Click here to switch to the map view.

The map label for this gene is rhbA [H]

Identifier: 66045186

GI number: 66045186

Start: 2230946

End: 2232358

Strand: Direct

Name: rhbA [H]

Synonym: Psyr_1946

Alternate gene names: 66045186

Gene position: 2230946-2232358 (Clockwise)

Preceding gene: 66045185

Following gene: 66045187

Centisome position: 36.61

GC content: 63.13

Gene sequence:

>1413_bases
ATGTCAGTCGCTACCAGGTTTATCGATGATCAGCCGACACGGGTTGCCCCGGCTGCGGCTGAGACGCTCTACCAGTTCGA
CGAATCGCCACTGCTGGCCCGACAGAGTCGCCAGGAGTCCAACGCACGCAGCTACCCGCGGCGCATACCGCTGGCGCTCA
AACGCGCCAAGGGTATTCACGTCGAGGACGTCGAAGGGCGGCGCTTCATCGATTGCCTGGCAGGCGCGGGCACCCTGGCG
TTGGGGCATAACCATGCGGTGATTATCGAAGCGATCCAGCAAGTGATCGCCGACGAGTTGCCGCTGCATACGCTGGACCT
CACCACGCCGGTCAAGGACCAGTTCGTTCAGGACCTGTTCGGCCTGTTGCCGCCAGCGCTGGCCGATGACGCGAAGATTC
AGTTTTGCGGCCCGACCGGCACCGATGCAGTGGAAGCCGCGTTGAAGCTGGTACGCACCGCTACCGGGCGCAGCACGGTC
TTGTCATTTCAGGGCGGTTATCACGGCATGAGCCAGGGCGCATTGAGCCTGATGGGCAGCCTGGGGCCGAAAAAGCCGCT
GGGTGCCTTGCTCGGCACCGGCGTGCAGTTTCTGCCGTACCCCTATGATTACCGCTGCCCGTTCGGGCTTGGCGGCGAAC
AGGGCGTGCGCGCCAACCTGCATTATCTGGAAAACCTGCTCAATGACCCGGAAGCCGGCGTGCAATTGCCCGCAGCGGTC
ATTCTTGAAGTGGTGCAGGGCGAGGGTGGAGTGATCCCCGCTGATCTGGACTGGCTGCGCGGCGTGCGACGCATCACCGA
AAAGGCCGGCGTGGCGCTGATCGTCGATGAAATCCAGAGCGGTTTCGCACGCACCGGCAAGATGTTTGCCTTCGAGCATG
CCGGGATCATCCCGGACGTGGTGGTCATGTCCAAAGCCATTGGCGGCAGCTTGCCACTGGCGGTGGTGGTCTATCGTTCC
TGGCTGGACACCTGGCTGCCGGGCGCACACGCCGGGACGTTTCGCGGCAATCAGATGGCCATGGCTACCGGTTCTGCCGT
AATGCGCTATCTTCAGGAACACTCTATTTGCGAACACGCGACAGCCATGGGCGCGCGTCTGTCCGGGCATTTGCGTGCCT
TGCAACGTGACTTCCCGCAGCTGGGCGATATTCGCGGGCGCGGGCTGATGCTCGGTGTCGAGCTGGTCGACCCGTCCGGT
GCGCGCGATGCACAGGGTCATCCGCCGCTATTTTCGCGCTTGGCGCCGCTGATCCAGCGTGAATGCCTCAAGCGCGGGCT
GATTCTGGAACTGGGCGGTCGACATGCCAGCGTGGTACGTTTTCTGCCACCGCTGATCATCACCGCCGAGCAGATCGACG
AAGTGGCAGAGATCTTCGGCCGTGCGCTGAACGCCGCTGTCGCCCAGGTTTAA

Upstream 100 bases:

>100_bases
CTCGCTGGCGCGTTTTCCAAGGACCGAACACACACCTGAAGCGGCATGCGCCAACGCTTATGTTTCAGGTCATTCAAGCC
GCGTATTGAGGGTTGCACAG

Downstream 100 bases:

>100_bases
TTTTTCGACGTAGTGATACGTTCAATCCCTATAGCTGCCATGAATTGGCGCGGCAGCCCTGAACACACATGGAGAGCAGC
AATGACTTCAGTATTCGATC

Product: diaminobutyrate--2-oxoglutarate aminotransferase

Products: NA

Alternate protein names: Diaminobutyrate transaminase; L-2,4-diaminobutyrate:2-ketoglutarate 4-aminotransferase; DABA aminotransferase; DABA-AT; L-diaminobutyric acid transaminase [H]

Number of amino acids: Translated: 470; Mature: 469

Protein sequence:

>470_residues
MSVATRFIDDQPTRVAPAAAETLYQFDESPLLARQSRQESNARSYPRRIPLALKRAKGIHVEDVEGRRFIDCLAGAGTLA
LGHNHAVIIEAIQQVIADELPLHTLDLTTPVKDQFVQDLFGLLPPALADDAKIQFCGPTGTDAVEAALKLVRTATGRSTV
LSFQGGYHGMSQGALSLMGSLGPKKPLGALLGTGVQFLPYPYDYRCPFGLGGEQGVRANLHYLENLLNDPEAGVQLPAAV
ILEVVQGEGGVIPADLDWLRGVRRITEKAGVALIVDEIQSGFARTGKMFAFEHAGIIPDVVVMSKAIGGSLPLAVVVYRS
WLDTWLPGAHAGTFRGNQMAMATGSAVMRYLQEHSICEHATAMGARLSGHLRALQRDFPQLGDIRGRGLMLGVELVDPSG
ARDAQGHPPLFSRLAPLIQRECLKRGLILELGGRHASVVRFLPPLIITAEQIDEVAEIFGRALNAAVAQV

Sequences:

>Translated_470_residues
MSVATRFIDDQPTRVAPAAAETLYQFDESPLLARQSRQESNARSYPRRIPLALKRAKGIHVEDVEGRRFIDCLAGAGTLA
LGHNHAVIIEAIQQVIADELPLHTLDLTTPVKDQFVQDLFGLLPPALADDAKIQFCGPTGTDAVEAALKLVRTATGRSTV
LSFQGGYHGMSQGALSLMGSLGPKKPLGALLGTGVQFLPYPYDYRCPFGLGGEQGVRANLHYLENLLNDPEAGVQLPAAV
ILEVVQGEGGVIPADLDWLRGVRRITEKAGVALIVDEIQSGFARTGKMFAFEHAGIIPDVVVMSKAIGGSLPLAVVVYRS
WLDTWLPGAHAGTFRGNQMAMATGSAVMRYLQEHSICEHATAMGARLSGHLRALQRDFPQLGDIRGRGLMLGVELVDPSG
ARDAQGHPPLFSRLAPLIQRECLKRGLILELGGRHASVVRFLPPLIITAEQIDEVAEIFGRALNAAVAQV
>Mature_469_residues
SVATRFIDDQPTRVAPAAAETLYQFDESPLLARQSRQESNARSYPRRIPLALKRAKGIHVEDVEGRRFIDCLAGAGTLAL
GHNHAVIIEAIQQVIADELPLHTLDLTTPVKDQFVQDLFGLLPPALADDAKIQFCGPTGTDAVEAALKLVRTATGRSTVL
SFQGGYHGMSQGALSLMGSLGPKKPLGALLGTGVQFLPYPYDYRCPFGLGGEQGVRANLHYLENLLNDPEAGVQLPAAVI
LEVVQGEGGVIPADLDWLRGVRRITEKAGVALIVDEIQSGFARTGKMFAFEHAGIIPDVVVMSKAIGGSLPLAVVVYRSW
LDTWLPGAHAGTFRGNQMAMATGSAVMRYLQEHSICEHATAMGARLSGHLRALQRDFPQLGDIRGRGLMLGVELVDPSGA
RDAQGHPPLFSRLAPLIQRECLKRGLILELGGRHASVVRFLPPLIITAEQIDEVAEIFGRALNAAVAQV

Specific function: Unknown

COG id: COG0160

COG function: function code E; 4-aminobutyrate aminotransferase and related aminotransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI13994255, Length=434, Percent_Identity=28.5714285714286, Blast_Score=164, Evalue=2e-40,
Organism=Homo sapiens, GI4557809, Length=434, Percent_Identity=28.8018433179723, Blast_Score=149, Evalue=7e-36,
Organism=Homo sapiens, GI24119277, Length=436, Percent_Identity=28.4403669724771, Blast_Score=135, Evalue=1e-31,
Organism=Homo sapiens, GI37574042, Length=437, Percent_Identity=25.629290617849, Blast_Score=123, Evalue=4e-28,
Organism=Homo sapiens, GI226442705, Length=436, Percent_Identity=25.2293577981651, Blast_Score=122, Evalue=1e-27,
Organism=Homo sapiens, GI284507298, Length=338, Percent_Identity=28.9940828402367, Blast_Score=116, Evalue=5e-26,
Organism=Homo sapiens, GI226442709, Length=372, Percent_Identity=26.0752688172043, Blast_Score=113, Evalue=4e-25,
Organism=Homo sapiens, GI188536080, Length=448, Percent_Identity=24.7767857142857, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI38679950, Length=448, Percent_Identity=24.7767857142857, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI38679946, Length=448, Percent_Identity=24.7767857142857, Blast_Score=87, Evalue=3e-17,
Organism=Escherichia coli, GI1787560, Length=415, Percent_Identity=34.6987951807229, Blast_Score=207, Evalue=1e-54,
Organism=Escherichia coli, GI145693181, Length=412, Percent_Identity=32.2815533980583, Blast_Score=196, Evalue=4e-51,
Organism=Escherichia coli, GI1789016, Length=447, Percent_Identity=31.3199105145414, Blast_Score=194, Evalue=9e-51,
Organism=Escherichia coli, GI1789759, Length=421, Percent_Identity=27.0783847980998, Blast_Score=148, Evalue=9e-37,
Organism=Escherichia coli, GI1788044, Length=429, Percent_Identity=26.8065268065268, Blast_Score=137, Evalue=2e-33,
Organism=Escherichia coli, GI1786349, Length=328, Percent_Identity=29.2682926829268, Blast_Score=109, Evalue=4e-25,
Organism=Escherichia coli, GI1786991, Length=422, Percent_Identity=27.2511848341232, Blast_Score=108, Evalue=8e-25,
Organism=Caenorhabditis elegans, GI32564660, Length=420, Percent_Identity=28.8095238095238, Blast_Score=177, Evalue=1e-44,
Organism=Caenorhabditis elegans, GI25144271, Length=471, Percent_Identity=27.6008492569002, Blast_Score=156, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI71992977, Length=471, Percent_Identity=26.7515923566879, Blast_Score=144, Evalue=7e-35,
Organism=Caenorhabditis elegans, GI25144274, Length=268, Percent_Identity=31.3432835820896, Blast_Score=125, Evalue=6e-29,
Organism=Caenorhabditis elegans, GI17541228, Length=472, Percent_Identity=23.728813559322, Blast_Score=85, Evalue=8e-17,
Organism=Saccharomyces cerevisiae, GI6323470, Length=460, Percent_Identity=28.2608695652174, Blast_Score=156, Evalue=7e-39,
Organism=Saccharomyces cerevisiae, GI6324432, Length=442, Percent_Identity=27.6018099547511, Blast_Score=155, Evalue=2e-38,
Organism=Saccharomyces cerevisiae, GI6321456, Length=388, Percent_Identity=26.0309278350515, Blast_Score=90, Evalue=7e-19,
Organism=Drosophila melanogaster, GI161085790, Length=476, Percent_Identity=29.2016806722689, Blast_Score=166, Evalue=3e-41,
Organism=Drosophila melanogaster, GI28574759, Length=455, Percent_Identity=30.1098901098901, Blast_Score=164, Evalue=9e-41,
Organism=Drosophila melanogaster, GI21357415, Length=434, Percent_Identity=26.9585253456221, Blast_Score=140, Evalue=2e-33,
Organism=Drosophila melanogaster, GI21356575, Length=438, Percent_Identity=26.9406392694064, Blast_Score=135, Evalue=5e-32,
Organism=Drosophila melanogaster, GI281366494, Length=397, Percent_Identity=24.1813602015113, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24667139, Length=397, Percent_Identity=24.1813602015113, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24667143, Length=397, Percent_Identity=24.1813602015113, Blast_Score=91, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005814
- InterPro:   IPR004637
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00202 Aminotran_3 [H]

EC number: =2.6.1.76 [H]

Molecular weight: Translated: 50507; Mature: 50376

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: PS00600 AA_TRANSFER_CLASS_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVATRFIDDQPTRVAPAAAETLYQFDESPLLARQSRQESNARSYPRRIPLALKRAKGIH
CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHCCHHHHHHCCCC
VEDVEGRRFIDCLAGAGTLALGHNHAVIIEAIQQVIADELPLHTLDLTTPVKDQFVQDLF
EECCCCCHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHH
GLLPPALADDAKIQFCGPTGTDAVEAALKLVRTATGRSTVLSFQGGYHGMSQGALSLMGS
HHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHC
LGPKKPLGALLGTGVQFLPYPYDYRCPFGLGGEQGVRANLHYLENLLNDPEAGVQLPAAV
CCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHH
ILEVVQGEGGVIPADLDWLRGVRRITEKAGVALIVDEIQSGFARTGKMFAFEHAGIIPDV
HHHHHCCCCCCCCCCHHHHHHHHHHHHHCCEEEEHHHHHHHHHHCCCEEEECCCCCCHHH
VVMSKAIGGSLPLAVVVYRSWLDTWLPGAHAGTFRGNQMAMATGSAVMRYLQEHSICEHA
HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHH
TAMGARLSGHLRALQRDFPQLGDIRGRGLMLGVELVDPSGARDAQGHPPLFSRLAPLIQR
HHHHHHHHHHHHHHHHHCCHHCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHH
ECLKRGLILELGGRHASVVRFLPPLIITAEQIDEVAEIFGRALNAAVAQV
HHHHCCCEEEECCCHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SVATRFIDDQPTRVAPAAAETLYQFDESPLLARQSRQESNARSYPRRIPLALKRAKGIH
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHCCHHHHHHCCCC
VEDVEGRRFIDCLAGAGTLALGHNHAVIIEAIQQVIADELPLHTLDLTTPVKDQFVQDLF
EECCCCCHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHH
GLLPPALADDAKIQFCGPTGTDAVEAALKLVRTATGRSTVLSFQGGYHGMSQGALSLMGS
HHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHC
LGPKKPLGALLGTGVQFLPYPYDYRCPFGLGGEQGVRANLHYLENLLNDPEAGVQLPAAV
CCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHH
ILEVVQGEGGVIPADLDWLRGVRRITEKAGVALIVDEIQSGFARTGKMFAFEHAGIIPDV
HHHHHCCCCCCCCCCHHHHHHHHHHHHHCCEEEEHHHHHHHHHHCCCEEEECCCCCCHHH
VVMSKAIGGSLPLAVVVYRSWLDTWLPGAHAGTFRGNQMAMATGSAVMRYLQEHSICEHA
HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHH
TAMGARLSGHLRALQRDFPQLGDIRGRGLMLGVELVDPSGARDAQGHPPLFSRLAPLIQR
HHHHHHHHHHHHHHHHHCCHHCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHH
ECLKRGLILELGGRHASVVRFLPPLIITAEQIDEVAEIFGRALNAAVAQV
HHHHCCCEEEECCCHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11274118; 11481432 [H]