| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is folD1 [H]
Identifier: 66044988
GI number: 66044988
Start: 1980210
End: 1981064
Strand: Reverse
Name: folD1 [H]
Synonym: Psyr_1743
Alternate gene names: 66044988
Gene position: 1981064-1980210 (Counterclockwise)
Preceding gene: 66044989
Following gene: 66044981
Centisome position: 32.51
GC content: 64.09
Gene sequence:
>855_bases ATGACTGCAAAACTAATCGACGGCAAGGCGATCGCCGCCAGCCTGCGCCAGCAGATCGCCAAACGTGTCGCCGAACGTAG CCAGCAAGGTCTGCGTACGCCGGGCCTCGCGGTGATTCTGGTCGGCAGCGACCCCGCCTCCCAAGTCTATGTCTCTCACA AGCGCAAGGACTGCGAGGAAGTCGGCTTTATCTCCCAGGCTTACGACTTGCCCGCTGATACCACTCAGGCAGCACTGACC GATCTGATCGACCGCCTCAATGAAGATGCCGCCGTCGACGGCGTCCTGCTGCAACTGCCCTTGCCCGCGCACCTCGACGC TTCGCTGCTGCTGGAGCGCATTCGCCCGGACAAGGACGTGGACGGCTTCCATCCTTATAACGTGGGTCGCCTCGCTCAAC GCATTCCGCTGCTGCGCCCGTGCACTCCCAAAGGCATCATGACCCTGCTGGAAAGCACCGGTGTCGACCTGTACGGCCTG GATGCCGTCGTCGTCGGCGCATCCAACATCGTCGGCCGCCCGATGGCAATGGAACTGCTGCTGGCGGGCTGCACCGTCAC GGTGACCCATCGTTTCACCAGGGATCTGGCAGGCCACGTGGGTCGTGCCGATCTGGTGGTGGTTGCCGCCGGCAAGCCGG GCCTTGTCAAAGGCGAATGGATCAAGCCGGGCGCGATCGTCATCGACGTCGGCATCAACCGCCAGGAAGACGGCAAGCTG GTAGGCGATGTGGTTTACGAGACCGCCCTGCCCCGCGCTGGCTGGATCACTCCGGTTCCGGGCGGCGTCGGCCCCATGAC CCGCGCCTGCCTGCTGGAAAACACGCTGTACGCGGCAGAAACCCTGCACGACTGA
Upstream 100 bases:
>100_bases AGGAGTTAGCTGAATATGCAAAGCAATCGCCTTTGCCCTCGCGCCATGTCATGAGAGAATGCGCACTCATTTTTTTCCTC TCGATGGTTAATCACGCGTC
Downstream 100 bases:
>100_bases TCAGGCTGTTCTGCTCCCATAAAAAACGGCACCTGAGGTGCCGTTTTTTCATTCCCGAAAAAACTTACTTCCTGGCTGCT TCCCAGCTTTTCAGCAAGTC
Product: bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase
Products: NA
Alternate protein names: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase [H]
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MTAKLIDGKAIAASLRQQIAKRVAERSQQGLRTPGLAVILVGSDPASQVYVSHKRKDCEEVGFISQAYDLPADTTQAALT DLIDRLNEDAAVDGVLLQLPLPAHLDASLLLERIRPDKDVDGFHPYNVGRLAQRIPLLRPCTPKGIMTLLESTGVDLYGL DAVVVGASNIVGRPMAMELLLAGCTVTVTHRFTRDLAGHVGRADLVVVAAGKPGLVKGEWIKPGAIVIDVGINRQEDGKL VGDVVYETALPRAGWITPVPGGVGPMTRACLLENTLYAAETLHD
Sequences:
>Translated_284_residues MTAKLIDGKAIAASLRQQIAKRVAERSQQGLRTPGLAVILVGSDPASQVYVSHKRKDCEEVGFISQAYDLPADTTQAALT DLIDRLNEDAAVDGVLLQLPLPAHLDASLLLERIRPDKDVDGFHPYNVGRLAQRIPLLRPCTPKGIMTLLESTGVDLYGL DAVVVGASNIVGRPMAMELLLAGCTVTVTHRFTRDLAGHVGRADLVVVAAGKPGLVKGEWIKPGAIVIDVGINRQEDGKL VGDVVYETALPRAGWITPVPGGVGPMTRACLLENTLYAAETLHD >Mature_283_residues TAKLIDGKAIAASLRQQIAKRVAERSQQGLRTPGLAVILVGSDPASQVYVSHKRKDCEEVGFISQAYDLPADTTQAALTD LIDRLNEDAAVDGVLLQLPLPAHLDASLLLERIRPDKDVDGFHPYNVGRLAQRIPLLRPCTPKGIMTLLESTGVDLYGLD AVVVGASNIVGRPMAMELLLAGCTVTVTHRFTRDLAGHVGRADLVVVAAGKPGLVKGEWIKPGAIVIDVGINRQEDGKLV GDVVYETALPRAGWITPVPGGVGPMTRACLLENTLYAAETLHD
Specific function: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate [H]
COG id: COG0190
COG function: function code H; 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family [H]
Homologues:
Organism=Homo sapiens, GI222136639, Length=292, Percent_Identity=44.1780821917808, Blast_Score=221, Evalue=5e-58, Organism=Homo sapiens, GI222418558, Length=295, Percent_Identity=43.3898305084746, Blast_Score=219, Evalue=3e-57, Organism=Homo sapiens, GI94721354, Length=295, Percent_Identity=44.0677966101695, Blast_Score=213, Evalue=1e-55, Organism=Homo sapiens, GI36796743, Length=225, Percent_Identity=29.7777777777778, Blast_Score=85, Evalue=6e-17, Organism=Escherichia coli, GI1786741, Length=284, Percent_Identity=67.2535211267606, Blast_Score=401, Evalue=1e-113, Organism=Caenorhabditis elegans, GI17568735, Length=292, Percent_Identity=40.0684931506849, Blast_Score=179, Evalue=1e-45, Organism=Saccharomyces cerevisiae, GI6321643, Length=299, Percent_Identity=44.4816053511706, Blast_Score=236, Evalue=4e-63, Organism=Saccharomyces cerevisiae, GI6319558, Length=285, Percent_Identity=43.5087719298246, Blast_Score=220, Evalue=3e-58, Organism=Saccharomyces cerevisiae, GI6322933, Length=311, Percent_Identity=27.9742765273312, Blast_Score=80, Evalue=3e-16, Organism=Drosophila melanogaster, GI17136818, Length=297, Percent_Identity=47.1380471380471, Blast_Score=243, Evalue=1e-64, Organism=Drosophila melanogaster, GI17136816, Length=297, Percent_Identity=47.1380471380471, Blast_Score=243, Evalue=1e-64, Organism=Drosophila melanogaster, GI62472483, Length=287, Percent_Identity=44.5993031358885, Blast_Score=213, Evalue=1e-55, Organism=Drosophila melanogaster, GI45551871, Length=287, Percent_Identity=44.5993031358885, Blast_Score=213, Evalue=1e-55, Organism=Drosophila melanogaster, GI24645718, Length=287, Percent_Identity=44.5993031358885, Blast_Score=212, Evalue=2e-55, Organism=Drosophila melanogaster, GI17137370, Length=287, Percent_Identity=44.5993031358885, Blast_Score=212, Evalue=2e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000672 - InterPro: IPR020630 - InterPro: IPR020631 [H]
Pfam domain/function: PF00763 THF_DHG_CYH; PF02882 THF_DHG_CYH_C [H]
EC number: =1.5.1.5; =3.5.4.9 [H]
Molecular weight: Translated: 30285; Mature: 30154
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAKLIDGKAIAASLRQQIAKRVAERSQQGLRTPGLAVILVGSDPASQVYVSHKRKDCEE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCHHH VGFISQAYDLPADTTQAALTDLIDRLNEDAAVDGVLLQLPLPAHLDASLLLERIRPDKDV HCCHHHHHCCCCCHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCHHHHHHHHCCCCCC DGFHPYNVGRLAQRIPLLRPCTPKGIMTLLESTGVDLYGLDAVVVGASNIVGRPMAMELL CCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEECCEEEECCHHHCCCHHHHHHH LAGCTVTVTHRFTRDLAGHVGRADLVVVAAGKPGLVKGEWIKPGAIVIDVGINRQEDGKL HHCCEEEEHHHHHHHHHHCCCCCEEEEEECCCCCCEECCEECCCEEEEEECCCCCCCCCH VGDVVYETALPRAGWITPVPGGVGPMTRACLLENTLYAAETLHD HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TAKLIDGKAIAASLRQQIAKRVAERSQQGLRTPGLAVILVGSDPASQVYVSHKRKDCEE CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCHHH VGFISQAYDLPADTTQAALTDLIDRLNEDAAVDGVLLQLPLPAHLDASLLLERIRPDKDV HCCHHHHHCCCCCHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCHHHHHHHHCCCCCC DGFHPYNVGRLAQRIPLLRPCTPKGIMTLLESTGVDLYGLDAVVVGASNIVGRPMAMELL CCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEECCEEEECCHHHCCCHHHHHHH LAGCTVTVTHRFTRDLAGHVGRADLVVVAAGKPGLVKGEWIKPGAIVIDVGINRQEDGKL HHCCEEEEHHHHHHHHHHCCCCCEEEEEECCCCCCEECCEECCCEEEEEECCCCCCCCCH VGDVVYETALPRAGWITPVPGGVGPMTRACLLENTLYAAETLHD HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA