Click here to switch to the map view.

The map label for this gene is 66045031

Identifier: 66045031

GI number: 66045031

Start: 2037906

End: 2039198

Strand: Direct

Name: 66045031

Synonym: Psyr_1787

Alternate gene names: NA

Gene position: 2037906-2039198 (Clockwise)

Preceding gene: 66045030

Following gene: 66045032

Centisome position: 33.44

GC content: 61.72

Gene sequence:

>1293_bases
ATGAGAAATATCCACGCATTGACTGCATTGAGCATGGCGCTGCTGCTGAGCGCCTGCGGTGGTGAAGCCGACAGCACTCA
GGCGCGCGGACCGGACCCGAAGCTGCCTGACCCGCAACGCGGCCTGTTGCCGAGCATGAAGATTGCAGAACCCACCGCAT
GGGGCGATCAGAAGCCTGCCGTGCCTGAGGGTTTCAGCATCACGGCAATTGCCAGCGACCTGAATATTCCACGTCAGTCC
ATCGTTTTGCCCAACGGCGACATCATCGTTGCCGAAGGGCGCGGCGGCAGCGCTGCCAAGCTCAAGCCCAAGGACGTGAT
TGCCAGCGTCATCAAGGCCCAGGGCAACACCAAGGTCAAAAGCGGTAATCGCCTGACGCTATTGCGGGACGCGGATGGCG
ACGGCAAATACGAGCTGAAAACGGTGTTTGCCGAGAACCTGAATGCGCCTTATGGCCTGGCCTTCGCGAACGGCAAGCTG
TACGTGGCCAACCAGGATGCGCTGGTCAGCTTCGATTATCAGGAAGGTCAGACCAAGGCCAGCGGTGAACCGACCAAGGT
CACCGACTTGCCTGCAGCGATCAACCACCACTGGACCAAGTCGCTGACCGTCAGCCCTGATGGCCGTTTCCTGTACGTGG
GCATCGGCTCGAACAGTAACGTGACCGAGCGCGGCATGGAGGTCGAGATCGATCGGGCGATGGTCTGGCAGATCGACGCC
GCCACCGGTGCCCACAAACCTTATGCGACCGGTCTGCGCAACCCGACGGCACTGGCGATTCAGCCGGGCACCGGGCAACT
GTGGACAGTGGTCAACGAGCGTGACGAACTCGGGCCTGATCTGGTTCCGGACTACCTGACCTCGGTGAAGGAGGGCGCGT
TTTACGGCTGGCCTTACAGCTATTGGGGCCAGAATGTCGACACGCGTGCCCAGCCGCAGAATCCGGCCAAAGTCGCTGCG
GCGATCAAGCCTGATTACAGCCTTGGTTCGCACGTCGCCGCACTGGGCGTGTCGTTCTCGATCCCGGCCATGGGCGACAA
GTTTGCCGACGGCGTGTTCGTTGGCGAGCACGGCAGTTGGAACCGCGATAACCCGGTGGGCTACAAGGTGATCTTCGTGC
CGTTCAGCAATGGGCGTCCTGCGGGCGAGCCTGTGGACTTCGCAACCGGTTTCCGCGGAGCTGACGGCAAGACTCGCGGC
CGGCCAGTGGGCGTGACGGTTGATCCGAAAGGCGCACTCATCATCGCTGACGACCTGGCAAACACCGTCTGGAGAGTGAC
CCGCAACAAGTAG

Upstream 100 bases:

>100_bases
CGGTCATGCCGTCGGGCTTGATCCTGTCGGTCATCGTCACCGTTCTGGCCTGCGTTGCGACGTGGACCGGGCTTACTAGC
CTGCGTTCCGGAGGTGCAGA

Downstream 100 bases:

>100_bases
GTCACGATGGCCTGAGGTCGTTGTTGAGTAATCGTTCCCAAGCTCTGCTTGGGAACGCCGTTCTTGACCCAGAGCGTCGG
CACGATAGCCGGTGATTGAT

Product: L-sorbosone dehydrogenase

Products: NA

Alternate protein names: SNDH [H]

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MRNIHALTALSMALLLSACGGEADSTQARGPDPKLPDPQRGLLPSMKIAEPTAWGDQKPAVPEGFSITAIASDLNIPRQS
IVLPNGDIIVAEGRGGSAAKLKPKDVIASVIKAQGNTKVKSGNRLTLLRDADGDGKYELKTVFAENLNAPYGLAFANGKL
YVANQDALVSFDYQEGQTKASGEPTKVTDLPAAINHHWTKSLTVSPDGRFLYVGIGSNSNVTERGMEVEIDRAMVWQIDA
ATGAHKPYATGLRNPTALAIQPGTGQLWTVVNERDELGPDLVPDYLTSVKEGAFYGWPYSYWGQNVDTRAQPQNPAKVAA
AIKPDYSLGSHVAALGVSFSIPAMGDKFADGVFVGEHGSWNRDNPVGYKVIFVPFSNGRPAGEPVDFATGFRGADGKTRG
RPVGVTVDPKGALIIADDLANTVWRVTRNK

Sequences:

>Translated_430_residues
MRNIHALTALSMALLLSACGGEADSTQARGPDPKLPDPQRGLLPSMKIAEPTAWGDQKPAVPEGFSITAIASDLNIPRQS
IVLPNGDIIVAEGRGGSAAKLKPKDVIASVIKAQGNTKVKSGNRLTLLRDADGDGKYELKTVFAENLNAPYGLAFANGKL
YVANQDALVSFDYQEGQTKASGEPTKVTDLPAAINHHWTKSLTVSPDGRFLYVGIGSNSNVTERGMEVEIDRAMVWQIDA
ATGAHKPYATGLRNPTALAIQPGTGQLWTVVNERDELGPDLVPDYLTSVKEGAFYGWPYSYWGQNVDTRAQPQNPAKVAA
AIKPDYSLGSHVAALGVSFSIPAMGDKFADGVFVGEHGSWNRDNPVGYKVIFVPFSNGRPAGEPVDFATGFRGADGKTRG
RPVGVTVDPKGALIIADDLANTVWRVTRNK
>Mature_430_residues
MRNIHALTALSMALLLSACGGEADSTQARGPDPKLPDPQRGLLPSMKIAEPTAWGDQKPAVPEGFSITAIASDLNIPRQS
IVLPNGDIIVAEGRGGSAAKLKPKDVIASVIKAQGNTKVKSGNRLTLLRDADGDGKYELKTVFAENLNAPYGLAFANGKL
YVANQDALVSFDYQEGQTKASGEPTKVTDLPAAINHHWTKSLTVSPDGRFLYVGIGSNSNVTERGMEVEIDRAMVWQIDA
ATGAHKPYATGLRNPTALAIQPGTGQLWTVVNERDELGPDLVPDYLTSVKEGAFYGWPYSYWGQNVDTRAQPQNPAKVAA
AIKPDYSLGSHVAALGVSFSIPAMGDKFADGVFVGEHGSWNRDNPVGYKVIFVPFSNGRPAGEPVDFATGFRGADGKTRG
RPVGVTVDPKGALIIADDLANTVWRVTRNK

Specific function: Converts L-sorbosone into 2-keto-L-gulonic acid (2KGA) [H]

COG id: COG2133

COG function: function code G; Glucose/sorbosone dehydrogenases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.burgdorferi BB024 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: NA

Molecular weight: Translated: 45819; Mature: 45819

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNIHALTALSMALLLSACGGEADSTQARGPDPKLPDPQRGLLPSMKIAEPTAWGDQKPA
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VPEGFSITAIASDLNIPRQSIVLPNGDIIVAEGRGGSAAKLKPKDVIASVIKAQGNTKVK
CCCCEEEEEEECCCCCCHHEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEE
SGNRLTLLRDADGDGKYELKTVFAENLNAPYGLAFANGKLYVANQDALVSFDYQEGQTKA
CCCEEEEEEECCCCCCEEEEEEEHHCCCCCEEEEEECCEEEEECCCEEEEEECCCCCCCC
SGEPTKVTDLPAAINHHWTKSLTVSPDGRFLYVGIGSNSNVTERGMEVEIDRAMVWQIDA
CCCCCEEECCCHHHCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCEEEECEEEEEEEEC
ATGAHKPYATGLRNPTALAIQPGTGQLWTVVNERDELGPDLVPDYLTSVKEGAFYGWPYS
CCCCCCCHHHCCCCCEEEEEECCCCCEEEEECCHHHCCCCHHHHHHHHHHCCCEECCCHH
YWGQNVDTRAQPQNPAKVAAAIKPDYSLGSHVAALGVSFSIPAMGDKFADGVFVGEHGSW
HHCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEHEEEEEECCCCCCHHCCCEEEECCCCC
NRDNPVGYKVIFVPFSNGRPAGEPVDFATGFRGADGKTRGRPVGVTVDPKGALIIADDLA
CCCCCCEEEEEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCEEEEEECCCCCEEEECHHC
NTVWRVTRNK
CHHEEEECCC
>Mature Secondary Structure
MRNIHALTALSMALLLSACGGEADSTQARGPDPKLPDPQRGLLPSMKIAEPTAWGDQKPA
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VPEGFSITAIASDLNIPRQSIVLPNGDIIVAEGRGGSAAKLKPKDVIASVIKAQGNTKVK
CCCCEEEEEEECCCCCCHHEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEE
SGNRLTLLRDADGDGKYELKTVFAENLNAPYGLAFANGKLYVANQDALVSFDYQEGQTKA
CCCEEEEEEECCCCCCEEEEEEEHHCCCCCEEEEEECCEEEEECCCEEEEEECCCCCCCC
SGEPTKVTDLPAAINHHWTKSLTVSPDGRFLYVGIGSNSNVTERGMEVEIDRAMVWQIDA
CCCCCEEECCCHHHCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCEEEECEEEEEEEEC
ATGAHKPYATGLRNPTALAIQPGTGQLWTVVNERDELGPDLVPDYLTSVKEGAFYGWPYS
CCCCCCCHHHCCCCCEEEEEECCCCCEEEEECCHHHCCCCHHHHHHHHHHCCCEECCCHH
YWGQNVDTRAQPQNPAKVAAAIKPDYSLGSHVAALGVSFSIPAMGDKFADGVFVGEHGSW
HHCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEHEEEEEECCCCCCHHCCCEEEECCCCC
NRDNPVGYKVIFVPFSNGRPAGEPVDFATGFRGADGKTRGRPVGVTVDPKGALIIADDLA
CCCCCCEEEEEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCEEEEEECCCCCEEEECHHC
NTVWRVTRNK
CHHEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7574579 [H]