| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66044967
Identifier: 66044967
GI number: 66044967
Start: 1951605
End: 1952351
Strand: Reverse
Name: 66044967
Synonym: Psyr_1722
Alternate gene names: NA
Gene position: 1952351-1951605 (Counterclockwise)
Preceding gene: 66044968
Following gene: 66044966
Centisome position: 32.04
GC content: 64.66
Gene sequence:
>747_bases ATGAACCGCATTTTCGACGCCCACTGCCACATCATCGATCCTGGTTTCCCGCTGATCGCCAATAGCGGTTATCTGCCGGA GCCGTTCGCTGTCAGTGACTACCTTGCGACGGTCCAGCCGCTGGGCGTTCAGGGCGGCGCGGTGGTATCGGGCTCCTTTC AGGGTTTTGATCAGGGCTATCTGCTTCAGGCGCTGCGTCTGCTGGGACCGGGCTTCGTCGGTGTCACGCAATTGCCCGCC AGCGTCACCGATGCGGAACTGGACACCCTGAATGCCGCAGGCGTGCGCGCCTTGCGCTTCAACCTCAAGCGCGGCGGCTC GGAGCAGCTCGACCAGCTGGAGGCCCTGGCCGTGCGTGTCCATGAGCACGCAGGCTGGCACTCCGAGCTGTACATCGACT CGCGGGAACTGGCGCCCATCGAAACACGCCTGCGCAAACTCCCGGCCATCAGCATCGATCATCTGGGGCTGAGTGCCGAA GGGCTGCCCGTGGTCCTGCGCCTTGCCGAGCACGGCGTACGAGTCAAGGCCTGTGGTTTCGGGCGTGTGGACTTTCCGGT GCGCGAGGCCCTCAGGGATATCCACGCCGCCAACCCGAATGCCCTGATGTTCGGCACCGACCTGCCGTCGACCCGCGCAC CCCGCCCTTTCCGGCCCGACGATATCGATCTGTTGATCGACGCACTGGGCGAAAGCGGCGCTCGTCAGGCGCTGTGGGAT AACGCGGCGAGCTTCTATCGACTCTGA
Upstream 100 bases:
>100_bases CGTTACAGATCATTCTCGAAAACGTCGGTGAGTACACCAGCACAATCAGCTGATGGGCAAAAAGCGCTAAAGTGAGCACT TCGCCAAACAGGAGTGTGTC
Downstream 100 bases:
>100_bases CGCCGCGGCTCCGGGAGCCCGAGCCAGTCGTCCTACATGGACACCCATGGATCATGTAGGACAATACCTGCATAAATGAC AGGCACTTCTCTAAATGCAA
Product: amidohydrolase 2
Products: NA
Alternate protein names: 2-Pyrone-4 6-Dicarboxylic Acid Hydrolase; Amidohydrolase; Dicarboxylic Acid Hydrolase; Amidohydrolase Family Protein; 2-Pyrone-4 6-Dicarbaxylate Hydrolase; Metal-Dependent Hydrolase; (2-Pyrone-4 6-)Dicarboxylic Acid Hydrolase; Amidase; 2-Pyrone-4 6-Dicarboxylate Lactonase; 2-Pyrone-4 6-Dicarboxylate Hydrolase; Transcriptional Regulator GntR; Amidohydrolase Family; PDC Hydrolase-Like Protein; Exported Protein
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MNRIFDAHCHIIDPGFPLIANSGYLPEPFAVSDYLATVQPLGVQGGAVVSGSFQGFDQGYLLQALRLLGPGFVGVTQLPA SVTDAELDTLNAAGVRALRFNLKRGGSEQLDQLEALAVRVHEHAGWHSELYIDSRELAPIETRLRKLPAISIDHLGLSAE GLPVVLRLAEHGVRVKACGFGRVDFPVREALRDIHAANPNALMFGTDLPSTRAPRPFRPDDIDLLIDALGESGARQALWD NAASFYRL
Sequences:
>Translated_248_residues MNRIFDAHCHIIDPGFPLIANSGYLPEPFAVSDYLATVQPLGVQGGAVVSGSFQGFDQGYLLQALRLLGPGFVGVTQLPA SVTDAELDTLNAAGVRALRFNLKRGGSEQLDQLEALAVRVHEHAGWHSELYIDSRELAPIETRLRKLPAISIDHLGLSAE GLPVVLRLAEHGVRVKACGFGRVDFPVREALRDIHAANPNALMFGTDLPSTRAPRPFRPDDIDLLIDALGESGARQALWD NAASFYRL >Mature_248_residues MNRIFDAHCHIIDPGFPLIANSGYLPEPFAVSDYLATVQPLGVQGGAVVSGSFQGFDQGYLLQALRLLGPGFVGVTQLPA SVTDAELDTLNAAGVRALRFNLKRGGSEQLDQLEALAVRVHEHAGWHSELYIDSRELAPIETRLRKLPAISIDHLGLSAE GLPVVLRLAEHGVRVKACGFGRVDFPVREALRDIHAANPNALMFGTDLPSTRAPRPFRPDDIDLLIDALGESGARQALWD NAASFYRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26893; Mature: 26893
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRIFDAHCHIIDPGFPLIANSGYLPEPFAVSDYLATVQPLGVQGGAVVSGSFQGFDQGY CCCEECCCEEEECCCCCEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCHHH LLQALRLLGPGFVGVTQLPASVTDAELDTLNAAGVRALRFNLKRGGSEQLDQLEALAVRV HHHHHHHHCCCCCCHHHCCCCCCCCHHHHHCHHHHEEEEEECCCCCHHHHHHHHHHHHHH HEHAGWHSELYIDSRELAPIETRLRKLPAISIDHLGLSAEGLPVVLRLAEHGVRVKACGF HHHCCCCCEEEECCCCCCHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHCCCEEEEECC GRVDFPVREALRDIHAANPNALMFGTDLPSTRAPRPFRPDDIDLLIDALGESGARQALWD CCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHH NAASFYRL CCHHHHCC >Mature Secondary Structure MNRIFDAHCHIIDPGFPLIANSGYLPEPFAVSDYLATVQPLGVQGGAVVSGSFQGFDQGY CCCEECCCEEEECCCCCEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCHHH LLQALRLLGPGFVGVTQLPASVTDAELDTLNAAGVRALRFNLKRGGSEQLDQLEALAVRV HHHHHHHHCCCCCCHHHCCCCCCCCHHHHHCHHHHEEEEEECCCCCHHHHHHHHHHHHHH HEHAGWHSELYIDSRELAPIETRLRKLPAISIDHLGLSAEGLPVVLRLAEHGVRVKACGF HHHCCCCCEEEECCCCCCHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHCCCEEEEECC GRVDFPVREALRDIHAANPNALMFGTDLPSTRAPRPFRPDDIDLLIDALGESGARQALWD CCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHH NAASFYRL CCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA