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The map label for this gene is ykgB [H]

Identifier: 66044957

GI number: 66044957

Start: 1937665

End: 1938849

Strand: Direct

Name: ykgB [H]

Synonym: Psyr_1712

Alternate gene names: 66044957

Gene position: 1937665-1938849 (Clockwise)

Preceding gene: 66044956

Following gene: 66044958

Centisome position: 31.8

GC content: 58.23

Gene sequence:

>1185_bases
ATGGATGCCCCCATGCCCCATAAATTTCTGCCGTGGCTGGCGATTGCCAGTGCCATGAGCACATTTACCCTGCAGGCCCA
AGCCATGCCAGATACTGAATTGCTGATCGGTTCCTACACGCAAGGCAAGAGTGAAGGGATCTATCGTTTTGCCTTCGACA
GCGAAACCGGAATGATCGGCGCCAAGCCGCTGCAAGTGGTCAAAGCCGAAAACCCGTCGTGGCTGACCGTCTCCAGAGAC
CAGCGCTATCTGTTCGCAGTCAATGAAAACGGCCCCGGACAGAAAGACGTGGTCGGTAAGGTCAGCAGCTTTGCGATCGA
CCCGAAAACCCGTCAGATCACGCCGATCAATCAGGTTCAAAGCCGCGGTGAAGAACCGACGCACTCCAGCCTGAGCTACG
ACGGCCGCTACCTGTTCGTGGCCAACTACGCAGTAAACCCTGACCCGGGCGGCGCGCTGACCGTGGTGCCGGTAGGCAAG
GACGGCACCTTGAGCGAAGCCGTTCAGGTCCTGCCGCTGGGGCCTGGAAGCAAGGTCAACAGTGAGCGGCAGATGTCCTC
ACATGTGCACCTGGCCGTGCCGACGCCGGATGACAAGTACGTAGTGACTGCCGACCTGGGCGCTGACAAGCTGTTCGTTT
ATCACTACGACGCGAGCCAAGCCAAGCCATTGCAGCCAGCCAAGGTGCCGTTCGTGCAGTTGCCGGGCGGCTCCGGACCC
CGTCATACGCTCTTCAGCGCTGATGGCAAGCATGCCTGGCTGGTGCTGGAAATGACGGCTCAGGTCGCGGTGTTCGACTA
CCACGACGGCGTCTTCAAGCAGACCCAACTGGTCGACATGAAGAACAAGGGCGTGGACGAGAAAAACGGTGGTGGCGCCT
TGCACACTTCACCGGATGGCAAATTTCTGTACGTAACCAATCGGGGTGACGCGAATCAGGTCGTGGTGTTCCGCATCGAT
CAGGCCAGCGGCAAGCTTGAAGAAATTCAGCGTCGTTCCCTGGAAGGCAAGGAGCCCCGCGAGTTCGCTTTCGATCCGAC
CGGCCAGTTCATGCTGTTCGCCAATCAGAAGAGCAACCAGATCGTGACCGTACGCCGTGATCCGCAGAGCGGCAAGATCG
GTGAAACGGTACAGAAATTCGATGCAGATGCACCTTCTTACCTGCGTTTTCTGACCGATAAGTAA

Upstream 100 bases:

>100_bases
CCCCTCCGATGAAGATGATTCCGCGCAGGATTGAGTAAATGCGGGCTGGCGCTGTCATAGACCCGACCGTGCCGTAACAG
GCATCAATAACCTCAACAAG

Downstream 100 bases:

>100_bases
TCCGCTTCGGCTCCAGCCCGCACGATACAAGTGCTGGGGCCGTTATCATTCTTGATGATATGGGTTAGTGCTACAAAAGA
TTTCTGCTGAACCACCCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MDAPMPHKFLPWLAIASAMSTFTLQAQAMPDTELLIGSYTQGKSEGIYRFAFDSETGMIGAKPLQVVKAENPSWLTVSRD
QRYLFAVNENGPGQKDVVGKVSSFAIDPKTRQITPINQVQSRGEEPTHSSLSYDGRYLFVANYAVNPDPGGALTVVPVGK
DGTLSEAVQVLPLGPGSKVNSERQMSSHVHLAVPTPDDKYVVTADLGADKLFVYHYDASQAKPLQPAKVPFVQLPGGSGP
RHTLFSADGKHAWLVLEMTAQVAVFDYHDGVFKQTQLVDMKNKGVDEKNGGGALHTSPDGKFLYVTNRGDANQVVVFRID
QASGKLEEIQRRSLEGKEPREFAFDPTGQFMLFANQKSNQIVTVRRDPQSGKIGETVQKFDADAPSYLRFLTDK

Sequences:

>Translated_394_residues
MDAPMPHKFLPWLAIASAMSTFTLQAQAMPDTELLIGSYTQGKSEGIYRFAFDSETGMIGAKPLQVVKAENPSWLTVSRD
QRYLFAVNENGPGQKDVVGKVSSFAIDPKTRQITPINQVQSRGEEPTHSSLSYDGRYLFVANYAVNPDPGGALTVVPVGK
DGTLSEAVQVLPLGPGSKVNSERQMSSHVHLAVPTPDDKYVVTADLGADKLFVYHYDASQAKPLQPAKVPFVQLPGGSGP
RHTLFSADGKHAWLVLEMTAQVAVFDYHDGVFKQTQLVDMKNKGVDEKNGGGALHTSPDGKFLYVTNRGDANQVVVFRID
QASGKLEEIQRRSLEGKEPREFAFDPTGQFMLFANQKSNQIVTVRRDPQSGKIGETVQKFDADAPSYLRFLTDK
>Mature_394_residues
MDAPMPHKFLPWLAIASAMSTFTLQAQAMPDTELLIGSYTQGKSEGIYRFAFDSETGMIGAKPLQVVKAENPSWLTVSRD
QRYLFAVNENGPGQKDVVGKVSSFAIDPKTRQITPINQVQSRGEEPTHSSLSYDGRYLFVANYAVNPDPGGALTVVPVGK
DGTLSEAVQVLPLGPGSKVNSERQMSSHVHLAVPTPDDKYVVTADLGADKLFVYHYDASQAKPLQPAKVPFVQLPGGSGP
RHTLFSADGKHAWLVLEMTAQVAVFDYHDGVFKQTQLVDMKNKGVDEKNGGGALHTSPDGKFLYVTNRGDANQVVVFRID
QASGKLEEIQRRSLEGKEPREFAFDPTGQFMLFANQKSNQIVTVRRDPQSGKIGETVQKFDADAPSYLRFLTDK

Specific function: Unknown

COG id: COG2706

COG function: function code G; 3-carboxymuconate cyclase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cycloisomerase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786983, Length=327, Percent_Identity=25.3822629969419, Blast_Score=84, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011048
- InterPro:   IPR019405
- InterPro:   IPR015943 [H]

Pfam domain/function: PF10282 DUF2394 [H]

EC number: NA

Molecular weight: Translated: 43149; Mature: 43149

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAPMPHKFLPWLAIASAMSTFTLQAQAMPDTELLIGSYTQGKSEGIYRFAFDSETGMIG
CCCCCCCHHHHHHHHHHHHHEEEEEEECCCCCEEEEEECCCCCCCCEEEEEECCCCCCCC
AKPLQVVKAENPSWLTVSRDQRYLFAVNENGPGQKDVVGKVSSFAIDPKTRQITPINQVQ
CCCEEEEECCCCCEEEEECCCEEEEEECCCCCCCHHHHCCHHHEEECCCCCEECCHHHHH
SRGEEPTHSSLSYDGRYLFVANYAVNPDPGGALTVVPVGKDGTLSEAVQVLPLGPGSKVN
HCCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEEEECCCCCCHHHEEEEEECCCCCCCC
SERQMSSHVHLAVPTPDDKYVVTADLGADKLFVYHYDASQAKPLQPAKVPFVQLPGGSGP
CCHHHHCEEEEEECCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCEEECCCCCCC
RHTLFSADGKHAWLVLEMTAQVAVFDYHDGVFKQTQLVDMKNKGVDEKNGGGALHTSPDG
CCEEEECCCCEEEEEEEEEEEEEEEECCCCCCCCEEEEEHHHCCCCCCCCCCEEEECCCC
KFLYVTNRGDANQVVVFRIDQASGKLEEIQRRSLEGKEPREFAFDPTGQFMLFANQKSNQ
CEEEEECCCCCCEEEEEEEECCCCHHHHHHHHCCCCCCCCCEECCCCCCEEEEEECCCCE
IVTVRRDPQSGKIGETVQKFDADAPSYLRFLTDK
EEEEEECCCCCCHHHHHHHHCCCCCHHHHHCCCC
>Mature Secondary Structure
MDAPMPHKFLPWLAIASAMSTFTLQAQAMPDTELLIGSYTQGKSEGIYRFAFDSETGMIG
CCCCCCCHHHHHHHHHHHHHEEEEEEECCCCCEEEEEECCCCCCCCEEEEEECCCCCCCC
AKPLQVVKAENPSWLTVSRDQRYLFAVNENGPGQKDVVGKVSSFAIDPKTRQITPINQVQ
CCCEEEEECCCCCEEEEECCCEEEEEECCCCCCCHHHHCCHHHEEECCCCCEECCHHHHH
SRGEEPTHSSLSYDGRYLFVANYAVNPDPGGALTVVPVGKDGTLSEAVQVLPLGPGSKVN
HCCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEEEECCCCCCHHHEEEEEECCCCCCCC
SERQMSSHVHLAVPTPDDKYVVTADLGADKLFVYHYDASQAKPLQPAKVPFVQLPGGSGP
CCHHHHCEEEEEECCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCEEECCCCCCC
RHTLFSADGKHAWLVLEMTAQVAVFDYHDGVFKQTQLVDMKNKGVDEKNGGGALHTSPDG
CCEEEECCCCEEEEEEEEEEEEEEEECCCCCCCCEEEEEHHHCCCCCCCCCCEEEECCCC
KFLYVTNRGDANQVVVFRIDQASGKLEEIQRRSLEGKEPREFAFDPTGQFMLFANQKSNQ
CEEEEECCCCCCEEEEEEEECCCCHHHHHHHHCCCCCCCCCEECCCCCCEEEEEECCCCE
IVTVRRDPQSGKIGETVQKFDADAPSYLRFLTDK
EEEEEECCCCCCHHHHHHHHCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]