| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is 66044903
Identifier: 66044903
GI number: 66044903
Start: 1861713
End: 1862315
Strand: Direct
Name: 66044903
Synonym: Psyr_1658
Alternate gene names: NA
Gene position: 1861713-1862315 (Clockwise)
Preceding gene: 66044902
Following gene: 66044904
Centisome position: 30.55
GC content: 60.36
Gene sequence:
>603_bases ATGCGTAGCCTGGTTATGCTGCTCGCGCTTCTGGCGTTGAGTGGCTGCATGAAAGTCAGTGACATGGGCGAAGGTGTTCG CGAGCAATTCAGCGATGCAGGTCTGCTCGACCATAGCGAAACCCGTCGTACTGCCAACTGGCGCGTGCAGCCTGACTCGT TCATTTACATCGCTCAGGGCGCCTTCGTACCGCCGGGCAACGCCTATCCGCGGCCTAACGTGGTGGCTGAAGAAGCCTTC AAGGGCTTTATCGAGTACTTCCCGATGGTCCGTCGTGCCCGCGGCCCGCTGGGGCTGGATGAAGCCATGGTCGAGGCGCG TGCTGCGGGCGCGCATTATTTGCTCTACGCACGTTTCGCCAAGGCTGACGACCGCATCGGCAATGGCGATCAATGGGCCG ATCAGGAAGCGGTGGACCGTCTGGGTGTCGACAGCGGTGTCATTCAGCTGATGCTGATCGAGACCGGGACCCGTTACCTC ATCGACAGCGCACGCATTCGCAGCCGTGGCGGATTGCTGACGCTTTACGACAAAAGCCCCGAGGATTTGCTGGGTCCGCC GCTTGAGGACTACGCTCGTACCTTATTGGGTGTCGAACGCTAG
Upstream 100 bases:
>100_bases CAGCTTCAAGGCTTTGGCGTTGGCTGCGCCAGAGATGGCGCGGAAGCTGCATCCGACGACCATTCGCCGGTTTTCCGTCA CCGGTATTTGGGAGGGGATA
Downstream 100 bases:
>100_bases AGCCTAAAGCTCGCATCAGGAGAATGGAGTGACCGATTCAAACAAGGCGGGTGATCTGTTCGCGCAGATCCCCAAAACCA AAGGGTTGCCGCCTGTTCAT
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MRSLVMLLALLALSGCMKVSDMGEGVREQFSDAGLLDHSETRRTANWRVQPDSFIYIAQGAFVPPGNAYPRPNVVAEEAF KGFIEYFPMVRRARGPLGLDEAMVEARAAGAHYLLYARFAKADDRIGNGDQWADQEAVDRLGVDSGVIQLMLIETGTRYL IDSARIRSRGGLLTLYDKSPEDLLGPPLEDYARTLLGVER
Sequences:
>Translated_200_residues MRSLVMLLALLALSGCMKVSDMGEGVREQFSDAGLLDHSETRRTANWRVQPDSFIYIAQGAFVPPGNAYPRPNVVAEEAF KGFIEYFPMVRRARGPLGLDEAMVEARAAGAHYLLYARFAKADDRIGNGDQWADQEAVDRLGVDSGVIQLMLIETGTRYL IDSARIRSRGGLLTLYDKSPEDLLGPPLEDYARTLLGVER >Mature_200_residues MRSLVMLLALLALSGCMKVSDMGEGVREQFSDAGLLDHSETRRTANWRVQPDSFIYIAQGAFVPPGNAYPRPNVVAEEAF KGFIEYFPMVRRARGPLGLDEAMVEARAAGAHYLLYARFAKADDRIGNGDQWADQEAVDRLGVDSGVIQLMLIETGTRYL IDSARIRSRGGLLTLYDKSPEDLLGPPLEDYARTLLGVER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22139; Mature: 22139
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSLVMLLALLALSGCMKVSDMGEGVREQFSDAGLLDHSETRRTANWRVQPDSFIYIAQG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCEEECCCCEEEEECC AFVPPGNAYPRPNVVAEEAFKGFIEYFPMVRRARGPLGLDEAMVEARAAGAHYLLYARFA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHH KADDRIGNGDQWADQEAVDRLGVDSGVIQLMLIETGTRYLIDSARIRSRGGLLTLYDKSP HHCCCCCCCCCCCCHHHHHHHCCCCHHEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCC EDLLGPPLEDYARTLLGVER HHHCCCCHHHHHHHHHCCCC >Mature Secondary Structure MRSLVMLLALLALSGCMKVSDMGEGVREQFSDAGLLDHSETRRTANWRVQPDSFIYIAQG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCEEECCCCEEEEECC AFVPPGNAYPRPNVVAEEAFKGFIEYFPMVRRARGPLGLDEAMVEARAAGAHYLLYARFA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHH KADDRIGNGDQWADQEAVDRLGVDSGVIQLMLIETGTRYLIDSARIRSRGGLLTLYDKSP HHCCCCCCCCCCCCHHHHHHHCCCCHHEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCC EDLLGPPLEDYARTLLGVER HHHCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA