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The map label for this gene is 66044962

Identifier: 66044962

GI number: 66044962

Start: 1946230

End: 1947948

Strand: Reverse

Name: 66044962

Synonym: Psyr_1717

Alternate gene names: NA

Gene position: 1947948-1946230 (Counterclockwise)

Preceding gene: 66044963

Following gene: 66044961

Centisome position: 31.97

GC content: 64.63

Gene sequence:

>1719_bases
ATGATCAGCGGACTCTGGCCGCACTGGTTTCGCCCGGAATGGCTGCTGATCACGCCCTTGCTGGCGCTGCTGATCTGGCG
ACTCTGGCACCGGCAGAAACGCGCCGGACGCTGGCAAATGCTGCTGCCCACTCACTTTCATGAGGTGTTGCTCAACGGCG
GGCGCGGCAGCAACAGCAAACTGCCATGGATCGCGCTGGGGCTCGCCTGGTTGCTGGCCCTTTTCGCCTTGCTGGGCCCC
AGTTGGCAGCGCGTCGAACAGATCAGCCAGAAACCGGTCGATCCGTTGGTGGTGATTCTCGAGCTCACCCCGCAGATGCT
CGCCACCGACACGCCGCCTACCCGCCTGGAACAGGCCAGACGCAAGCTGCTGGACCTGTTGCAAAAACGCAGCGATGCAC
AGACCGCCATCGTCGTCTACGCAGGCAGCGCACACACCCTGGTGCCGCTGTCCGATGATCTGGTCACCAGCCACAACCTG
CTGGAAGCCATCAGACCGTCGATCATGCCGGTGACCGGCCAGCGCGCCGATCTGGCCGTGCAGAAAGCGCTGCACCTGCT
CAAACAGGGCGCATTGGGTCAGGGGCGGATTCTGCTGATCACCTCGTCGCTGAGCGAACAGGAACGTCAGGGCATCCGCG
CCGCGTTGCGCGGGCAATCGCCGCCGCTGTTGATTCTCGGGGTCGGCACAGCGGAAGGCGCACCGGTCACGCAGGAAAAC
GGCAGCCTGCTCAAGGATGATCAAGGTGCGATTCTGGTGCCGCGTCTGGACAGTACCAGCCTCAACGACTTCGCCGATCA
GGTGGGTGGCAGCTATCGTCAGGCACGCGGCGATGAAGAAGACTTGCGCAGCCTCGGTCTGCTGGCCAGCCCCCGACACA
TGACCCGCGACGGTCAGGTCGTGCAGCTCGACACTTGGGCTGACCAGGGCCACTGGTTGCTGCTGCCGCTGTTGCTGATC
GCGGCACTGGCCGGCCGGCGCGGCTGGCTGTTCTGCCTGCCGCTGCTGTTCATGTTTCCGCAGAACAGCCAGGCGTTCGA
GTTTCAGGACCTGTGGCTGCGTCCCGACCAACAGGGCCAGCGCCTGCTGGAACAGCATCGGCCGGCCGAGGCCGCGCAGC
GCTTCGAAGACTCGCGCTGGAAAGGCGTGGCGTTGTACCAGGCGCAAGACTACGCCAGCGCCGCCCGGCAGTTTGCCGAA
GGCAATAGCGCCGCCGACCACTACAATCGTGGCAATGCCCTGGCCCGCAGCGGTGAGCTGGCAGCGGCACTGGATGCCTA
CGAGCAGGCCCTGGACCGACAACCCGACTTCCCTGCGGCGCAAACCAATCGGGCACTGGTGCAAGGCCTGCTGGATCAGG
CCGATGAGCAGAAGCCTGCCCAGGATGAACAGAACAAGGCCGATCAGGGCGAAGAAGGTCAACAGGCGTCGCAAGACCCC
AACAGCAGCGCATCACCCGCCGAGCAGAACCCGTCCCGATCGGATCAACCCGGCACCAGCGAAAGCCTGCCGCCAGACAC
CAGTGGTAAGGCCACCTCGGGCGAGTCGACCGACGACGAACAGACCACCCGCCCGCCGCTACAGTCCGCCGACAGCCCCA
TGACCGGCGAGCGGCGTCAGGAACTGGAGCAGTGGCTGAGGCAGATTCCGGATGATCCGGGCGAACTGTTGCGGCGCAAA
TTTCGCTACGAACAGCAACATCAGGAAAAGACCCGATGA

Upstream 100 bases:

>100_bases
TGCTGCGCGAGTTATGGCCGAACAACGCACTGCAACGCCTGCTGGCGGTGGTGCGTTCCATCAACTGGCGCGAGCGCTGC
AAAAGCCTGTGGAGGTCGCG

Downstream 100 bases:

>100_bases
GTCGCGTGTACACCTTATTGATCAGCCTGCTGCTGAGCCTGGTCACCTTGTCGCTGCAGGCTGCGCAACTGACCGCCAGC
GTTGACCGCACGCGCCTCAA

Product: TPR repeat-containing von Willebrand factor, type A

Products: NA

Alternate protein names: Von Willebrand Factor Type A; TPR Domain-Containing Protein; BatB Protein; Tetratricopeptide TPR_2 Repeat Protein; Aerotolerance-Related Membrane Protein; TPR Domain Protein; Von Willebrand Factor Type A Domain-Containing Protein; Transmembrane Protein; TPR Repeat; TPR Domain Protein In Aerotolerance Operon; Von Willebrand Factor Type A Domain Protein; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Protein; Tetratricopeptide Repeat Family; TPR Repeat Protein; Unknwon Proteins; Ssl1 Domain Protein; Batb Protein; Aerotolerance-Related Cytoplasmic Membrane Protein BatB; BatB/BatC Protein; Tetratricopeptide Repeat And VWA Domain-Containing Protein; Tpr Domain Protein; Protein Containing A Von Willebrand Factor Type A Domain

Number of amino acids: Translated: 572; Mature: 572

Protein sequence:

>572_residues
MISGLWPHWFRPEWLLITPLLALLIWRLWHRQKRAGRWQMLLPTHFHEVLLNGGRGSNSKLPWIALGLAWLLALFALLGP
SWQRVEQISQKPVDPLVVILELTPQMLATDTPPTRLEQARRKLLDLLQKRSDAQTAIVVYAGSAHTLVPLSDDLVTSHNL
LEAIRPSIMPVTGQRADLAVQKALHLLKQGALGQGRILLITSSLSEQERQGIRAALRGQSPPLLILGVGTAEGAPVTQEN
GSLLKDDQGAILVPRLDSTSLNDFADQVGGSYRQARGDEEDLRSLGLLASPRHMTRDGQVVQLDTWADQGHWLLLPLLLI
AALAGRRGWLFCLPLLFMFPQNSQAFEFQDLWLRPDQQGQRLLEQHRPAEAAQRFEDSRWKGVALYQAQDYASAARQFAE
GNSAADHYNRGNALARSGELAAALDAYEQALDRQPDFPAAQTNRALVQGLLDQADEQKPAQDEQNKADQGEEGQQASQDP
NSSASPAEQNPSRSDQPGTSESLPPDTSGKATSGESTDDEQTTRPPLQSADSPMTGERRQELEQWLRQIPDDPGELLRRK
FRYEQQHQEKTR

Sequences:

>Translated_572_residues
MISGLWPHWFRPEWLLITPLLALLIWRLWHRQKRAGRWQMLLPTHFHEVLLNGGRGSNSKLPWIALGLAWLLALFALLGP
SWQRVEQISQKPVDPLVVILELTPQMLATDTPPTRLEQARRKLLDLLQKRSDAQTAIVVYAGSAHTLVPLSDDLVTSHNL
LEAIRPSIMPVTGQRADLAVQKALHLLKQGALGQGRILLITSSLSEQERQGIRAALRGQSPPLLILGVGTAEGAPVTQEN
GSLLKDDQGAILVPRLDSTSLNDFADQVGGSYRQARGDEEDLRSLGLLASPRHMTRDGQVVQLDTWADQGHWLLLPLLLI
AALAGRRGWLFCLPLLFMFPQNSQAFEFQDLWLRPDQQGQRLLEQHRPAEAAQRFEDSRWKGVALYQAQDYASAARQFAE
GNSAADHYNRGNALARSGELAAALDAYEQALDRQPDFPAAQTNRALVQGLLDQADEQKPAQDEQNKADQGEEGQQASQDP
NSSASPAEQNPSRSDQPGTSESLPPDTSGKATSGESTDDEQTTRPPLQSADSPMTGERRQELEQWLRQIPDDPGELLRRK
FRYEQQHQEKTR
>Mature_572_residues
MISGLWPHWFRPEWLLITPLLALLIWRLWHRQKRAGRWQMLLPTHFHEVLLNGGRGSNSKLPWIALGLAWLLALFALLGP
SWQRVEQISQKPVDPLVVILELTPQMLATDTPPTRLEQARRKLLDLLQKRSDAQTAIVVYAGSAHTLVPLSDDLVTSHNL
LEAIRPSIMPVTGQRADLAVQKALHLLKQGALGQGRILLITSSLSEQERQGIRAALRGQSPPLLILGVGTAEGAPVTQEN
GSLLKDDQGAILVPRLDSTSLNDFADQVGGSYRQARGDEEDLRSLGLLASPRHMTRDGQVVQLDTWADQGHWLLLPLLLI
AALAGRRGWLFCLPLLFMFPQNSQAFEFQDLWLRPDQQGQRLLEQHRPAEAAQRFEDSRWKGVALYQAQDYASAARQFAE
GNSAADHYNRGNALARSGELAAALDAYEQALDRQPDFPAAQTNRALVQGLLDQADEQKPAQDEQNKADQGEEGQQASQDP
NSSASPAEQNPSRSDQPGTSESLPPDTSGKATSGESTDDEQTTRPPLQSADSPMTGERRQELEQWLRQIPDDPGELLRRK
FRYEQQHQEKTR

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63694; Mature: 63694

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION ; PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISGLWPHWFRPEWLLITPLLALLIWRLWHRQKRAGRWQMLLPTHFHEVLLNGGRGSNSK
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHCCCCCCCCC
LPWIALGLAWLLALFALLGPSWQRVEQISQKPVDPLVVILELTPQMLATDTPPTRLEQAR
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEHHHHCHHHHHCCCCHHHHHHHH
RKLLDLLQKRSDAQTAIVVYAGSAHTLVPLSDDLVTSHNLLEAIRPSIMPVTGQRADLAV
HHHHHHHHHCCCCCEEEEEEECCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
QKALHLLKQGALGQGRILLITSSLSEQERQGIRAALRGQSPPLLILGVGTAEGAPVTQEN
HHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCC
GSLLKDDQGAILVPRLDSTSLNDFADQVGGSYRQARGDEEDLRSLGLLASPRHMTRDGQV
CCEEECCCCCEEEECCCCCCHHHHHHHHCCHHHHHCCCHHHHHHHCCCCCCCCCCCCCCE
VQLDTWADQGHWLLLPLLLIAALAGRRGWLFCLPLLFMFPQNSQAFEFQDLWLRPDQQGQ
EEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEHHHHCCCCCHHHH
RLLEQHRPAEAAQRFEDSRWKGVALYQAQDYASAARQFAEGNSAADHYNRGNALARSGEL
HHHHHCCCHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCHHHHHCCCCHHHCCCCH
AAALDAYEQALDRQPDFPAAQTNRALVQGLLDQADEQKPAQDEQNKADQGEEGQQASQDP
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHCCCC
NSSASPAEQNPSRSDQPGTSESLPPDTSGKATSGESTDDEQTTRPPLQSADSPMTGERRQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHH
ELEQWLRQIPDDPGELLRRKFRYEQQHQEKTR
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MISGLWPHWFRPEWLLITPLLALLIWRLWHRQKRAGRWQMLLPTHFHEVLLNGGRGSNSK
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHCCCCCCCCC
LPWIALGLAWLLALFALLGPSWQRVEQISQKPVDPLVVILELTPQMLATDTPPTRLEQAR
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEHHHHCHHHHHCCCCHHHHHHHH
RKLLDLLQKRSDAQTAIVVYAGSAHTLVPLSDDLVTSHNLLEAIRPSIMPVTGQRADLAV
HHHHHHHHHCCCCCEEEEEEECCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
QKALHLLKQGALGQGRILLITSSLSEQERQGIRAALRGQSPPLLILGVGTAEGAPVTQEN
HHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCC
GSLLKDDQGAILVPRLDSTSLNDFADQVGGSYRQARGDEEDLRSLGLLASPRHMTRDGQV
CCEEECCCCCEEEECCCCCCHHHHHHHHCCHHHHHCCCHHHHHHHCCCCCCCCCCCCCCE
VQLDTWADQGHWLLLPLLLIAALAGRRGWLFCLPLLFMFPQNSQAFEFQDLWLRPDQQGQ
EEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEHHHHCCCCCHHHH
RLLEQHRPAEAAQRFEDSRWKGVALYQAQDYASAARQFAEGNSAADHYNRGNALARSGEL
HHHHHCCCHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCHHHHHCCCCHHHCCCCH
AAALDAYEQALDRQPDFPAAQTNRALVQGLLDQADEQKPAQDEQNKADQGEEGQQASQDP
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHCCCC
NSSASPAEQNPSRSDQPGTSESLPPDTSGKATSGESTDDEQTTRPPLQSADSPMTGERRQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHH
ELEQWLRQIPDDPGELLRRKFRYEQQHQEKTR
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA