| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045064
Identifier: 66045064
GI number: 66045064
Start: 2099672
End: 2100838
Strand: Direct
Name: 66045064
Synonym: Psyr_1820
Alternate gene names: NA
Gene position: 2099672-2100838 (Clockwise)
Preceding gene: 66045063
Following gene: 66045066
Centisome position: 34.46
GC content: 60.33
Gene sequence:
>1167_bases ATGTATCGCTTTTTCGAGCAACTGAGTTCACGCATCACCGCCCCATTTGTCGGCGAATCCAAACGTAACAGCAAGGTCTG GCAGTGCACCTGTGGCCAGTCGGTGTTTTTCCCCAATACCCAATGCCTGGCCTGTTCGGCAGCGCTGGGCTACCTGCCTG AGCAGGGACGCGTCGCTACCCTCGAAGCAGGGCCTGAGCCCACTACCTGGCGCTTGAGCGATGAGCCGGGTGCCGGGCTG TATCGGCGTTGCGCCAACCTCGGCACTCCGGCAGCCTGTAACTGGCTTTTTCCAGAGCACAATGCCGGCGAATTCTGTGT CGCGTGCAGCCTCAATCACACCATTCCCGACCTGTCCGTGGTTGAAAACGGCGAGCGCTGGCGCAAGGTCGAGACCGCCA AACGGCGTCTGGTCGCACAGCTGATTTCCCTGGGCCTGCAGGTCATCCCCAAGACTGTCGACGAAGAAACCGGCCTGGCC TTCGATTTTGTCGGTGTCGATCTGGAAGGCAACCTGCCAACCACAGGCCATGCCAACGGCCTGATCACCCTGAACATCGA AGAAGCCGACGACGCACACCGCGAAGCGATGCGTGTACAGATGCACGAACCCTATCGCACCTTGCTCGGCCATTTCCGTC ATGAAGTCGGTCATTACTACTGGGATCGGCTCATCGCCAATACCCACTGGCAGGACAGCTATCGCAACCTGTTCGGCGAC GAGCGCGCCAGCTATGCCGACGCGCTCGATCACCACTACAAGAACGGCGCGCCGGACAACTGGCAGGAAAGCTTCGTCAG TGCCTACGCGACCATGCATCCGTGGGAAGACTGGGCCGAAACCTGGGCGCATTACCTGCACATGATGGATGCGGTCGACA CCGCGCTGGGGTTTGGCATGAGCGCTCGCGACATGGAGCTCGATTACCAGCCGTTTCCGCTGGAAGTGCTCTACGACCCT CAGCATCCGGGCGGCCCGGCGTTCCTGTCGTTCGTCAATGCCTGGATCGAGCTGGCGAGCATGCTCAACGAGCTGTCACG CAGCATGGGGCAGCCGGATTTCTATCCGTTCGTGCTGCCTCCAGCAGTCATCGCCAAGCTGCACTTCATCCATCTGGTGA TTCAGGATGCCGGTGGCAAGGCCGATGAGGTTCTGCAGGCCCAGTAA
Upstream 100 bases:
>100_bases AACACGCCGTCAGCCTCATCATCCATGCCGCTCGATAATATTTTTGAACCCCTGAAGCGTCGGCATGATCTAGTCCATGC AAGGTCAACGGGAGATCGCC
Downstream 100 bases:
>100_bases CGCGGGTCGTGCCTGACACGCTTCGGCGGCGTGTCAGGCGTTTGTTCAAAAACGGTTCAAAGCGTCAGGGTCAGTCTGCG CTCGAAGCCGATGCGCCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MYRFFEQLSSRITAPFVGESKRNSKVWQCTCGQSVFFPNTQCLACSAALGYLPEQGRVATLEAGPEPTTWRLSDEPGAGL YRRCANLGTPAACNWLFPEHNAGEFCVACSLNHTIPDLSVVENGERWRKVETAKRRLVAQLISLGLQVIPKTVDEETGLA FDFVGVDLEGNLPTTGHANGLITLNIEEADDAHREAMRVQMHEPYRTLLGHFRHEVGHYYWDRLIANTHWQDSYRNLFGD ERASYADALDHHYKNGAPDNWQESFVSAYATMHPWEDWAETWAHYLHMMDAVDTALGFGMSARDMELDYQPFPLEVLYDP QHPGGPAFLSFVNAWIELASMLNELSRSMGQPDFYPFVLPPAVIAKLHFIHLVIQDAGGKADEVLQAQ
Sequences:
>Translated_388_residues MYRFFEQLSSRITAPFVGESKRNSKVWQCTCGQSVFFPNTQCLACSAALGYLPEQGRVATLEAGPEPTTWRLSDEPGAGL YRRCANLGTPAACNWLFPEHNAGEFCVACSLNHTIPDLSVVENGERWRKVETAKRRLVAQLISLGLQVIPKTVDEETGLA FDFVGVDLEGNLPTTGHANGLITLNIEEADDAHREAMRVQMHEPYRTLLGHFRHEVGHYYWDRLIANTHWQDSYRNLFGD ERASYADALDHHYKNGAPDNWQESFVSAYATMHPWEDWAETWAHYLHMMDAVDTALGFGMSARDMELDYQPFPLEVLYDP QHPGGPAFLSFVNAWIELASMLNELSRSMGQPDFYPFVLPPAVIAKLHFIHLVIQDAGGKADEVLQAQ >Mature_388_residues MYRFFEQLSSRITAPFVGESKRNSKVWQCTCGQSVFFPNTQCLACSAALGYLPEQGRVATLEAGPEPTTWRLSDEPGAGL YRRCANLGTPAACNWLFPEHNAGEFCVACSLNHTIPDLSVVENGERWRKVETAKRRLVAQLISLGLQVIPKTVDEETGLA FDFVGVDLEGNLPTTGHANGLITLNIEEADDAHREAMRVQMHEPYRTLLGHFRHEVGHYYWDRLIANTHWQDSYRNLFGD ERASYADALDHHYKNGAPDNWQESFVSAYATMHPWEDWAETWAHYLHMMDAVDTALGFGMSARDMELDYQPFPLEVLYDP QHPGGPAFLSFVNAWIELASMLNELSRSMGQPDFYPFVLPPAVIAKLHFIHLVIQDAGGKADEVLQAQ
Specific function: Unknown
COG id: COG4307
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011201 [H]
Pfam domain/function: PF10005 DUF2248 [H]
EC number: NA
Molecular weight: Translated: 43735; Mature: 43735
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRFFEQLSSRITAPFVGESKRNSKVWQCTCGQSVFFPNTQCLACSAALGYLPEQGRVAT CCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEECCCCHHHHHHHHHCCCCCCCCEEE LEAGPEPTTWRLSDEPGAGLYRRCANLGTPAACNWLFPEHNAGEFCVACSLNHTIPDLSV EECCCCCCEEEECCCCCCHHHHHHHCCCCCCEEECCCCCCCCCCEEEEEECCCCCCCCHH VENGERWRKVETAKRRLVAQLISLGLQVIPKTVDEETGLAFDFVGVDLEGNLPTTGHANG HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCC LITLNIEEADDAHREAMRVQMHEPYRTLLGHFRHEVGHYYWDRLIANTHWQDSYRNLFGD EEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC ERASYADALDHHYKNGAPDNWQESFVSAYATMHPWEDWAETWAHYLHMMDAVDTALGFGM HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC SARDMELDYQPFPLEVLYDPQHPGGPAFLSFVNAWIELASMLNELSRSMGQPDFYPFVLP CCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECC PAVIAKLHFIHLVIQDAGGKADEVLQAQ HHHHHHHHHHHHEEECCCCCHHHHHCCC >Mature Secondary Structure MYRFFEQLSSRITAPFVGESKRNSKVWQCTCGQSVFFPNTQCLACSAALGYLPEQGRVAT CCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEECCCCHHHHHHHHHCCCCCCCCEEE LEAGPEPTTWRLSDEPGAGLYRRCANLGTPAACNWLFPEHNAGEFCVACSLNHTIPDLSV EECCCCCCEEEECCCCCCHHHHHHHCCCCCCEEECCCCCCCCCCEEEEEECCCCCCCCHH VENGERWRKVETAKRRLVAQLISLGLQVIPKTVDEETGLAFDFVGVDLEGNLPTTGHANG HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCC LITLNIEEADDAHREAMRVQMHEPYRTLLGHFRHEVGHYYWDRLIANTHWQDSYRNLFGD EEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC ERASYADALDHHYKNGAPDNWQESFVSAYATMHPWEDWAETWAHYLHMMDAVDTALGFGM HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC SARDMELDYQPFPLEVLYDPQHPGGPAFLSFVNAWIELASMLNELSRSMGQPDFYPFVLP CCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECC PAVIAKLHFIHLVIQDAGGKADEVLQAQ HHHHHHHHHHHHEEECCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]