| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045067
Identifier: 66045067
GI number: 66045067
Start: 2103171
End: 2104856
Strand: Reverse
Name: 66045067
Synonym: Psyr_1823
Alternate gene names: NA
Gene position: 2104856-2103171 (Counterclockwise)
Preceding gene: 66045068
Following gene: 66045065
Centisome position: 34.54
GC content: 62.75
Gene sequence:
>1686_bases ATGAGCGACAGACCAGACGACGAAGAGACCAACGAAAACCCCAGCCGCCGTCGTTTTCTGGGCGGGATGGCTGCCCTGGG TGCAGGTGTCACCCTTAGCAGTTACGTTTCTGCCCACGAGAAGCCGCCTGGCGACAACGAACGGCATCATCACCTTGCCG GACCCGCGCTGGATCGCGCCTTGCGCGAAAATGTGAAAACCATTGTGGTGATCTACGCCGAGAACCGCAGCTTCAATAAC CTGTTCGGCGATTTCCCCGGTGTCGAAAAGCCGCTCTCCTCGCTCAGGCCTTCCGATTACGAGCAGCGCGACCGCGACGG CACGCGCTTGTCCAAACTGCCCCCGGCCTGGGGCGGCGTGCTGCAGGTCGGACCGCAAACCGTCGATGGCGTGACCTATC CGGTGGGCGAGCAATTTCAGCAAGACCTGCCCAACGCGCCGTTCCCGCTCAAGGGGCCAAACGGTGAAGACCTGCCGCTG AGCCTGGTGACCCGCGACCTGTGGCACGTCTTTTACCAGAACCAGATGCAGATCAACGACGGCAAGAACGACCGTTTCGT GGCCTGGGCGGATGCGGGCGGTCTGACCATGGGCAACTACGCACAGACTCAGTACTCGCTGCGCCTGTGGGACGTGGCCG AGGAATTCGTGCTGTGTGACAACTTCTTCCAGGGTGCTTTCGGCGGCTCGTTCCTCAACCACCAGTACCTGATTTCAGCC ACGGCGCCTGTTTACCCGAACGCCGCCGAATCGCCGGCCAAGTCACAAATCGCCACCCTGCAGAGTTTCAACCCGCAGGA CCCGCGCCTCAAACCACTCGACAAGTCGCCGGCCAGCGCCATGGACGGGCCGCCGCAGTTCGGCCCCAGCGCCATCACGC CGGACAACTACGCCGTCAACACCATGGCCCCGCCGTACTGGCCAACCTGGCTGCGTGACCCGCAGAACCCTGATTACTCG AAACCGGATCTGCCCAACGTGCTGGTTCCGCAAAGCCACGAGCACATCGGTGACAAGCTGTCGAAAAGGAATGTCGACTG GGCCTGGTATGCCGGTGCCTGGCAAGTGACGCTGGATGAGTTCAAGGACTCCACCGGGATCCCGAAAATCCCCAACTTTC AATACCATCACCAGCCGTTCAACTACTTCAAGCAGCAGGGTCCGCAGCACCCTGAAGAGCGCAAGAAGCGCCTGCGTGAC GGTGGCCTGGGTGACGAGTCGAGCACCAATCGCTTCCTCGCCGATGCCGAAGCGGGCAAGTTGCCTGCGGTGACCTTCTA CAAGCCCCAGGGCAACCTGAACATGCACGCCGGTTACGCCGACGTGGCTGCGGGTGACCGGCACATCGACCGGGTGATCA AGGTGCTGCGCAAGAGCCCGCAGTGGGACAACATGGTGATCGTCGTCACCGTCGACGAGAACGGCGGCTGGTGGGACCAC GTCGCACCGCCAAAAGGCGACCGCTTTGGTCCTGGCACCCGTGTTCCGGCGCTGGTCATCTCCCCTTTCGCCCGCAAGGG CAAGGTCGACCACACGGTTTACGACACGGCCTCGATCCTGCGCCTGATCACCCGCGTGCATGGCCTGGAAAAGCTCGACG GCCTGAAACGCCGCGACGAGGCCATGATCGCGCGTGGCCAGACGCCAATGGGCGACCTGACCAACGCGCTGCAGTTTCCG GCCTGA
Upstream 100 bases:
>100_bases ACCCTGATCCTTGATCTGCGCTGTCGCAATAGCGTCATATTCCATGGTTACGCTCGCGTGAAATCTTTGGTAACACATTA ACCAGCGCGAGTATTTGGCG
Downstream 100 bases:
>100_bases TTCGATCAGGTCGTCGCGTCGGCTGCTTCAAGCGCAGTCGGACGAGCGGTTTTAACCGGTGGCAGGGACGCCACGTACAC CGTGCGGGACGGGAACGCGA
Product: twin-arginine translocation pathway signal
Products: NA
Alternate protein names: Acid Phosphatase; Phospholipase C; Phosphoesterase Family Protein; Phospholipase C Phosphocholine-Specific; Acid Phosphatase AcpA; Phospholipase C Protein; Acid Phosphatase Protein; Phospholipase; Twin-Arginine Translocation Pathway Signal; Phosphesterase; Non-Hemolytic Phospholipase C; Phosphoesterase Familiy Protein; Membrane Associated Phosphoesterase
Number of amino acids: Translated: 561; Mature: 560
Protein sequence:
>561_residues MSDRPDDEETNENPSRRRFLGGMAALGAGVTLSSYVSAHEKPPGDNERHHHLAGPALDRALRENVKTIVVIYAENRSFNN LFGDFPGVEKPLSSLRPSDYEQRDRDGTRLSKLPPAWGGVLQVGPQTVDGVTYPVGEQFQQDLPNAPFPLKGPNGEDLPL SLVTRDLWHVFYQNQMQINDGKNDRFVAWADAGGLTMGNYAQTQYSLRLWDVAEEFVLCDNFFQGAFGGSFLNHQYLISA TAPVYPNAAESPAKSQIATLQSFNPQDPRLKPLDKSPASAMDGPPQFGPSAITPDNYAVNTMAPPYWPTWLRDPQNPDYS KPDLPNVLVPQSHEHIGDKLSKRNVDWAWYAGAWQVTLDEFKDSTGIPKIPNFQYHHQPFNYFKQQGPQHPEERKKRLRD GGLGDESSTNRFLADAEAGKLPAVTFYKPQGNLNMHAGYADVAAGDRHIDRVIKVLRKSPQWDNMVIVVTVDENGGWWDH VAPPKGDRFGPGTRVPALVISPFARKGKVDHTVYDTASILRLITRVHGLEKLDGLKRRDEAMIARGQTPMGDLTNALQFP A
Sequences:
>Translated_561_residues MSDRPDDEETNENPSRRRFLGGMAALGAGVTLSSYVSAHEKPPGDNERHHHLAGPALDRALRENVKTIVVIYAENRSFNN LFGDFPGVEKPLSSLRPSDYEQRDRDGTRLSKLPPAWGGVLQVGPQTVDGVTYPVGEQFQQDLPNAPFPLKGPNGEDLPL SLVTRDLWHVFYQNQMQINDGKNDRFVAWADAGGLTMGNYAQTQYSLRLWDVAEEFVLCDNFFQGAFGGSFLNHQYLISA TAPVYPNAAESPAKSQIATLQSFNPQDPRLKPLDKSPASAMDGPPQFGPSAITPDNYAVNTMAPPYWPTWLRDPQNPDYS KPDLPNVLVPQSHEHIGDKLSKRNVDWAWYAGAWQVTLDEFKDSTGIPKIPNFQYHHQPFNYFKQQGPQHPEERKKRLRD GGLGDESSTNRFLADAEAGKLPAVTFYKPQGNLNMHAGYADVAAGDRHIDRVIKVLRKSPQWDNMVIVVTVDENGGWWDH VAPPKGDRFGPGTRVPALVISPFARKGKVDHTVYDTASILRLITRVHGLEKLDGLKRRDEAMIARGQTPMGDLTNALQFP A >Mature_560_residues SDRPDDEETNENPSRRRFLGGMAALGAGVTLSSYVSAHEKPPGDNERHHHLAGPALDRALRENVKTIVVIYAENRSFNNL FGDFPGVEKPLSSLRPSDYEQRDRDGTRLSKLPPAWGGVLQVGPQTVDGVTYPVGEQFQQDLPNAPFPLKGPNGEDLPLS LVTRDLWHVFYQNQMQINDGKNDRFVAWADAGGLTMGNYAQTQYSLRLWDVAEEFVLCDNFFQGAFGGSFLNHQYLISAT APVYPNAAESPAKSQIATLQSFNPQDPRLKPLDKSPASAMDGPPQFGPSAITPDNYAVNTMAPPYWPTWLRDPQNPDYSK PDLPNVLVPQSHEHIGDKLSKRNVDWAWYAGAWQVTLDEFKDSTGIPKIPNFQYHHQPFNYFKQQGPQHPEERKKRLRDG GLGDESSTNRFLADAEAGKLPAVTFYKPQGNLNMHAGYADVAAGDRHIDRVIKVLRKSPQWDNMVIVVTVDENGGWWDHV APPKGDRFGPGTRVPALVISPFARKGKVDHTVYDTASILRLITRVHGLEKLDGLKRRDEAMIARGQTPMGDLTNALQFPA
Specific function: Unknown
COG id: COG3511
COG function: function code M; Phospholipase C
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62475; Mature: 62344
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDRPDDEETNENPSRRRFLGGMAALGAGVTLSSYVSAHEKPPGDNERHHHLAGPALDRA CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH LRENVKTIVVIYAENRSFNNLFGDFPGVEKPLSSLRPSDYEQRDRDGTRLSKLPPAWGGV HHCCCEEEEEEEECCCCHHHHHCCCCCHHHHHHHCCCCCHHHHCCCCCHHHCCCCCCCCE LQVGPQTVDGVTYPVGEQFQQDLPNAPFPLKGPNGEDLPLSLVTRDLWHVFYQNQMQIND EEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECC GKNDRFVAWADAGGLTMGNYAQTQYSLRLWDVAEEFVLCDNFFQGAFGGSFLNHQYLISA CCCCCEEEEECCCCCEECCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE TAPVYPNAAESPAKSQIATLQSFNPQDPRLKPLDKSPASAMDGPPQFGPSAITPDNYAVN CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC TMAPPYWPTWLRDPQNPDYSKPDLPNVLVPQSHEHIGDKLSKRNVDWAWYAGAWQVTLDE CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCEEEEEHHH FKDSTGIPKIPNFQYHHQPFNYFKQQGPQHPEERKKRLRDGGLGDESSTNRFLADAEAGK HCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCEEECCCCCC LPAVTFYKPQGNLNMHAGYADVAAGDRHIDRVIKVLRKSPQWDNMVIVVTVDENGGWWDH CCEEEEECCCCCCEEECCCHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEECC VAPPKGDRFGPGTRVPALVISPFARKGKVDHTVYDTASILRLITRVHGLEKLDGLKRRDE CCCCCCCCCCCCCCCCHHEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMIARGQTPMGDLTNALQFPA HHHHCCCCCHHHHHHHHCCCC >Mature Secondary Structure SDRPDDEETNENPSRRRFLGGMAALGAGVTLSSYVSAHEKPPGDNERHHHLAGPALDRA CCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH LRENVKTIVVIYAENRSFNNLFGDFPGVEKPLSSLRPSDYEQRDRDGTRLSKLPPAWGGV HHCCCEEEEEEEECCCCHHHHHCCCCCHHHHHHHCCCCCHHHHCCCCCHHHCCCCCCCCE LQVGPQTVDGVTYPVGEQFQQDLPNAPFPLKGPNGEDLPLSLVTRDLWHVFYQNQMQIND EEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECC GKNDRFVAWADAGGLTMGNYAQTQYSLRLWDVAEEFVLCDNFFQGAFGGSFLNHQYLISA CCCCCEEEEECCCCCEECCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE TAPVYPNAAESPAKSQIATLQSFNPQDPRLKPLDKSPASAMDGPPQFGPSAITPDNYAVN CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC TMAPPYWPTWLRDPQNPDYSKPDLPNVLVPQSHEHIGDKLSKRNVDWAWYAGAWQVTLDE CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCEEEEEHHH FKDSTGIPKIPNFQYHHQPFNYFKQQGPQHPEERKKRLRDGGLGDESSTNRFLADAEAGK HCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCEEECCCCCC LPAVTFYKPQGNLNMHAGYADVAAGDRHIDRVIKVLRKSPQWDNMVIVVTVDENGGWWDH CCEEEEECCCCCCEEECCCHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEECC VAPPKGDRFGPGTRVPALVISPFARKGKVDHTVYDTASILRLITRVHGLEKLDGLKRRDE CCCCCCCCCCCCCCCCHHEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMIARGQTPMGDLTNALQFPA HHHHCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA