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The map label for this gene is 66044963

Identifier: 66044963

GI number: 66044963

Start: 1947945

End: 1949003

Strand: Reverse

Name: 66044963

Synonym: Psyr_1718

Alternate gene names: NA

Gene position: 1949003-1947945 (Counterclockwise)

Preceding gene: 66044964

Following gene: 66044962

Centisome position: 31.98

GC content: 64.68

Gene sequence:

>1059_bases
ATGTTTGAGTTCGCCTGGCCGTGGGCTTTCGTGCTGCTGCCATTGCCGTGGCTGATGCGCGCCCTGCTGCCCATGGCCGA
CAGCGGCGAGCCGGCGCTCAAGGTCAGCTTTCTCAGTGAACTCGAAGGCCTGAGCGGTCGCCGCGCCAAAGCCAATCTGC
CGGTCTGGAGACAGCGTGCGCCGTTTCTGTTGATCTGGCTGTTGCTGCTGATCACCACAGCGCGACCGCAGTGGCTGGGC
GAGCCACTGCCGGTCGCCGCCAGTGGCCGCGACCTGCTGGTGGCGGTCGACGTGTCCGGGTCGATGGACTACCCGGACAT
GCAATGGAAAAGCGATGAAGTCAGCCGACTGGTGCTGGTGCAACAACTGCTCGGTGACTTTCTCGAGGGCCGCAAGGGCG
ACAGGGTCGGCCTGATCCTGTTCGGCACCCAGGCGTTTGTCCAGGCGCCACTCACCTATGACCGCCGCACCGTGCGGGTC
TGGCTCGACGAGGCGAGGATAGGCATTGCCGGCAAGAACACTGCGCTGGGCGATGCGATCGGCCTGGCCCTGAAACGTCT
GCGTATGCGTCCGGCCACCAGTCGTGCGCTGGTGCTGGTCACCGACGGCGCCAACAACGCCGGTCAGATCGATCCGGTCA
CCGCTGCACGACTGGCTGCCGAAGAAGGCGTAAAAATCTACGCCATCGGCATCGGCTCGGACCCGGACAAAGACGCGCTG
CAAAGCGTGCTGGGCCTCAACCCCAGCCTTGATCTGGACGAACCGACGCTCAAGGAAATCGCCAGCCTCAGCGGTGGCCA
GTACTTCCGCGCGCGCGATGGCGACCAGCTGGAAAAGATCCGCGCCACCCTCGATGCCTTGGAGCCGGTTGCACAGCAGC
CCACCCAGGCGCGCCCGGCGCAAGCGCTTTATCAATGGCCACTGGCGACAGCCCTGTTGTTGAGTGTGCTGCTGGTGCTG
CGCGAGTTATGGCCGAACAACGCACTGCAACGCCTGCTGGCGGTGGTGCGTTCCATCAACTGGCGCGAGCGCTGCAAAAG
CCTGTGGAGGTCGCGATGA

Upstream 100 bases:

>100_bases
TGGATGATCCTGGTCGAAGGCGCTTACAAGCCCGAGTGCAAACTGGACGACAAGGCCATCACCGGCCTGACTCAGGCGGT
CGATACCTGGATCCGCAAAC

Downstream 100 bases:

>100_bases
TCAGCGGACTCTGGCCGCACTGGTTTCGCCCGGAATGGCTGCTGATCACGCCCTTGCTGGCGCTGCTGATCTGGCGACTC
TGGCACCGGCAGAAACGCGC

Product: von Willebrand factor, type A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MFEFAWPWAFVLLPLPWLMRALLPMADSGEPALKVSFLSELEGLSGRRAKANLPVWRQRAPFLLIWLLLLITTARPQWLG
EPLPVAASGRDLLVAVDVSGSMDYPDMQWKSDEVSRLVLVQQLLGDFLEGRKGDRVGLILFGTQAFVQAPLTYDRRTVRV
WLDEARIGIAGKNTALGDAIGLALKRLRMRPATSRALVLVTDGANNAGQIDPVTAARLAAEEGVKIYAIGIGSDPDKDAL
QSVLGLNPSLDLDEPTLKEIASLSGGQYFRARDGDQLEKIRATLDALEPVAQQPTQARPAQALYQWPLATALLLSVLLVL
RELWPNNALQRLLAVVRSINWRERCKSLWRSR

Sequences:

>Translated_352_residues
MFEFAWPWAFVLLPLPWLMRALLPMADSGEPALKVSFLSELEGLSGRRAKANLPVWRQRAPFLLIWLLLLITTARPQWLG
EPLPVAASGRDLLVAVDVSGSMDYPDMQWKSDEVSRLVLVQQLLGDFLEGRKGDRVGLILFGTQAFVQAPLTYDRRTVRV
WLDEARIGIAGKNTALGDAIGLALKRLRMRPATSRALVLVTDGANNAGQIDPVTAARLAAEEGVKIYAIGIGSDPDKDAL
QSVLGLNPSLDLDEPTLKEIASLSGGQYFRARDGDQLEKIRATLDALEPVAQQPTQARPAQALYQWPLATALLLSVLLVL
RELWPNNALQRLLAVVRSINWRERCKSLWRSR
>Mature_352_residues
MFEFAWPWAFVLLPLPWLMRALLPMADSGEPALKVSFLSELEGLSGRRAKANLPVWRQRAPFLLIWLLLLITTARPQWLG
EPLPVAASGRDLLVAVDVSGSMDYPDMQWKSDEVSRLVLVQQLLGDFLEGRKGDRVGLILFGTQAFVQAPLTYDRRTVRV
WLDEARIGIAGKNTALGDAIGLALKRLRMRPATSRALVLVTDGANNAGQIDPVTAARLAAEEGVKIYAIGIGSDPDKDAL
QSVLGLNPSLDLDEPTLKEIASLSGGQYFRARDGDQLEKIRATLDALEPVAQQPTQARPAQALYQWPLATALLLSVLLVL
RELWPNNALQRLLAVVRSINWRERCKSLWRSR

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 VWFA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002035 [H]

Pfam domain/function: PF00092 VWA [H]

EC number: NA

Molecular weight: Translated: 38982; Mature: 38982

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEFAWPWAFVLLPLPWLMRALLPMADSGEPALKVSFLSELEGLSGRRAKANLPVWRQRA
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHCCCCCCCCCCCCCHHHCCC
PFLLIWLLLLITTARPQWLGEPLPVAASGRDLLVAVDVSGSMDYPDMQWKSDEVSRLVLV
CHHHHHHHHHHHCCCHHHCCCCCCEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHH
QQLLGDFLEGRKGDRVGLILFGTQAFVQAPLTYDRRTVRVWLDEARIGIAGKNTALGDAI
HHHHHHHHCCCCCCEEEEEEECCHHHHHCCCCCCCEEEEEEEECCEEEECCCCCHHHHHH
GLALKRLRMRPATSRALVLVTDGANNAGQIDPVTAARLAAEEGVKIYAIGIGSDPDKDAL
HHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHH
QSVLGLNPSLDLDEPTLKEIASLSGGQYFRARDGDQLEKIRATLDALEPVAQQPTQARPA
HHHHCCCCCCCCCCHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCHH
QALYQWPLATALLLSVLLVLRELWPNNALQRLLAVVRSINWRERCKSLWRSR
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHCCC
>Mature Secondary Structure
MFEFAWPWAFVLLPLPWLMRALLPMADSGEPALKVSFLSELEGLSGRRAKANLPVWRQRA
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHCCCCCCCCCCCCCHHHCCC
PFLLIWLLLLITTARPQWLGEPLPVAASGRDLLVAVDVSGSMDYPDMQWKSDEVSRLVLV
CHHHHHHHHHHHCCCHHHCCCCCCEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHH
QQLLGDFLEGRKGDRVGLILFGTQAFVQAPLTYDRRTVRVWLDEARIGIAGKNTALGDAI
HHHHHHHHCCCCCCEEEEEEECCHHHHHCCCCCCCEEEEEEEECCEEEECCCCCHHHHHH
GLALKRLRMRPATSRALVLVTDGANNAGQIDPVTAARLAAEEGVKIYAIGIGSDPDKDAL
HHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHH
QSVLGLNPSLDLDEPTLKEIASLSGGQYFRARDGDQLEKIRATLDALEPVAQQPTQARPA
HHHHCCCCCCCCCCHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCHH
QALYQWPLATALLLSVLLVLRELWPNNALQRLLAVVRSINWRERCKSLWRSR
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]