| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is 66045114
Identifier: 66045114
GI number: 66045114
Start: 2145660
End: 2146619
Strand: Direct
Name: 66045114
Synonym: Psyr_1870
Alternate gene names: NA
Gene position: 2145660-2146619 (Clockwise)
Preceding gene: 66045113
Following gene: 66045115
Centisome position: 35.21
GC content: 60.62
Gene sequence:
>960_bases ATGTTAAGTAGAACTGCCTCTGATCTTTTCTGGATGTCGCGTTACCTGGAGCGAGCGGAGAACCTCGCCCGCATGCTGGA CGTGAGCTATTCGCTGTCGCTGATGCCACAGGACGGGCGGGGCGACGGGCTGGATGAAATAGCCATGCCGTTGCTGATCA CCGGAACGCTGGAAACCTATATCGAGCGTCATGGCGAGCTGCATGCCGAGCGCATGCTGCATTTCTTTGCTCTGGACGCC ACCAACCCGGCCAGCATCTACAGCTGCCTGGGCGCAGCAAGGGTCAGTGCGCATGCCGTGCGCGGCCGCATCACCGCAGA CATGTGGGAGAACATCAACTCCACCTGGCTGGAGATTCGCGGCATCGCCCAGCAGGGGCTGACCCGCTACGGCATGAGCC GTTTCTGCGAATGGGTCAAGGAGCGTTCGCACCTGTTCCGTGGCGCGACCTACGGCACCATCATGCGTAACGATGCGTTC CGCTTCATCCGTCTGGGTACGTTCATCGAGCGCGCCGACAACACCATGCGCATGCTCGATGCCCGCTATGAAATGCTTGA ATTACGCGGGCCACAGGCTAACGCTGCGGCGGACAACTCGGCGGCCGGTTATTACCAGTGGAGTGCCTTGTTGCGCGCAC TGTCTTCGTTCGAGGCTTACACTGAAGTCTATCGGGATGCGCCAGGCGCGCGTCAGGTTGCCGAACTGTTGCTGCTGCGT GCCGACATTCCGCGTTCGCTACGCGCGTGTCTGGAGGAGATGGACGTCATTCTGGCCAGCCTGCCCGGCGTCAACGGTCG ACCTGCGCAGCGCATGGCGGCCGAGATGGACGCGAGATTGCGCTACACCAGCATCGACGAGATTCTGGCTGAAGGCCTGC ACGAGTGGTTGAACGAATTCATTCCGCTGCTGGCTCAACTGGGTGATGCCATTCACACTTCGTACCTGGAGGCTGCATGA
Upstream 100 bases:
>100_bases TACCCGAGTGGCCTTGCGTGAAGGCTCACTGGTGGTCAATTCGTCACAGGGTGGCGGAACCAAAGACACCTGGGTGGTCG AGGATTAAGGATGCCTGCCA
Downstream 100 bases:
>100_bases GACTTTCGATAAGCCATGAGACCACCTATCACTATGATGACCAAGTGCGCTCGAGTATCCAGTATCTGCGTCTGACGCCT CACGACAGTGAACGTCAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MLSRTASDLFWMSRYLERAENLARMLDVSYSLSLMPQDGRGDGLDEIAMPLLITGTLETYIERHGELHAERMLHFFALDA TNPASIYSCLGAARVSAHAVRGRITADMWENINSTWLEIRGIAQQGLTRYGMSRFCEWVKERSHLFRGATYGTIMRNDAF RFIRLGTFIERADNTMRMLDARYEMLELRGPQANAAADNSAAGYYQWSALLRALSSFEAYTEVYRDAPGARQVAELLLLR ADIPRSLRACLEEMDVILASLPGVNGRPAQRMAAEMDARLRYTSIDEILAEGLHEWLNEFIPLLAQLGDAIHTSYLEAA
Sequences:
>Translated_319_residues MLSRTASDLFWMSRYLERAENLARMLDVSYSLSLMPQDGRGDGLDEIAMPLLITGTLETYIERHGELHAERMLHFFALDA TNPASIYSCLGAARVSAHAVRGRITADMWENINSTWLEIRGIAQQGLTRYGMSRFCEWVKERSHLFRGATYGTIMRNDAF RFIRLGTFIERADNTMRMLDARYEMLELRGPQANAAADNSAAGYYQWSALLRALSSFEAYTEVYRDAPGARQVAELLLLR ADIPRSLRACLEEMDVILASLPGVNGRPAQRMAAEMDARLRYTSIDEILAEGLHEWLNEFIPLLAQLGDAIHTSYLEAA >Mature_319_residues MLSRTASDLFWMSRYLERAENLARMLDVSYSLSLMPQDGRGDGLDEIAMPLLITGTLETYIERHGELHAERMLHFFALDA TNPASIYSCLGAARVSAHAVRGRITADMWENINSTWLEIRGIAQQGLTRYGMSRFCEWVKERSHLFRGATYGTIMRNDAF RFIRLGTFIERADNTMRMLDARYEMLELRGPQANAAADNSAAGYYQWSALLRALSSFEAYTEVYRDAPGARQVAELLLLR ADIPRSLRACLEEMDVILASLPGVNGRPAQRMAAEMDARLRYTSIDEILAEGLHEWLNEFIPLLAQLGDAIHTSYLEAA
Specific function: Unknown
COG id: COG2307
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36058; Mature: 36058
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSRTASDLFWMSRYLERAENLARMLDVSYSLSLMPQDGRGDGLDEIAMPLLITGTLETY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHH IERHGELHAERMLHFFALDATNPASIYSCLGAARVSAHAVRGRITADMWENINSTWLEIR HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHH GIAQQGLTRYGMSRFCEWVKERSHLFRGATYGTIMRNDAFRFIRLGTFIERADNTMRMLD HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH ARYEMLELRGPQANAAADNSAAGYYQWSALLRALSSFEAYTEVYRDAPGARQVAELLLLR HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH ADIPRSLRACLEEMDVILASLPGVNGRPAQRMAAEMDARLRYTSIDEILAEGLHEWLNEF HCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IPLLAQLGDAIHTSYLEAA HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLSRTASDLFWMSRYLERAENLARMLDVSYSLSLMPQDGRGDGLDEIAMPLLITGTLETY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHH IERHGELHAERMLHFFALDATNPASIYSCLGAARVSAHAVRGRITADMWENINSTWLEIR HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHH GIAQQGLTRYGMSRFCEWVKERSHLFRGATYGTIMRNDAFRFIRLGTFIERADNTMRMLD HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH ARYEMLELRGPQANAAADNSAAGYYQWSALLRALSSFEAYTEVYRDAPGARQVAELLLLR HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH ADIPRSLRACLEEMDVILASLPGVNGRPAQRMAAEMDARLRYTSIDEILAEGLHEWLNEF HCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IPLLAQLGDAIHTSYLEAA HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA