| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045041
Identifier: 66045041
GI number: 66045041
Start: 2069244
End: 2070371
Strand: Direct
Name: 66045041
Synonym: Psyr_1797
Alternate gene names: NA
Gene position: 2069244-2070371 (Clockwise)
Preceding gene: 66045039
Following gene: 66045042
Centisome position: 33.96
GC content: 62.59
Gene sequence:
>1128_bases ATGGCATTTCGCGTATTGGTCATCGGTGGCTACGGTAACTTCGGCAGCCTCATCTGTAATCATCTGGTGATGATGCCGCA CATCGATCTGGTCATTTCCGGTCGTGACCCGCGCAAGCTGGCGGAAAAGGTCGCCGCACTGCAAACGCTGGGGGGCAGGT TCTGCGAGAGCTGGTGCGTGGACATCCTGCAGGACGGCGCGGGCACTGAGCTGGGTGAATTGGGCATTGATCTGCTTATT CACACCGCGGGGCCTTTTCAGGGGCAGTCGTATGCCGTGGCCCGGCATTGCATCGAGGCGGGCGTGAATTATTGCGACCT GGCCGATTGCCGGGCGTTTGTCGCCGGTATCGCTACCCTCGATGCCCAGGCGCGTGAGGCAGGTGTCAGCGTGCTGAGCG GGTGCAGCTCGGTGCCGACGCTTTCGGCGGCCATCATCGATCAGCATCGGCAGCGTTTTCTGCGTATCGATTCGATAGAG CATGGCATCTCCTCGGCAGCGAAAATGCCCGGTCTGTCGACTGTACGCGGCGTGCTGGCCAATGCCGGACGACCGATCAG GCAACTGCGCAACGGCAAGATCCACGACGTTTACGGCTGGATGGGCCTGACCCTACGCCGGATGCACGGCATGGGCACGC GGCTGGTGGCCAATGTCGACGTCCCGGACCTGGATGTATTCGCGACACGCTACGCCGCGCAGAACCTGAGCTTCAAGGCC GGTTCCGCGCTCAAGGCCGGCGGCATCGCGACCTGGCTGCTGGCGCTGGCGATTCGCTGCGGGCTGCTGCGCGATCCTGC GCCGTGGGCCGAGCGCCTGTACCGTTGGGGCGCGCGCTTTGAACACTGGGGTGATCGAAAGAGCGCGATGTACATCGATG TCGATGGCCTCGACCTCGGCGGCCAGCCGTTGCACATGCGTGCGCAATTGACTGCACTGAACGACAAGGGGCCGGAGATT CCCGGCAGTGCCGCCGTCGCGCTGAGCAGCAAAATGGCCGATGGCTATCGTCCACAACCGGGCGCTCGGGCCTGCGTCGG AGAAATCACCGTGGACGAGTACCTGGCGGCAATCGATGAGCCGGAAAACATCCGGCTGGATATTCATTTCAAGAACCATA ACGTCTGA
Upstream 100 bases:
>100_bases CAATGATCAATAATGCACGCGCATTTCATCGCCATTGCTCACGGTAATCGTGACGCAACCAGGCAGGGTCATATCCTTTT GGCAGGTCAGGGACGAGTCA
Downstream 100 bases:
>100_bases CACTGCTGCAGATGTCCGATGGCTCCGTACAGGCTGCTGATGTGGCTTTTTAGTGGCACTTTTTTGCTGCTTTCTGCGGC ACCAATCATCGGAAAATTCT
Product: hypothetical protein
Products: NA
Alternate protein names: Saccharopine Dehydrogenase Domain Protein; Potassium Efflux System Protein; Secreted Protein
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MAFRVLVIGGYGNFGSLICNHLVMMPHIDLVISGRDPRKLAEKVAALQTLGGRFCESWCVDILQDGAGTELGELGIDLLI HTAGPFQGQSYAVARHCIEAGVNYCDLADCRAFVAGIATLDAQAREAGVSVLSGCSSVPTLSAAIIDQHRQRFLRIDSIE HGISSAAKMPGLSTVRGVLANAGRPIRQLRNGKIHDVYGWMGLTLRRMHGMGTRLVANVDVPDLDVFATRYAAQNLSFKA GSALKAGGIATWLLALAIRCGLLRDPAPWAERLYRWGARFEHWGDRKSAMYIDVDGLDLGGQPLHMRAQLTALNDKGPEI PGSAAVALSSKMADGYRPQPGARACVGEITVDEYLAAIDEPENIRLDIHFKNHNV
Sequences:
>Translated_375_residues MAFRVLVIGGYGNFGSLICNHLVMMPHIDLVISGRDPRKLAEKVAALQTLGGRFCESWCVDILQDGAGTELGELGIDLLI HTAGPFQGQSYAVARHCIEAGVNYCDLADCRAFVAGIATLDAQAREAGVSVLSGCSSVPTLSAAIIDQHRQRFLRIDSIE HGISSAAKMPGLSTVRGVLANAGRPIRQLRNGKIHDVYGWMGLTLRRMHGMGTRLVANVDVPDLDVFATRYAAQNLSFKA GSALKAGGIATWLLALAIRCGLLRDPAPWAERLYRWGARFEHWGDRKSAMYIDVDGLDLGGQPLHMRAQLTALNDKGPEI PGSAAVALSSKMADGYRPQPGARACVGEITVDEYLAAIDEPENIRLDIHFKNHNV >Mature_374_residues AFRVLVIGGYGNFGSLICNHLVMMPHIDLVISGRDPRKLAEKVAALQTLGGRFCESWCVDILQDGAGTELGELGIDLLIH TAGPFQGQSYAVARHCIEAGVNYCDLADCRAFVAGIATLDAQAREAGVSVLSGCSSVPTLSAAIIDQHRQRFLRIDSIEH GISSAAKMPGLSTVRGVLANAGRPIRQLRNGKIHDVYGWMGLTLRRMHGMGTRLVANVDVPDLDVFATRYAAQNLSFKAG SALKAGGIATWLLALAIRCGLLRDPAPWAERLYRWGARFEHWGDRKSAMYIDVDGLDLGGQPLHMRAQLTALNDKGPEIP GSAAVALSSKMADGYRPQPGARACVGEITVDEYLAAIDEPENIRLDIHFKNHNV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40477; Mature: 40346
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFRVLVIGGYGNFGSLICNHLVMMPHIDLVISGRDPRKLAEKVAALQTLGGRFCESWCV CEEEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH DILQDGAGTELGELGIDLLIHTAGPFQGQSYAVARHCIEAGVNYCDLADCRAFVAGIATL HHHHCCCCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH DAQAREAGVSVLSGCSSVPTLSAAIIDQHRQRFLRIDSIEHGISSAAKMPGLSTVRGVLA HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH NAGRPIRQLRNGKIHDVYGWMGLTLRRMHGMGTRLVANVDVPDLDVFATRYAAQNLSFKA HCCHHHHHHCCCCEEEEHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCC GSALKAGGIATWLLALAIRCGLLRDPAPWAERLYRWGARFEHWGDRKSAMYIDVDGLDLG CCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHCCCCCCEEEEEECCCCCC GQPLHMRAQLTALNDKGPEIPGSAAVALSSKMADGYRPQPGARACVGEITVDEYLAAIDE CCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHCCCCCHHHHHHHCCC PENIRLDIHFKNHNV CCCEEEEEEECCCCC >Mature Secondary Structure AFRVLVIGGYGNFGSLICNHLVMMPHIDLVISGRDPRKLAEKVAALQTLGGRFCESWCV EEEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH DILQDGAGTELGELGIDLLIHTAGPFQGQSYAVARHCIEAGVNYCDLADCRAFVAGIATL HHHHCCCCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH DAQAREAGVSVLSGCSSVPTLSAAIIDQHRQRFLRIDSIEHGISSAAKMPGLSTVRGVLA HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH NAGRPIRQLRNGKIHDVYGWMGLTLRRMHGMGTRLVANVDVPDLDVFATRYAAQNLSFKA HCCHHHHHHCCCCEEEEHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCC GSALKAGGIATWLLALAIRCGLLRDPAPWAERLYRWGARFEHWGDRKSAMYIDVDGLDLG CCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHCCCCCCEEEEEECCCCCC GQPLHMRAQLTALNDKGPEIPGSAAVALSSKMADGYRPQPGARACVGEITVDEYLAAIDE CCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHCCCCCHHHHHHHCCC PENIRLDIHFKNHNV CCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA