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The map label for this gene is cycA [H]

Identifier: 66045124

GI number: 66045124

Start: 2152766

End: 2153134

Strand: Reverse

Name: cycA [H]

Synonym: Psyr_1880

Alternate gene names: 66045124

Gene position: 2153134-2152766 (Counterclockwise)

Preceding gene: 66045125

Following gene: 66045122

Centisome position: 35.33

GC content: 59.35

Gene sequence:

>369_bases
ATGAAAAAAACCACGTTACTCCTATTGGCACTGACCCTGCCTGCTCTTGCCAAGGGCGCGGGCGATGCGGAGGCCGGGAA
AGCTGTGTTCACCCGCCTCTGCTCGGGTTGCCACAAGATCGGCCCCTCTGCACGCAGCGCATTTGGCCCGCCCCTCAACG
GCATCATTGGTCGTCAGGCGGGGCAACAGGAAGGCTACGTTTACACCGACGCGATGAAGAACTCGGGGCTGGTCTGGACG
CGTGAAGAGTTGCGCACCTATATCAAGGACCCGAGCGCCGTTGTACCTGGCACCCGCATGAAGCTGTGGTGGATGGGTAA
CGATGAGCGAATGGAGGATCTGCTGGAATACCTTGACGCCAACAAGTAG

Upstream 100 bases:

>100_bases
CGAACTGTCGAGCCAGATACCGGCCAGCAAGTGATCCGCCGATAATTGCGCTAAAATCTGCCACTTTTAAGCGCAAGGCA
GAACGCGCTGTGGATTATCG

Downstream 100 bases:

>100_bases
TACGCGGGTAAAGCGAGGTTCGGATATGAATCGCCCCCGGTACTCACCGAGGGCAATCTGTCAGTTACTTGTCCGGCGTG
TAAGGCGGGTAATCGTCCTT

Product: cytochrome c, class I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MKKTTLLLLALTLPALAKGAGDAEAGKAVFTRLCSGCHKIGPSARSAFGPPLNGIIGRQAGQQEGYVYTDAMKNSGLVWT
REELRTYIKDPSAVVPGTRMKLWWMGNDERMEDLLEYLDANK

Sequences:

>Translated_122_residues
MKKTTLLLLALTLPALAKGAGDAEAGKAVFTRLCSGCHKIGPSARSAFGPPLNGIIGRQAGQQEGYVYTDAMKNSGLVWT
REELRTYIKDPSAVVPGTRMKLWWMGNDERMEDLLEYLDANK
>Mature_122_residues
MKKTTLLLLALTLPALAKGAGDAEAGKAVFTRLCSGCHKIGPSARSAFGPPLNGIIGRQAGQQEGYVYTDAMKNSGLVWT
REELRTYIKDPSAVVPGTRMKLWWMGNDERMEDLLEYLDANK

Specific function: Cytochrome c2 is found mainly in purple, non-sulfur, photosynthetic bacteria where it functions as the electron donor to the oxidized bacteriochlorophyll in the photophosphorylation pathway. However, it may also have a role in the respiratory chain and is

COG id: COG3474

COG function: function code C; Cytochrome c2

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c family [H]

Homologues:

Organism=Homo sapiens, GI11128019, Length=98, Percent_Identity=39.7959183673469, Blast_Score=90, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17566554, Length=99, Percent_Identity=40.4040404040404, Blast_Score=91, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17539604, Length=101, Percent_Identity=39.6039603960396, Blast_Score=86, Evalue=3e-18,
Organism=Saccharomyces cerevisiae, GI6322508, Length=99, Percent_Identity=35.3535353535354, Blast_Score=80, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6320796, Length=98, Percent_Identity=34.6938775510204, Blast_Score=79, Evalue=1e-16,
Organism=Drosophila melanogaster, GI17137204, Length=104, Percent_Identity=40.3846153846154, Blast_Score=94, Evalue=2e-20,
Organism=Drosophila melanogaster, GI17137228, Length=101, Percent_Identity=37.6237623762376, Blast_Score=89, Evalue=7e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002327
- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 13344; Mature: 13344

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTTLLLLALTLPALAKGAGDAEAGKAVFTRLCSGCHKIGPSARSAFGPPLNGIIGRQA
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHCCCC
GQQEGYVYTDAMKNSGLVWTREELRTYIKDPSAVVPGTRMKLWWMGNDERMEDLLEYLDA
CCCCCEEEECCCCCCCCEEEHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCC
NK
CC
>Mature Secondary Structure
MKKTTLLLLALTLPALAKGAGDAEAGKAVFTRLCSGCHKIGPSARSAFGPPLNGIIGRQA
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHCCCC
GQQEGYVYTDAMKNSGLVWTREELRTYIKDPSAVVPGTRMKLWWMGNDERMEDLLEYLDA
CCCCCEEEECCCCCCCCEEEHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCC
NK
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1697576; 174109; 7674304 [H]