLGLSRSTNLAQKWNRHES
DMTEVFTEVAHRFNEDWTSRTSLTYSQGGFDQNIAFARGAVNPVTLAGSNFQGTLFRKDEVDSVGLNSQLEGNFNAFGLE
HQVTLGADWSKQEANTHQVTLTRRTAINIFDVDQNAFAKPARPAWQTDIDTTEERAGLYANTRIHLSEPLSVVLGTRLSW
YDYKYDVKTGLAKDYESKQTQEFTPFAGVIYDINNSWSWYASYADIFTPQANYVTAGGSPLDPAIGSNYETGFKGELFDK
RMNLSMALFYIKQKDVAAVDIAAQDNLTTCPTSSDGSCYLQDGISRSKGVDVEASGEVLPGLQVFGGYTYNMLRNNGDSD
VAYETPKHMLRLNTSYNLPGAWNRLTLGAGVSADSGYEVPYDKALGVAGRAIWDARASWKLDENWKVSLNAENLFDRKYY
TTSIATDRSNVYGEPRSYVLTLRGDF

Specific function: Specific receptor for the siderophore ferric pseudobactin m114 [H]

COG id: COG4773

COG function: function code P; Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1787344, Length=767, Percent_Identity=31.0299869621904, Blast_Score=295, Evalue=8e-81,
Organism=Escherichia coli, GI1786344, Length=756, Percent_Identity=24.2063492063492, Blast_Score=129, Evalue=6e-31,
Organism=Escherichia coli, GI1787024, Length=727, Percent_Identity=22.8335625859697, Blast_Score=117, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR011662
- InterPro:   IPR000531
- InterPro:   IPR010917
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF07660 STN; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 81730; Mature: 81730

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: PS00178 AA_TRNA_LIGASE_I ; PS01156 TONB_DEPENDENT_REC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHNPSRLTPLSKALMLSQMFRSRPSMAAMGLALCMPVAGQAQETVADDSNTTGTVNLAPT
CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCEEEEECCC
AIDSHYLGTTTDGTGSYTTGAVSIGKGAPQSLRETPQSVSVVTRQVMDDNNLTSLSDVLE
CCCCCCCCCCCCCCCCEEECEEEECCCCCHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHH
DTPGITFQYRNFGGHVYTSRGFSLLAESFLVDGIGGQGYQITGWMQPDVAIYDRVEVLRG
CCCCCEEEEECCCCEEEECCCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCC
ASGLLVGAGQPGGAVNLVRKRPTADNKFSITTRAGSWDQYRVDLDGSGKLNDSGTLRGRM
CCCEEEECCCCCCEEEEEECCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCEEE
VAAYDDSGSYLDGRDSRTPLLYGIVEADLSDDTTLTMSLRRQEQVINGYSIYGLPRYSNG
EEEECCCCCEECCCCCCCCEEEEEEECCCCCCCEEEEEEHHHHHHHCCEEEEECCCCCCC
QSLGLSRSTNLAQKWNRHESDMTEVFTEVAHRFNEDWTSRTSLTYSQGGFDQNIAFARGA
CCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHCCC
VNPVTLAGSNFQGTLFRKDEVDSVGLNSQLEGNFNAFGLEHQVTLGADWSKQEANTHQVT
CCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEE
LTRRTAINIFDVDQNAFAKPARPAWQTDIDTTEERAGLYANTRIHLSEPLSVVLGTRLSW
EEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCEEEEEEEEECCCHHHHHCCEEEE
YDYKYDVKTGLAKDYESKQTQEFTPFAGVIYDINNSWSWYASYADIFTPQANYVTAGGSP
EEEEEEHHHCCHHCCCCCCCCCCCCCEEEEEEECCCCEEEEEHHHHCCCCCCEEECCCCC
LDPAIGSNYETGFKGELFDKRMNLSMALFYIKQKDVAAVDIAAQDNLTTCPTSSDGSCYL
CCCCCCCCCCCCCCCHHHHHHCCCEEEEEEEECCCCEEEEEEECCCCEECCCCCCCCEEE
QDGISRSKGVDVEASGEVLPGLQVFGGYTYNMLRNNGDSDVAYETPKHMLRLNTSYNLPG
ECCCCCCCCCCEECCCCCCCCCHHHCCEEEEEECCCCCCCCEECCCCCEEEECCCCCCCC
AWNRLTLGAGVSADSGYEVPYDKALGVAGRAIWDARASWKLDENWKVSLNAENLFDRKYY
CCCEEEECCCCCCCCCCCCCHHHHHCCCCCEEECCCCCEEECCCCEEEEEHHHHCCCEEE
TTSIATDRSNVYGEPRSYVLTLRGDF
EEEEECCCHHCCCCCCEEEEEEECCC
>Mature Secondary Structure
MHNPSRLTPLSKALMLSQMFRSRPSMAAMGLALCMPVAGQAQETVADDSNTTGTVNLAPT
CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCEEEEECCC
AIDSHYLGTTTDGTGSYTTGAVSIGKGAPQSLRETPQSVSVVTRQVMDDNNLTSLSDVLE
CCCCCCCCCCCCCCCCEEECEEEECCCCCHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHH
DTPGITFQYRNFGGHVYTSRGFSLLAESFLVDGIGGQGYQITGWMQPDVAIYDRVEVLRG
CCCCCEEEEECCCCEEEECCCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCC
ASGLLVGAGQPGGAVNLVRKRPTADNKFSITTRAGSWDQYRVDLDGSGKLNDSGTLRGRM
CCCEEEECCCCCCEEEEEECCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCEEE
VAAYDDSGSYLDGRDSRTPLLYGIVEADLSDDTTLTMSLRRQEQVINGYSIYGLPRYSNG
EEEECCCCCEECCCCCCCCEEEEEEECCCCCCCEEEEEEHHHHHHHCCEEEEECCCCCCC
QSLGLSRSTNLAQKWNRHESDMTEVFTEVAHRFNEDWTSRTSLTYSQGGFDQNIAFARGA
CCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHCCC
VNPVTLAGSNFQGTLFRKDEVDSVGLNSQLEGNFNAFGLEHQVTLGADWSKQEANTHQVT
CCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEE
LTRRTAINIFDVDQNAFAKPARPAWQTDIDTTEERAGLYANTRIHLSEPLSVVLGTRLSW
EEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCEEEEEEEEECCCHHHHHCCEEEE
YDYKYDVKTGLAKDYESKQTQEFTPFAGVIYDINNSWSWYASYADIFTPQANYVTAGGSP
EEEEEEHHHCCHHCCCCCCCCCCCCCEEEEEEECCCCEEEEEHHHHCCCCCCEEECCCCC
LDPAIGSNYETGFKGELFDKRMNLSMALFYIKQKDVAAVDIAAQDNLTTCPTSSDGSCYL
CCCCCCCCCCCCCCCHHHHHHCCCEEEEEEEECCCCEEEEEEECCCCEECCCCCCCCEEE
QDGISRSKGVDVEASGEVLPGLQVFGGYTYNMLRNNGDSDVAYETPKHMLRLNTSYNLPG
ECCCCCCCCCCEECCCCCCCCCHHHCCEEEEEECCCCCCCCEECCCCCEEEECCCCCCCC
AWNRLTLGAGVSADSGYEVPYDKALGVAGRAIWDARASWKLDENWKVSLNAENLFDRKYY
CCCEEEECCCCCCCCCCCCCHHHHHCCCCCEEECCCCCEEECCCCEEEEEHHHHCCCEEE
TTSIATDRSNVYGEPRSYVLTLRGDF
EEEEECCCHHCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8277948 [H]