| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is yjfK [C]
Identifier: 66044940
GI number: 66044940
Start: 1902902
End: 1903567
Strand: Direct
Name: yjfK [C]
Synonym: Psyr_1695
Alternate gene names: 66044940
Gene position: 1902902-1903567 (Clockwise)
Preceding gene: 66044939
Following gene: 66044941
Centisome position: 31.23
GC content: 59.91
Gene sequence:
>666_bases ATGAGTTGGTTCAAACGGGCCATGGGCCTGGAAGCCCCCAAGGCATCAGGCCGGGACGGCACACAACCGGTCAGCACGGT CAGTCCGCTGGGGCTGGCCTCCGGACGGATGCTGTGCCTGGACAGTTCGCTGAAACTGTTGCTCGACGGTCACTCGGAAG TGGTCGTTCCGGGCGATGAAAAGGTCTGGTCCGTGGGGCATATCGATCTCGGCCAGTCCATGGCGCTGCATCGTTTCTAC CTCGATAACGAGGACTATTTTCTGCAAGTGGTCAGCACTGGCCCCAACCCGGAAGACGTACAGGACATCATCCTGTTCGG CTACTACGGCGCCGAGCCGATCACCAGCGAGGATGAGTTGCTGCGCCTGACCGGCCCGTCGTCGAAGATCGGCCTGCCGA CCTACGAGCACGATGGCGAGGTCTTCGAGCGGCAATGGGGGACTTCACCCGGCCAGACCGAGCTGACGCCACTCGATGAA AACATCGTCAGTCCTGACGCGACTTATCGTGTCAAGCACCTGAGCATGCTGTACGCCCGCGAAACAGGACTGATCAACCG CCGTGAGTTTCTGCTGTTTTCCGTAGAGGAAGACGAGGAGGGCAGCATCACGCTCACCACGGCGGTCGGCATAACGCTGC AATCCACTGACATCAACGTTCTTTGA
Upstream 100 bases:
>100_bases GCTGGCGCAGAAATGAGTCAGTCTCGCGCTTGCAGGCAGTGCGCCTGTTGCGCTTGAAGAGCGTTATATATCGTCACCCG TCACTGCAAGGAAACGGATT
Downstream 100 bases:
>100_bases CAAGGAAATCCTCATGATCGACGCGCTGCGTATGTCCCTCAATGCCACTGCTGTATTCGGCTTCGTCATGTACATCCTGG TGGCGGCGATTCTGTTCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MSWFKRAMGLEAPKASGRDGTQPVSTVSPLGLASGRMLCLDSSLKLLLDGHSEVVVPGDEKVWSVGHIDLGQSMALHRFY LDNEDYFLQVVSTGPNPEDVQDIILFGYYGAEPITSEDELLRLTGPSSKIGLPTYEHDGEVFERQWGTSPGQTELTPLDE NIVSPDATYRVKHLSMLYARETGLINRREFLLFSVEEDEEGSITLTTAVGITLQSTDINVL
Sequences:
>Translated_221_residues MSWFKRAMGLEAPKASGRDGTQPVSTVSPLGLASGRMLCLDSSLKLLLDGHSEVVVPGDEKVWSVGHIDLGQSMALHRFY LDNEDYFLQVVSTGPNPEDVQDIILFGYYGAEPITSEDELLRLTGPSSKIGLPTYEHDGEVFERQWGTSPGQTELTPLDE NIVSPDATYRVKHLSMLYARETGLINRREFLLFSVEEDEEGSITLTTAVGITLQSTDINVL >Mature_220_residues SWFKRAMGLEAPKASGRDGTQPVSTVSPLGLASGRMLCLDSSLKLLLDGHSEVVVPGDEKVWSVGHIDLGQSMALHRFYL DNEDYFLQVVSTGPNPEDVQDIILFGYYGAEPITSEDELLRLTGPSSKIGLPTYEHDGEVFERQWGTSPGQTELTPLDEN IVSPDATYRVKHLSMLYARETGLINRREFLLFSVEEDEEGSITLTTAVGITLQSTDINVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24364; Mature: 24232
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWFKRAMGLEAPKASGRDGTQPVSTVSPLGLASGRMLCLDSSLKLLLDGHSEVVVPGDE CCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCEEEECCCC KVWSVGHIDLGQSMALHRFYLDNEDYFLQVVSTGPNPEDVQDIILFGYYGAEPITSEDEL CEEEEEEECCCCCEEEEEEEECCCCEEEEEEECCCCHHHHEEEEEEEEECCCCCCCCCCE LRLTGPSSKIGLPTYEHDGEVFERQWGTSPGQTELTPLDENIVSPDATYRVKHLSMLYAR EEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHH ETGLINRREFLLFSVEEDEEGSITLTTAVGITLQSTDINVL HCCCCCCCEEEEEEECCCCCCCEEEEEEEEEEEECCCEECC >Mature Secondary Structure SWFKRAMGLEAPKASGRDGTQPVSTVSPLGLASGRMLCLDSSLKLLLDGHSEVVVPGDE CHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCEEEECCCC KVWSVGHIDLGQSMALHRFYLDNEDYFLQVVSTGPNPEDVQDIILFGYYGAEPITSEDEL CEEEEEEECCCCCEEEEEEEECCCCEEEEEEECCCCHHHHEEEEEEEEECCCCCCCCCCE LRLTGPSSKIGLPTYEHDGEVFERQWGTSPGQTELTPLDENIVSPDATYRVKHLSMLYAR EEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHH ETGLINRREFLLFSVEEDEEGSITLTTAVGITLQSTDINVL HCCCCCCCEEEEEEECCCCCCCEEEEEEEEEEEECCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA