| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045165
Identifier: 66045165
GI number: 66045165
Start: 2197408
End: 2198067
Strand: Direct
Name: 66045165
Synonym: Psyr_1924
Alternate gene names: NA
Gene position: 2197408-2198067 (Clockwise)
Preceding gene: 66045164
Following gene: 66045166
Centisome position: 36.06
GC content: 52.88
Gene sequence:
>660_bases ATGAACGGATCGACACTGTCCTTTGACGAAGCCACGTCGAAGGATTTCAAAGGTAACGTGTTACTTGCAAACTCTGATAT CGAACTCGCCCTGGTCAAGGCTGTTTGGCAGGAAGTGTACAGCGAGGAGTTAGGTTGGCTGGACGGGGATGACACCGATC CTCGCAATGATCGCTACCATGCCAACTCGGTCTACCTGCTCGCCACTGACGACGAGGGAGCCGCCGTGGGGGTCATGCGC ATGATTGTCGACGGGGACCAAGGTCTGCCCATCGACAATTTTGCCGACATTTCCGGGATACGGGCAACTGCGCAAGGCGC GCTGATCGAATGTGCGCGACTCATGGTTCCGGCCAGGCACCGCGATCAGATATTTTCGGCTTACCCCTACGGTATTTTTG CTGCCTTGGTAAAAGCGGCTTTGCAGTATTGCCTGAAAGAAAAAAACTACGACGTCCTTGCCAATTGTTTTATCGATACA CCTCACACACCGATAAAAGCACTGGCCCACATGGGGTTCCGTGACTTGAACATTCGCTTTCGAGACGAGTTGCATGAAAC GTCAGAGTGTACGGTTCTGCATTTGGACATCAAGGACATGCTGTCGATATTTTACGGGCCCGAGAAAAGCCTGGGGCATT ACATCATGGCGCGAGCGTAG
Upstream 100 bases:
>100_bases GAGTTCGTTGAAGCGCCCGTCGTAGGTGTCATCAGTGCAGTCGCAATGATTGTTTCAATAATGGCAGTTTCCTATACCTA CACGCTATGGAATGCACAAC
Downstream 100 bases:
>100_bases TTTAATTTTTCCGGGCAAGGGAAGCAGGCATGAACCCATCAATGGCTATCTACGAGCGTGAGTCGAATGTGCGTTCTTAT TGTCGCGACTGTGACGTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MNGSTLSFDEATSKDFKGNVLLANSDIELALVKAVWQEVYSEELGWLDGDDTDPRNDRYHANSVYLLATDDEGAAVGVMR MIVDGDQGLPIDNFADISGIRATAQGALIECARLMVPARHRDQIFSAYPYGIFAALVKAALQYCLKEKNYDVLANCFIDT PHTPIKALAHMGFRDLNIRFRDELHETSECTVLHLDIKDMLSIFYGPEKSLGHYIMARA
Sequences:
>Translated_219_residues MNGSTLSFDEATSKDFKGNVLLANSDIELALVKAVWQEVYSEELGWLDGDDTDPRNDRYHANSVYLLATDDEGAAVGVMR MIVDGDQGLPIDNFADISGIRATAQGALIECARLMVPARHRDQIFSAYPYGIFAALVKAALQYCLKEKNYDVLANCFIDT PHTPIKALAHMGFRDLNIRFRDELHETSECTVLHLDIKDMLSIFYGPEKSLGHYIMARA >Mature_219_residues MNGSTLSFDEATSKDFKGNVLLANSDIELALVKAVWQEVYSEELGWLDGDDTDPRNDRYHANSVYLLATDDEGAAVGVMR MIVDGDQGLPIDNFADISGIRATAQGALIECARLMVPARHRDQIFSAYPYGIFAALVKAALQYCLKEKNYDVLANCFIDT PHTPIKALAHMGFRDLNIRFRDELHETSECTVLHLDIKDMLSIFYGPEKSLGHYIMARA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24409; Mature: 24409
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGSTLSFDEATSKDFKGNVLLANSDIELALVKAVWQEVYSEELGWLDGDDTDPRNDRYH CCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE ANSVYLLATDDEGAAVGVMRMIVDGDQGLPIDNFADISGIRATAQGALIECARLMVPARH CCEEEEEEECCCCCHHHHHHHEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCH RDQIFSAYPYGIFAALVKAALQYCLKEKNYDVLANCFIDTPHTPIKALAHMGFRDLNIRF HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHCCCCCCCEEE RDELHETSECTVLHLDIKDMLSIFYGPEKSLGHYIMARA HHHCCCCCCCEEEEECHHHHHHHHCCCCHHCCCEEEECC >Mature Secondary Structure MNGSTLSFDEATSKDFKGNVLLANSDIELALVKAVWQEVYSEELGWLDGDDTDPRNDRYH CCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE ANSVYLLATDDEGAAVGVMRMIVDGDQGLPIDNFADISGIRATAQGALIECARLMVPARH CCEEEEEEECCCCCHHHHHHHEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCH RDQIFSAYPYGIFAALVKAALQYCLKEKNYDVLANCFIDTPHTPIKALAHMGFRDLNIRF HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHCCCCCCCEEE RDELHETSECTVLHLDIKDMLSIFYGPEKSLGHYIMARA HHHCCCCCCCEEEEECHHHHHHHHCCCCHHCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA