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The map label for this gene is pbuA [H]

Identifier: 66045201

GI number: 66045201

Start: 2268408

End: 2270819

Strand: Reverse

Name: pbuA [H]

Synonym: Psyr_1961

Alternate gene names: 66045201

Gene position: 2270819-2268408 (Counterclockwise)

Preceding gene: 66045202

Following gene: 66045195

Centisome position: 37.27

GC content: 61.69

Gene sequence:

>2412_bases
ATGCAATCATCCTCCAGCCGTCTGCGCACCGGCCGCGTGAAAACGCTCGGCCTGCGTCTGGGCGGCGTGGGGCTGGTGCT
GGCGTTGAGTGTCCAAGGACAGGCGCTGGCGGAGGAGTTCGAATTCGATATTCCGGCGCAGACGCTGAGCAGTGCCCTGA
AAGAATTGGGCCGCCAGTGCGATCTGCAAATCCTCTACAACCCCGACGACCTGAACGGCAAGCTCAGCAGCCCGGTGCAT
GGCAGGCTGACGCCCGAACAGGTCGTCGCCGACCTGCTGAAAAAAGCCAACGTAGCGCACAGTCTTGAAGACAACACCCT
GACCCTTGGCGCTGCTGCCTCCGCACACACCATGAACCTGGGGCCGGTGGCGATAAAGGGCGACTCGTTCGGCATCACCA
CCGAGGGCAGCGGCTCGTATGCGGCCACTGGCGTGAGTATCAACAAGACCGCTCAGTCGCTGCGCGAAACGCCGCAGTCG
GTTACCGTCATGACCCGCCAGGTGATGGACGACAAAAACCTCACCGGCCTCGACGAGGTGATGGCACAGACGCCCGGCAT
CACCTTTTCCCAACGCAATTTCGGCTCTCATGTCTTCAGTTCGCGGGGCTTCGCGCTGGAGGACGAGAGTTACATCATCG
ATGGCGTGGCTGGCCAGGGTTACAGCGTGACCGGCTGGATGACCCCGGACATGGAAATCTACGACCGCGTCGAAGTGCTG
CGCGGCGCGGCCGGCTTGCTGATCGGCGCGGGCAACCCCGGTGGCGCGGTCAATCTGGTCCGCAAGCGCCCGACCGCCCT
GCCGCAGTTGTCGATCACCACTCGCGCAGGCAGTTGGGACAGCTACCGGGTCGATCTGGATGGCAGCAGCAAACTCAACG
ATTCAGGCAGCATCCGCGGGCGTTTTGTAACGTCCTATGAAGACCGCGGCTATTTCACCGATGGTCTGCAGAAAACCGCA
CCGTTGCTCTACGGCATCCTGGAAACCGACCTGAGCGAAGACACCACCCTGACCCTGGGCGTACGCCATCAGAACGCCGA
CACCCAGGGCTTTTCGATCTTCGGTCTGCCTCGCTACAGCAACGGCAAGGCCATCGACCTGCCGCGTTCGACGTCGCTGG
CCCAGGACTGGAACCGCCACCAGACCCGCACCGACGAAGTGTTCAGCGAACTGGAAACCCGCTTTGACGACAACTGGAGC
GGCACACTGTCTGCCACTCACTCCGATGGCGCTTTCGATCAGAAGGTCGCCTATGCACAGGGCGCTATTGATCCAGCGAC
GCAGAGCGGTTCCCGGCTGGTCAGAACCCTGTTCCGCTCGGACGATATTCATAGCAATGGCATCGACGCGCACCTGGATG
GCCGGTTCGACGCCTTTGGCCTGAGTCACCAGTTGACCGTCGGCGGCAACGGGTCCGAACAGAAACGCGAGTCGCGCTAT
GCCACGGTCAACGCCAATCAACCGCTGGCTATCTTCAGCCCCGACCACGACGCGATTGCCGAACCTCCGCGTCCGGCCTG
GAGCAGCACGGACTACAGCGACAAGCGCTATGGCGTCTACAGCAACCTGCGCCTGAGCCTGACAGAGTCGTTGAGCCTGG
TGATGGGTGGCCGGGTCAGCAGCTATGACTATCAGACCACGTCTGCAGGCGTGACCCGTCGCGCCCAGGAGGACAATCAG
GTCACCCCGTTTGCGGGGGTCATCTACGACCTCAACCGGGACTGGTCGTGGTACGCCAGTTACACGGATATTTTTCTGCC
GCAAAGCGCCTATCGAACCGCATCAGGCACGCTGCTTGATCCGGCCATCGGCGCCAGCCATGAAACCGGAATCAAGGGCG
AGCTGTTCGACAAACGTCTGAATGTGTCACTGGCGCTGTTCTATGTGAAGCAGAAGGATGTGGCCGTCGAGGATGATGCC
AATGCTGGTCAGTGCGTTAGCAATGATGCCTATGGGACCTGCTACCTGAACGGTGATATCCGGCGCAGCAAGGGCATCGA
CATGGAAATCAGCGGCGAGCCGTTACCGGGATTGCAGACCTTGGCCGGCTACACGTTCAACATCACCCGCGGCAGTGACG
GGCAATCGATTTCAGCGGAAACACCCCGGCACATGCTGCGCCTGACCAGCAGCTACACCCTGCCCGGCGCCTGGCGTCGC
TTGACCATCGGCGGCGGGGTCTCGGCGCAGAGCGGCTACTCGGAACACGAGTCGACCCAACCCATCGATAACGCTGGCCG
GGCCATCTGGGATGCGCGGGTTGCGTGGAAAATCGACGAACACTGGACGGTGGCGCTCAACGGTAACAACCTGCTGGATC
GCAAATACTACAAGGCCACCGGCGACATCGACCGCGGCAACTACTACGGCGACCCGCGCAACTACGTCCTGACCCTGCGC
GGTGATTTTTAA

Upstream 100 bases:

>100_bases
GCGCGGAGCGGTTTCGGTTCGTGATACAGCGCTGTGCACGCGACCAGGCTGCCGCAAATGCATTATCCTTCGCCATTGAT
CTCAACGAGCCATCCCTGCC

Downstream 100 bases:

>100_bases
GCGACGCTCGCGCCGCGCACTCAAGAGCGGACGCAGAGCGTCCAGAAAGGCATGTGAACTGACCCCAAAAAGTCGGACGT
TTGACTATCGTTCCCATGCT

Product: TonB-dependent siderophore receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 803; Mature: 803

Protein sequence:

>803_residues
MQSSSSRLRTGRVKTLGLRLGGVGLVLALSVQGQALAEEFEFDIPAQTLSSALKELGRQCDLQILYNPDDLNGKLSSPVH
GRLTPEQVVADLLKKANVAHSLEDNTLTLGAAASAHTMNLGPVAIKGDSFGITTEGSGSYAATGVSINKTAQSLRETPQS
VTVMTRQVMDDKNLTGLDEVMAQTPGITFSQRNFGSHVFSSRGFALEDESYIIDGVAGQGYSVTGWMTPDMEIYDRVEVL
RGAAGLLIGAGNPGGAVNLVRKRPTALPQLSITTRAGSWDSYRVDLDGSSKLNDSGSIRGRFVTSYEDRGYFTDGLQKTA
PLLYGILETDLSEDTTLTLGVRHQNADTQGFSIFGLPRYSNGKAIDLPRSTSLAQDWNRHQTRTDEVFSELETRFDDNWS
GTLSATHSDGAFDQKVAYAQGAIDPATQSGSRLVRTLFRSDDIHSNGIDAHLDGRFDAFGLSHQLTVGGNGSEQKRESRY
ATVNANQPLAIFSPDHDAIAEPPRPAWSSTDYSDKRYGVYSNLRLSLTESLSLVMGGRVSSYDYQTTSAGVTRRAQEDNQ
VTPFAGVIYDLNRDWSWYASYTDIFLPQSAYRTASGTLLDPAIGASHETGIKGELFDKRLNVSLALFYVKQKDVAVEDDA
NAGQCVSNDAYGTCYLNGDIRRSKGIDMEISGEPLPGLQTLAGYTFNITRGSDGQSISAETPRHMLRLTSSYTLPGAWRR
LTIGGGVSAQSGYSEHESTQPIDNAGRAIWDARVAWKIDEHWTVALNGNNLLDRKYYKATGDIDRGNYYGDPRNYVLTLR
GDF

Sequences:

>Translated_803_residues
MQSSSSRLRTGRVKTLGLRLGGVGLVLALSVQGQALAEEFEFDIPAQTLSSALKELGRQCDLQILYNPDDLNGKLSSPVH
GRLTPEQVVADLLKKANVAHSLEDNTLTLGAAASAHTMNLGPVAIKGDSFGITTEGSGSYAATGVSINKTAQSLRETPQS
VTVMTRQVMDDKNLTGLDEVMAQTPGITFSQRNFGSHVFSSRGFALEDESYIIDGVAGQGYSVTGWMTPDMEIYDRVEVL
RGAAGLLIGAGNPGGAVNLVRKRPTALPQLSITTRAGSWDSYRVDLDGSSKLNDSGSIRGRFVTSYEDRGYFTDGLQKTA
PLLYGILETDLSEDTTLTLGVRHQNADTQGFSIFGLPRYSNGKAIDLPRSTSLAQDWNRHQTRTDEVFSELETRFDDNWS
GTLSATHSDGAFDQKVAYAQGAIDPATQSGSRLVRTLFRSDDIHSNGIDAHLDGRFDAFGLSHQLTVGGNGSEQKRESRY
ATVNANQPLAIFSPDHDAIAEPPRPAWSSTDYSDKRYGVYSNLRLSLTESLSLVMGGRVSSYDYQTTSAGVTRRAQEDNQ
VTPFAGVIYDLNRDWSWYASYTDIFLPQSAYRTASGTLLDPAIGASHETGIKGELFDKRLNVSLALFYVKQKDVAVEDDA
NAGQCVSNDAYGTCYLNGDIRRSKGIDMEISGEPLPGLQTLAGYTFNITRGSDGQSISAETPRHMLRLTSSYTLPGAWRR
LTIGGGVSAQSGYSEHESTQPIDNAGRAIWDARVAWKIDEHWTVALNGNNLLDRKYYKATGDIDRGNYYGDPRNYVLTLR
GDF
>Mature_803_residues
MQSSSSRLRTGRVKTLGLRLGGVGLVLALSVQGQALAEEFEFDIPAQTLSSALKELGRQCDLQILYNPDDLNGKLSSPVH
GRLTPEQVVADLLKKANVAHSLEDNTLTLGAAASAHTMNLGPVAIKGDSFGITTEGSGSYAATGVSINKTAQSLRETPQS
VTVMTRQVMDDKNLTGLDEVMAQTPGITFSQRNFGSHVFSSRGFALEDESYIIDGVAGQGYSVTGWMTPDMEIYDRVEVL
RGAAGLLIGAGNPGGAVNLVRKRPTALPQLSITTRAGSWDSYRVDLDGSSKLNDSGSIRGRFVTSYEDRGYFTDGLQKTA
PLLYGILETDLSEDTTLTLGVRHQNADTQGFSIFGLPRYSNGKAIDLPRSTSLAQDWNRHQTRTDEVFSELETRFDDNWS
GTLSATHSDGAFDQKVAYAQGAIDPATQSGSRLVRTLFRSDDIHSNGIDAHLDGRFDAFGLSHQLTVGGNGSEQKRESRY
ATVNANQPLAIFSPDHDAIAEPPRPAWSSTDYSDKRYGVYSNLRLSLTESLSLVMGGRVSSYDYQTTSAGVTRRAQEDNQ
VTPFAGVIYDLNRDWSWYASYTDIFLPQSAYRTASGTLLDPAIGASHETGIKGELFDKRLNVSLALFYVKQKDVAVEDDA
NAGQCVSNDAYGTCYLNGDIRRSKGIDMEISGEPLPGLQTLAGYTFNITRGSDGQSISAETPRHMLRLTSSYTLPGAWRR
LTIGGGVSAQSGYSEHESTQPIDNAGRAIWDARVAWKIDEHWTVALNGNNLLDRKYYKATGDIDRGNYYGDPRNYVLTLR
GDF

Specific function: Specific receptor for the siderophore ferric pseudobactin m114 [H]

COG id: COG4773

COG function: function code P; Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1787344, Length=695, Percent_Identity=31.3669064748201, Blast_Score=306, Evalue=2e-84,
Organism=Escherichia coli, GI1786344, Length=776, Percent_Identity=23.840206185567, Blast_Score=110, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR011662
- InterPro:   IPR000531
- InterPro:   IPR010917
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF07660 STN; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 87366; Mature: 87366

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: PS01156 TONB_DEPENDENT_REC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSSSSRLRTGRVKTLGLRLGGVGLVLALSVQGQALAEEFEFDIPAQTLSSALKELGRQC
CCCCCCCHHCCCEEEEEEEECCEEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHCCCC
DLQILYNPDDLNGKLSSPVHGRLTPEQVVADLLKKANVAHSLEDNTLTLGAAASAHTMNL
CEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHCCCCCEEEEECCCCCEEECC
GPVAIKGDSFGITTEGSGSYAATGVSINKTAQSLRETPQSVTVMTRQVMDDKNLTGLDEV
CCEEEECCCEEEEECCCCCEEEECCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHH
MAQTPGITFSQRNFGSHVFSSRGFALEDESYIIDGVAGQGYSVTGWMTPDMEIYDRVEVL
HHHCCCCEEECCCCCCHHHCCCCCEECCCCEEEEEECCCCEEEEEEECCCHHHHHHHHHH
RGAAGLLIGAGNPGGAVNLVRKRPTALPQLSITTRAGSWDSYRVDLDGSSKLNDSGSIRG
CCCCEEEEECCCCCCEEEEEECCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCCCCE
RFVTSYEDRGYFTDGLQKTAPLLYGILETDLSEDTTLTLGVRHQNADTQGFSIFGLPRYS
EEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCEEEEECCCCC
NGKAIDLPRSTSLAQDWNRHQTRTDEVFSELETRFDDNWSGTLSATHSDGAFDQKVAYAQ
CCCEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHC
GAIDPATQSGSRLVRTLFRSDDIHSNGIDAHLDGRFDAFGLSHQLTVGGNGSEQKRESRY
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEECCCEEEECCCEEEEECCCCCHHHHHCCE
ATVNANQPLAIFSPDHDAIAEPPRPAWSSTDYSDKRYGVYSNLRLSLTESLSLVMGGRVS
EEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCEEEEEHHCCHHHCCCCCC
SYDYQTTSAGVTRRAQEDNQVTPFAGVIYDLNRDWSWYASYTDIFLPQSAYRTASGTLLD
CCCCCCCCCCHHHCCCCCCCCCCCEEEEEECCCCCEEEECEEEEECCCHHHHCCCCCEEC
PAIGASHETGIKGELFDKRLNVSLALFYVKQKDVAVEDDANAGQCVSNDAYGTCYLNGDI
CCCCCCCCCCCCHHHHHHHCCEEEEEEEEECCCEEEECCCCCCCEECCCCCEEEEECCCE
RRSKGIDMEISGEPLPGLQTLAGYTFNITRGSDGQSISAETPRHMLRLTSSYTLPGAWRR
ECCCCCCEEECCCCCCCHHHHCCEEEEEEECCCCCEECCCCCHHHHHHHCCCCCCCCCEE
LTIGGGVSAQSGYSEHESTQPIDNAGRAIWDARVAWKIDEHWTVALNGNNLLDRKYYKAT
EEECCCCCCCCCCCCCCCCCCHHHCCCEEEEEEEEEEECCCEEEEECCCCCCCCEEEECC
GDIDRGNYYGDPRNYVLTLRGDF
CCCCCCCCCCCCCCEEEEEECCC
>Mature Secondary Structure
MQSSSSRLRTGRVKTLGLRLGGVGLVLALSVQGQALAEEFEFDIPAQTLSSALKELGRQC
CCCCCCCHHCCCEEEEEEEECCEEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHCCCC
DLQILYNPDDLNGKLSSPVHGRLTPEQVVADLLKKANVAHSLEDNTLTLGAAASAHTMNL
CEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHCCCCCEEEEECCCCCEEECC
GPVAIKGDSFGITTEGSGSYAATGVSINKTAQSLRETPQSVTVMTRQVMDDKNLTGLDEV
CCEEEECCCEEEEECCCCCEEEECCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHH
MAQTPGITFSQRNFGSHVFSSRGFALEDESYIIDGVAGQGYSVTGWMTPDMEIYDRVEVL
HHHCCCCEEECCCCCCHHHCCCCCEECCCCEEEEEECCCCEEEEEEECCCHHHHHHHHHH
RGAAGLLIGAGNPGGAVNLVRKRPTALPQLSITTRAGSWDSYRVDLDGSSKLNDSGSIRG
CCCCEEEEECCCCCCEEEEEECCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCCCCE
RFVTSYEDRGYFTDGLQKTAPLLYGILETDLSEDTTLTLGVRHQNADTQGFSIFGLPRYS
EEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCEEEEECCCCC
NGKAIDLPRSTSLAQDWNRHQTRTDEVFSELETRFDDNWSGTLSATHSDGAFDQKVAYAQ
CCCEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHC
GAIDPATQSGSRLVRTLFRSDDIHSNGIDAHLDGRFDAFGLSHQLTVGGNGSEQKRESRY
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEECCCEEEECCCEEEEECCCCCHHHHHCCE
ATVNANQPLAIFSPDHDAIAEPPRPAWSSTDYSDKRYGVYSNLRLSLTESLSLVMGGRVS
EEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCEEEEEHHCCHHHCCCCCC
SYDYQTTSAGVTRRAQEDNQVTPFAGVIYDLNRDWSWYASYTDIFLPQSAYRTASGTLLD
CCCCCCCCCCHHHCCCCCCCCCCCEEEEEECCCCCEEEECEEEEECCCHHHHCCCCCEEC
PAIGASHETGIKGELFDKRLNVSLALFYVKQKDVAVEDDANAGQCVSNDAYGTCYLNGDI
CCCCCCCCCCCCHHHHHHHCCEEEEEEEEECCCEEEECCCCCCCEECCCCCEEEEECCCE
RRSKGIDMEISGEPLPGLQTLAGYTFNITRGSDGQSISAETPRHMLRLTSSYTLPGAWRR
ECCCCCCEEECCCCCCCHHHHCCEEEEEEECCCCCEECCCCCHHHHHHHCCCCCCCCCEE
LTIGGGVSAQSGYSEHESTQPIDNAGRAIWDARVAWKIDEHWTVALNGNNLLDRKYYKAT
EEECCCCCCCCCCCCCCCCCCHHHCCCEEEEEEEEEEECCCEEEEECCCCCCCCEEEECC
GDIDRGNYYGDPRNYVLTLRGDF
CCCCCCCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8277948 [H]