| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is cysW [C]
Identifier: 66044848
GI number: 66044848
Start: 1802565
End: 1803362
Strand: Reverse
Name: cysW [C]
Synonym: Psyr_1603
Alternate gene names: 66044848
Gene position: 1803362-1802565 (Counterclockwise)
Preceding gene: 66044849
Following gene: 66044847
Centisome position: 29.59
GC content: 60.4
Gene sequence:
>798_bases ATGTCACGCGTTGAACGAGGGCCTGCGAGCATTTATCACAAGACGGTGGTCTGCCTGCTGTTCCTGATCCTGTTGCTGCC GCTGGCCGGCACCTTCCTGTACTCGATCGCGACCAGCTGGTCGGCGACCATTCTGCCCAGTGGCCTGACCTTCAAATGGT ACGTGGCGCTGTGGAGCGACCCACGCTTTCTGACGGCGTTCGGCCAGTCACTGCTGGTCTGCGTCGGCGCACTGATCCTT TCGGTGGTGCTGATTCTGCCCCTGCTGTTCGTCGTGCATTACTACTTTCCGCGCCTCGACGGGCTGATGAACATCCTCAT CCTGCTGCCGTTTGCCGTGCCACCCGTGGTTTCCTCGGTCGGCCTGCTGCAGCTGTATGGCTCAGGCCCCATGGCGATGG TCGGCACACCGTGGATTCTGATCGGCTGTTACTTCACCGTCGCCCTGCCCTTCATGTACCGCGCCATCACCAACAACCTG CAGGCCATCAACCTGACAGACCTGATGGACGCCGCCCGGTTGCTCGGCGCCAGCACCTGGCAGGCGGCGTTCATGGTGGT GCTGCCCAACCTGCGCAAGGGCCTGATGATTGCCCTGCTGCTGTCGTTCTCGTTCCTGTTCGGCGAATTCGTATTCGCCA ACCTGCTGGTCGGCACGCGCTATGAAACCCTGCAGGTGTACCTCAACAACATGCGCAACAGCAGCGGTCACTTCAACAGC GCGCTGGTGATTTCCTATTTCCTCTTCGTGCTGGTGCTGACCTGGGCCGCCAATCGACTGAACAAGGACAAAGACTGA
Upstream 100 bases:
>100_bases ACGCTGGACCCGAACATGGCCAGCGCGCTGGCGATGATTCTGGTCGGTCTCATGACCCTGGTCACGGTGGTCCATCAGTG GCTGTTGAGAAGGAGCTACC
Downstream 100 bases:
>100_bases GATGAGTTTTGTCAGCATTGAAAACCTGCAGAAAAGCTACGCCAGCACGTCAGTGTTCAGCGACATCAACTGCAGCATTG CGAAAGGCGAGTTCGTTACC
Product: binding-protein dependent transport system inner membrane protein
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: ABC Transporter Permease; Permease Of ABC Transporter; ABC Transporter; ABC-Type Transporter Permease Component; Polyamine ABC Transporter Permease Protein; Transmembrane Component Of ABC Transporter; ABC Transporter Membrane Protein; ABC Transport System Permease Protein; ABC-Type Transport System Permease Protein; Spermidine/Putrescine ABC Transporter Permease Component; ABC Transporter Integral Membrane Subunit; ABC Transporter Inner Membrane Protein; ABC Transport System Permease Component; Spermidine/Putrescine Abc Transporter Permease Protein; ABC Transporter, Permease Component Fragment; ABC Transporter Permease Component
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MSRVERGPASIYHKTVVCLLFLILLLPLAGTFLYSIATSWSATILPSGLTFKWYVALWSDPRFLTAFGQSLLVCVGALIL SVVLILPLLFVVHYYFPRLDGLMNILILLPFAVPPVVSSVGLLQLYGSGPMAMVGTPWILIGCYFTVALPFMYRAITNNL QAINLTDLMDAARLLGASTWQAAFMVVLPNLRKGLMIALLLSFSFLFGEFVFANLLVGTRYETLQVYLNNMRNSSGHFNS ALVISYFLFVLVLTWAANRLNKDKD
Sequences:
>Translated_265_residues MSRVERGPASIYHKTVVCLLFLILLLPLAGTFLYSIATSWSATILPSGLTFKWYVALWSDPRFLTAFGQSLLVCVGALIL SVVLILPLLFVVHYYFPRLDGLMNILILLPFAVPPVVSSVGLLQLYGSGPMAMVGTPWILIGCYFTVALPFMYRAITNNL QAINLTDLMDAARLLGASTWQAAFMVVLPNLRKGLMIALLLSFSFLFGEFVFANLLVGTRYETLQVYLNNMRNSSGHFNS ALVISYFLFVLVLTWAANRLNKDKD >Mature_264_residues SRVERGPASIYHKTVVCLLFLILLLPLAGTFLYSIATSWSATILPSGLTFKWYVALWSDPRFLTAFGQSLLVCVGALILS VVLILPLLFVVHYYFPRLDGLMNILILLPFAVPPVVSSVGLLQLYGSGPMAMVGTPWILIGCYFTVALPFMYRAITNNLQ AINLTDLMDAARLLGASTWQAAFMVVLPNLRKGLMIALLLSFSFLFGEFVFANLLVGTRYETLQVYLNNMRNSSGHFNSA LVISYFLFVLVLTWAANRLNKDKD
Specific function: Part Of The Abc Transporter Complex Cysawtp (Tc 3.A.1.6.1) Involved In Sulfate/Thiosulfate Import. Probably Responsible For The Translocation Of The Substrate Across The Membrane. [C]
COG id: COG1177
COG function: function code E; ABC-type spermidine/putrescine transport system, permease component II
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29463; Mature: 29331
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRVERGPASIYHKTVVCLLFLILLLPLAGTFLYSIATSWSATILPSGLTFKWYVALWSD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCEEEEEEEECC PRFLTAFGQSLLVCVGALILSVVLILPLLFVVHYYFPRLDGLMNILILLPFAVPPVVSSV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLLQLYGSGPMAMVGTPWILIGCYFTVALPFMYRAITNNLQAINLTDLMDAARLLGASTW HHHHEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHCCHHH QAAFMVVLPNLRKGLMIALLLSFSFLFGEFVFANLLVGTRYETLQVYLNNMRNSSGHFNS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHH ALVISYFLFVLVLTWAANRLNKDKD HHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SRVERGPASIYHKTVVCLLFLILLLPLAGTFLYSIATSWSATILPSGLTFKWYVALWSD CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCEEEEEEEECC PRFLTAFGQSLLVCVGALILSVVLILPLLFVVHYYFPRLDGLMNILILLPFAVPPVVSSV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLLQLYGSGPMAMVGTPWILIGCYFTVALPFMYRAITNNLQAINLTDLMDAARLLGASTW HHHHEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHCCHHH QAAFMVVLPNLRKGLMIALLLSFSFLFGEFVFANLLVGTRYETLQVYLNNMRNSSGHFNS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHH ALVISYFLFVLVLTWAANRLNKDKD HHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA