| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is phnX [H]
Identifier: 66045150
GI number: 66045150
Start: 2184053
End: 2184661
Strand: Reverse
Name: phnX [H]
Synonym: Psyr_1909
Alternate gene names: 66045150
Gene position: 2184661-2184053 (Counterclockwise)
Preceding gene: 66045152
Following gene: 66045149
Centisome position: 35.85
GC content: 65.35
Gene sequence:
>609_bases ATGCTCGCCCCGGTCCTCACGCCTCTGCCAACCTTCCCTGCCCTGCTGTTCGGCCTTAGCGGCTGCCTGGTGGACTTCGG TGCGCAGGCCGCAAACTCGCGCGCACCCGGCCATGAGCACACGCAGCTCACACCGGGTGCAAAGGCTATTCTGCAGACCC TGCGTGACCAGAGCATGCCGTGCGCCTGGCTCGATGAACTGCCTGAAAACGTGAGCGCTGCACTGGCTGCACCGGTGAGT GACTGGATGATTCCCGCCCCACGCCCGACCGCAGGCTGGCCCGCCCCGGATGCCTGCTGGATGGCATTGATGGCCCTGAA AGTCAGCCACCTGGATGGCTGCGTACTGATCAGCGGCGACCCGCGCCTGTTGCAGTCCGGGCTGAACGCCGGGCTGTGGA CCATTGGCCTGGCATCCTGCGGCCCACTGTGCGGGCTCTCGCCTTCACAATGGCAGGCACTCAGCGATGCCGAACGCGAA CGGCGACGCGCACAGGCCACGCTCAAACTCTACTCGCTGGGAGTGCATTCGGTGATCGACCACCTGGGCGAACTGGAATC CTGCCTGGCCGACATCGCACTGCGTCGCAGCAAAGGCGAAAAACCCTGA
Upstream 100 bases:
>100_bases GGTCTGTCAGCAAAGGGTTCCGGATAAACTCCGTCATCGCACCTTCATCGAAGTGTCACAAAAGATCGGTAGCGTTTCTC GATATTTCAGAGAGATCCTC
Downstream 100 bases:
>100_bases TACACATGCAGCCAGGTGCAGACTGGATTAGTCTTGAGTGAACATGGACCTTTAGCTCTTCGGCGAAGTCCATGAGACAG ACTTATCAATCAAGGAGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphonatase; Phosphonoacetaldehyde phosphonohydrolase [H]
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MLAPVLTPLPTFPALLFGLSGCLVDFGAQAANSRAPGHEHTQLTPGAKAILQTLRDQSMPCAWLDELPENVSAALAAPVS DWMIPAPRPTAGWPAPDACWMALMALKVSHLDGCVLISGDPRLLQSGLNAGLWTIGLASCGPLCGLSPSQWQALSDAERE RRRAQATLKLYSLGVHSVIDHLGELESCLADIALRRSKGEKP
Sequences:
>Translated_202_residues MLAPVLTPLPTFPALLFGLSGCLVDFGAQAANSRAPGHEHTQLTPGAKAILQTLRDQSMPCAWLDELPENVSAALAAPVS DWMIPAPRPTAGWPAPDACWMALMALKVSHLDGCVLISGDPRLLQSGLNAGLWTIGLASCGPLCGLSPSQWQALSDAERE RRRAQATLKLYSLGVHSVIDHLGELESCLADIALRRSKGEKP >Mature_202_residues MLAPVLTPLPTFPALLFGLSGCLVDFGAQAANSRAPGHEHTQLTPGAKAILQTLRDQSMPCAWLDELPENVSAALAAPVS DWMIPAPRPTAGWPAPDACWMALMALKVSHLDGCVLISGDPRLLQSGLNAGLWTIGLASCGPLCGLSPSQWQALSDAERE RRRAQATLKLYSLGVHSVIDHLGELESCLADIALRRSKGEKP
Specific function: Involved in phosphonate degradation [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. PhnX family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006402 - InterPro: IPR006323 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: =3.11.1.1 [H]
Molecular weight: Translated: 21433; Mature: 21433
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAPVLTPLPTFPALLFGLSGCLVDFGAQAANSRAPGHEHTQLTPGAKAILQTLRDQSMP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC CAWLDELPENVSAALAAPVSDWMIPAPRPTAGWPAPDACWMALMALKVSHLDGCVLISGD HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCC PRLLQSGLNAGLWTIGLASCGPLCGLSPSQWQALSDAERERRRAQATLKLYSLGVHSVID HHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLGELESCLADIALRRSKGEKP HHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLAPVLTPLPTFPALLFGLSGCLVDFGAQAANSRAPGHEHTQLTPGAKAILQTLRDQSMP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC CAWLDELPENVSAALAAPVSDWMIPAPRPTAGWPAPDACWMALMALKVSHLDGCVLISGD HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCC PRLLQSGLNAGLWTIGLASCGPLCGLSPSQWQALSDAERERRRAQATLKLYSLGVHSVID HHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLGELESCLADIALRRSKGEKP HHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA